| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763588
Identifier: 108763588
GI number: 108763588
Start: 1063747
End: 1065525
Strand: Direct
Name: 108763588
Synonym: MXAN_0932
Alternate gene names: NA
Gene position: 1063747-1065525 (Clockwise)
Preceding gene: 108763135
Following gene: 108758118
Centisome position: 11.64
GC content: 75.66
Gene sequence:
>1779_bases ATGAGCCACCCGGTGAGTGGCCTCTCTGGAACGGACCCCTCGGAGGTCGCGCCCGCGCCCTCCCTGGCCCTGGTGACGGA GCGCCCCGCGCCGCTGGAGTTGACGACACGCGCGCTGGGCATGGGTCTGCTCATTGGTGGGCTGCTGGCCATCACCAATG TGTACATGGGGTTGAAGACGGGCTGGTGGGAGAGCGGCTCCGTCACCGCCGCGGTGCTGGGCTTCAGCGCCCTGGCCTCG GTGTCCCGCAGGCGTGGCGCGCCCTATACGCCGTTGGAGAACAACCTCACGCAGACGGCGGCGGCGGCCGTGGGGGCCAT GCCGGCGGCGGCGGGCCTCTTGGGCGCGTTGCCAGCGCTGGCGCTGCTGGGCACCTCCGTCCCGGGCTGGGGTGTGGCGG TGTGGAGCGTGGCGCTGGGGGTGTTGGGCGTGCTCGCCGCGCACCTGTTGCGGCGGCGGCTGGTAGCCCAGGAGGCCCTG CCGTTTCCCACCGGCATCGCCACCGCGGAGCTGATTACCGCGATGCACGCGTCCACGGGCGACACGGTCCGCGCGGGCCG TGGACGGCTGCTGGCGGGCGCGGGCGTGGCGGCGGTGGCGGTGACCGCCGCGCGGGATGCGTTCAAATGGCTGCCTGGGA TGACGGCGCTGCCCGGCACGCTGGCGGGCCTTCCCGCCGCGTCGCTGACGTGGGGCGTGGGGTGGAGCCCCATGCTGCTG GCCATTGGCATGATGACGGGGCCGCGCCTGGGCCTGAGCATGCTGGCGGGCGCGGCGGTGGCGTGGGGCCTGCTGGCGCC GGGGCTCGCGGGCATGGGTGCGCTGGCGGACACGCGCTACGAGACGCTCTCCGCCTGGCTCACGTGGCCGGGCGTGGGGC TGATGGTGGGCTCGGCCCTGGCGGCGCTGTTGGCGCAGGCGCGCGACTTCCTGAGCGCGGCGCGTGACGTGAGCAGCCTG GGGCGGGGCGCGGCGGTGCCGTCCTGGGCGCTGGGCGCGGGCCTGGCGGCGTGCGTGCTGGCGGTGGTGGTGGGCTCGGC GCTGTTCGGCCTCGGCGTGCCGTACATGCTGCTGGCGCTGGTACTGGTGCTGCCCCTGTGCGCGGTGTGCGCGCGCGGCG CGGGACAGGTGGACGTGTCCCCTGTGACGCAGATGGGGCAGGTGACGCAGGTCATCTTCGGCGCGCTGCTGCCGGGGGCC ATGGCGCCCAACGTCGCCGCGGGCGCCGTGGTGTCAGGCGCGGCCGCGCAGACGGGCGTCAGCATGTGGTCGCTCAAGGC GGGGCACCTGCTGGGGGCCTCCGCGCGCCACCAGCTCGCCGCGCAGCTCGTGGGCGTGCTGGCGGGCTCGGTGGTGGGCG TGCCGGTGTACCTGCTGCTGTCCAGGACGTACGGCCTGGGCTCGGAGGCGCTGCCCGCGCCCTTCGCCCATCAGTTCCGC GCGGTGGCGGAGGTGGCGGTGCGAGGGCTGGACGGGCTGCCGCCTCACGCGGCCCTGGCGGCCTGCGTGGCCGTGGGCGT GGGCGCGCTGCTCACCTGGGTGTCCCGTGGCCGGGCGGCGCGGTGGCTGCCGCTGCCGGTGGCGCTGGGCATCGGCTTCA TCCTGCCGGCCTACTACGCGGTGACGCTGTGCCTGGGCGCGCTGGGACTGGCGGCGGCGCGTTGGCGCTGGCCCCAGGCG GCGGACCGGAACACGTCCACGCTGGCGGCGGGCGCCATCGCGGGCGAGTCGCTGGCGGGCGTGCTCATCGCCGCGTTGAT GGCCTTCGGCCTCACGTAG
Upstream 100 bases:
>100_bases CGGTGTCCTTCCTGCGTGACGTGCCCAACGCCAAGATTGCCAAGCCGCTGGACCTGATGCAGTTGCGCGAGCTCGTGGGC CGCTCCGCCGAGGCGGGGCG
Downstream 100 bases:
>100_bases TCGACGAAGACTCGTGCACCTTCTCCAGGGAGCGGCGGATGCGGCCCTCCATGAGGTTGGGCACGTGCCGCGCGCGCTCC AGAGCCTCGCGCAGCACGCG
Product: OPT family oligopeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MSHPVSGLSGTDPSEVAPAPSLALVTERPAPLELTTRALGMGLLIGGLLAITNVYMGLKTGWWESGSVTAAVLGFSALAS VSRRRGAPYTPLENNLTQTAAAAVGAMPAAAGLLGALPALALLGTSVPGWGVAVWSVALGVLGVLAAHLLRRRLVAQEAL PFPTGIATAELITAMHASTGDTVRAGRGRLLAGAGVAAVAVTAARDAFKWLPGMTALPGTLAGLPAASLTWGVGWSPMLL AIGMMTGPRLGLSMLAGAAVAWGLLAPGLAGMGALADTRYETLSAWLTWPGVGLMVGSALAALLAQARDFLSAARDVSSL GRGAAVPSWALGAGLAACVLAVVVGSALFGLGVPYMLLALVLVLPLCAVCARGAGQVDVSPVTQMGQVTQVIFGALLPGA MAPNVAAGAVVSGAAAQTGVSMWSLKAGHLLGASARHQLAAQLVGVLAGSVVGVPVYLLLSRTYGLGSEALPAPFAHQFR AVAEVAVRGLDGLPPHAALAACVAVGVGALLTWVSRGRAARWLPLPVALGIGFILPAYYAVTLCLGALGLAAARWRWPQA ADRNTSTLAAGAIAGESLAGVLIAALMAFGLT
