| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763728
Identifier: 108763728
GI number: 108763728
Start: 5241267
End: 5241965
Strand: Reverse
Name: 108763728
Synonym: MXAN_4278
Alternate gene names: NA
Gene position: 5241965-5241267 (Counterclockwise)
Preceding gene: 108763517
Following gene: 108759224
Centisome position: 57.35
GC content: 67.24
Gene sequence:
>699_bases ATGTCCACGTCCATCAATTCGAGCCGCCGGGGAGCATCTTCCTCCTACCTGATTCGCAAGGGGGACACCCTCTCGGAGCT TGCCGCTCGCTTCAAGACGTCGGTGAAGGAGTTGGCGCGCATCAACAATATCGCCAATCCAGACCTCATCTACGCGGGTG CCACGCTGCGCCTCCCCGGGAGCGCTGGCGGCCGCGCCACGGGCCACAGCGGCAAGGATTCCTTCGACTCTGGCAAGAGC GGTCCGCGGGGCTCCGGCGGTGCGTCGGGCGGCGGAGAGGTCAGCGGGAGCGGCGGTGTGGCCCCGGGCCAGGCGACCCC CGCGATGCGCAGGCTCGCCGAGGCGGGCCGCCAGGCCGCGCTGGGCATGGGCGGGTACAACAGCCAGGGCCTGTGCGCCA CGGGTGTGAGCCGGGCCATCCAGAACGCCTTCGGCATCAAGGTCTGGGGCAACGGCAACCAGATTGACAACAACCTGCCG CGCGACAAGTTCAAGCAGGTCAACATGTCGCTCGAGCAGGCGCTGAAGATTCCGGGCCTCGTCCTCACCTGGGAGAGCAC CTCCACTCGACTGGGCAGCATCTACGGGCACACGGCCATCACCACCGGCGACGGCCACTCGTCCGCCAGCGACTTCATCG AGCGCAACACGACCAACAGCGGCCGTACCGGGTTCAAGGTCTTCATGCCCCTCATCTAG
Upstream 100 bases:
>100_bases GCGATTTACGGCCCCTCATTTTCCTGCGGATTCCAAGATTTTGGGAAACCGGACGCAACTCCGGGAGGGCCGTGACGACA ATGGGAACCAGGAGACCTGA
Downstream 100 bases:
>100_bases TTCCGCCGCACGGTGGAACCTGTCGTCTCATCGCCTCCGGGGCATTCGACCGGGGGCGATGTCGTGTCCGGGATTCAAGT TCACGGGGGACCGGCGCCTG
Product: LysM domain-containing protein
Products: NA
Alternate protein names: Penicillin-Resistant Dd-Carboxypeptidase-Like Protein
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSTSINSSRRGASSSYLIRKGDTLSELAARFKTSVKELARINNIANPDLIYAGATLRLPGSAGGRATGHSGKDSFDSGKS GPRGSGGASGGGEVSGSGGVAPGQATPAMRRLAEAGRQAALGMGGYNSQGLCATGVSRAIQNAFGIKVWGNGNQIDNNLP RDKFKQVNMSLEQALKIPGLVLTWESTSTRLGSIYGHTAITTGDGHSSASDFIERNTTNSGRTGFKVFMPLI
Sequences:
>Translated_232_residues MSTSINSSRRGASSSYLIRKGDTLSELAARFKTSVKELARINNIANPDLIYAGATLRLPGSAGGRATGHSGKDSFDSGKS GPRGSGGASGGGEVSGSGGVAPGQATPAMRRLAEAGRQAALGMGGYNSQGLCATGVSRAIQNAFGIKVWGNGNQIDNNLP RDKFKQVNMSLEQALKIPGLVLTWESTSTRLGSIYGHTAITTGDGHSSASDFIERNTTNSGRTGFKVFMPLI >Mature_231_residues STSINSSRRGASSSYLIRKGDTLSELAARFKTSVKELARINNIANPDLIYAGATLRLPGSAGGRATGHSGKDSFDSGKSG PRGSGGASGGGEVSGSGGVAPGQATPAMRRLAEAGRQAALGMGGYNSQGLCATGVSRAIQNAFGIKVWGNGNQIDNNLPR DKFKQVNMSLEQALKIPGLVLTWESTSTRLGSIYGHTAITTGDGHSSASDFIERNTTNSGRTGFKVFMPLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23939; Mature: 23808
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSINSSRRGASSSYLIRKGDTLSELAARFKTSVKELARINNIANPDLIYAGATLRLPG CCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCC SAGGRATGHSGKDSFDSGKSGPRGSGGASGGGEVSGSGGVAPGQATPAMRRLAEAGRQAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHE LGMGGYNSQGLCATGVSRAIQNAFGIKVWGNGNQIDNNLPRDKFKQVNMSLEQALKIPGL ECCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE VLTWESTSTRLGSIYGHTAITTGDGHSSASDFIERNTTNSGRTGFKVFMPLI EEEECCCCCHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCC >Mature Secondary Structure STSINSSRRGASSSYLIRKGDTLSELAARFKTSVKELARINNIANPDLIYAGATLRLPG CCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCC SAGGRATGHSGKDSFDSGKSGPRGSGGASGGGEVSGSGGVAPGQATPAMRRLAEAGRQAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHE LGMGGYNSQGLCATGVSRAIQNAFGIKVWGNGNQIDNNLPRDKFKQVNMSLEQALKIPGL ECCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE VLTWESTSTRLGSIYGHTAITTGDGHSSASDFIERNTTNSGRTGFKVFMPLI EEEECCCCCHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA