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The map label for this gene is ssb [H]

Identifier: 108763668

GI number: 108763668

Start: 1247763

End: 1248260

Strand: Direct

Name: ssb [H]

Synonym: MXAN_1071

Alternate gene names: 108763668

Gene position: 1247763-1248260 (Clockwise)

Preceding gene: 108759041

Following gene: 108757186

Centisome position: 13.65

GC content: 68.07

Gene sequence:

>498_bases
ATGGCTGGAGGCGTGAACAAGGTCATCCTCATCGGCAACCTCGGGGCGGACCCGGAGGTCCGGTTCACTCCCGGCGGTCA
GGCGGTGGCGAACTTCCGCATCGCCACCAGCGAGAGCTGGGTCGACAAGAATGGCCAGAAGCAGGAGCGGACCGAGTGGC
ACCGCATCGTCGTCTGGGGAAAGCTCGCGGAGCTCTGCGGCGAGTACCTGAAGAAGGGACGGCAGTGCTACGTCGAGGGC
CGCCTGCAGACGCGCGAGTGGACGGACAAGGAGAACCGGAAGAACTACACCACCGAGGTGGTGGCCAACGCCGTGACGTT
CCTCGGCGGTGGTGGCCGTGACGCCGGAGACGGCATGGGCGGCGGGGGCGGGGGCGGTGGACGCCGGCAGTTCTCCCAGC
AGCGTGGGGGAGACAACAACGACTACGGTCAGCCGCCTCCGGACGACATGGGCGGTGGCCATGGCGGCGGCAACGGCGAC
GACGACATCCCCTTCTAG

Upstream 100 bases:

>100_bases
GTCAGTACCCACTGCTATAGGTGGGAATCAAACCCGGCGGGTGCGTCCGGGGTGTAACCGGTCCTCGGTGGACCGGTTCT
CGTGAGAAAGGAATGCAGTC

Downstream 100 bases:

>100_bases
GCCCGGCTGACGCCAGCGGCGCCCTGGAAATGAAACCGGCCGCTCCCCGGAAGTCTCGGGGGCGGCCGGTGTGCTTCGTG
CGCCTGGACTTCCAGGCCCG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYVEG
RLQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMGGGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGGNGD
DDIPF

Sequences:

>Translated_165_residues
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYVEG
RLQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMGGGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGGNGD
DDIPF
>Mature_164_residues
AGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWGKLAELCGEYLKKGRQCYVEGR
LQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMGGGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGGNGDD
DIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=121, Percent_Identity=32.2314049586777, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI1790494, Length=111, Percent_Identity=61.2612612612613, Blast_Score=141, Evalue=2e-35,
Organism=Drosophila melanogaster, GI85725234, Length=116, Percent_Identity=37.0689655172414, Blast_Score=73, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24647376, Length=116, Percent_Identity=37.0689655172414, Blast_Score=73, Evalue=7e-14,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17630; Mature: 17498

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWG
CCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCCHHCCCCCHHHHHHHHEEEHHH
KLAELCGEYLKKGRQCYVEGRLQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
GGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGGNGDDDIPF
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGGVNKVILIGNLGADPEVRFTPGGQAVANFRIATSESWVDKNGQKQERTEWHRIVVWG
CCCCCEEEEEECCCCCCCEEECCCCCEEEEEEEECCCCHHCCCCCHHHHHHHHEEEHHH
KLAELCGEYLKKGRQCYVEGRLQTREWTDKENRKNYTTEVVANAVTFLGGGGRDAGDGMG
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
GGGGGGGRRQFSQQRGGDNNDYGQPPPDDMGGGHGGGNGDDDIPF
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12700255 [H]