Sequences:
>Translated_592_residues MSHPVSGLSGTDPSEVAPAPSLALVTERPAPLELTTRALGMGLLIGGLLAITNVYMGLKTGWWESGSVTAAVLGFSALAS VSRRRGAPYTPLENNLTQTAAAAVGAMPAAAGLLGALPALALLGTSVPGWGVAVWSVALGVLGVLAAHLLRRRLVAQEAL PFPTGIATAELITAMHASTGDTVRAGRGRLLAGAGVAAVAVTAARDAFKWLPGMTALPGTLAGLPAASLTWGVGWSPMLL AIGMMTGPRLGLSMLAGAAVAWGLLAPGLAGMGALADTRYETLSAWLTWPGVGLMVGSALAALLAQARDFLSAARDVSSL GRGAAVPSWALGAGLAACVLAVVVGSALFGLGVPYMLLALVLVLPLCAVCARGAGQVDVSPVTQMGQVTQVIFGALLPGA MAPNVAAGAVVSGAAAQTGVSMWSLKAGHLLGASARHQLAAQLVGVLAGSVVGVPVYLLLSRTYGLGSEALPAPFAHQFR AVAEVAVRGLDGLPPHAALAACVAVGVGALLTWVSRGRAARWLPLPVALGIGFILPAYYAVTLCLGALGLAAARWRWPQA ADRNTSTLAAGAIAGESLAGVLIAALMAFGLT >Mature_591_residues SHPVSGLSGTDPSEVAPAPSLALVTERPAPLELTTRALGMGLLIGGLLAITNVYMGLKTGWWESGSVTAAVLGFSALASV SRRRGAPYTPLENNLTQTAAAAVGAMPAAAGLLGALPALALLGTSVPGWGVAVWSVALGVLGVLAAHLLRRRLVAQEALP FPTGIATAELITAMHASTGDTVRAGRGRLLAGAGVAAVAVTAARDAFKWLPGMTALPGTLAGLPAASLTWGVGWSPMLLA IGMMTGPRLGLSMLAGAAVAWGLLAPGLAGMGALADTRYETLSAWLTWPGVGLMVGSALAALLAQARDFLSAARDVSSLG RGAAVPSWALGAGLAACVLAVVVGSALFGLGVPYMLLALVLVLPLCAVCARGAGQVDVSPVTQMGQVTQVIFGALLPGAM APNVAAGAVVSGAAAQTGVSMWSLKAGHLLGASARHQLAAQLVGVLAGSVVGVPVYLLLSRTYGLGSEALPAPFAHQFRA VAEVAVRGLDGLPPHAALAACVAVGVGALLTWVSRGRAARWLPLPVALGIGFILPAYYAVTLCLGALGLAAARWRWPQAA DRNTSTLAAGAIAGESLAGVLIAALMAFGLT
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321324, Length=706, Percent_Identity=24.7875354107649, Blast_Score=149, Evalue=9e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 58996; Mature: 58865
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPVSGLSGTDPSEVAPAPSLALVTERPAPLELTTRALGMGLLIGGLLAITNVYMGLKT CCCCCCCCCCCCCHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GWWESGSVTAAVLGFSALASVSRRRGAPYTPLENNLTQTAAAAVGAMPAAAGLLGALPAL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALLGTSVPGWGVAVWSVALGVLGVLAAHLLRRRLVAQEALPFPTGIATAELITAMHASTG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC DTVRAGRGRLLAGAGVAAVAVTAARDAFKWLPGMTALPGTLAGLPAASLTWGVGWSPMLL CCEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCHHHHH AIGMMTGPRLGLSMLAGAAVAWGLLAPGLAGMGALADTRYETLSAWLTWPGVGLMVGSAL HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHH AALLAQARDFLSAARDVSSLGRGAAVPSWALGAGLAACVLAVVVGSALFGLGVPYMLLAL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VLVLPLCAVCARGAGQVDVSPVTQMGQVTQVIFGALLPGAMAPNVAAGAVVSGAAAQTGV HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHCC SMWSLKAGHLLGASARHQLAAQLVGVLAGSVVGVPVYLLLSRTYGLGSEALPAPFAHQFR HHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AVAEVAVRGLDGLPPHAALAACVAVGVGALLTWVSRGRAARWLPLPVALGIGFILPAYYA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VTLCLGALGLAAARWRWPQAADRNTSTLAAGAIAGESLAGVLIAALMAFGLT HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHPVSGLSGTDPSEVAPAPSLALVTERPAPLELTTRALGMGLLIGGLLAITNVYMGLKT CCCCCCCCCCCCHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GWWESGSVTAAVLGFSALASVSRRRGAPYTPLENNLTQTAAAAVGAMPAAAGLLGALPAL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALLGTSVPGWGVAVWSVALGVLGVLAAHLLRRRLVAQEALPFPTGIATAELITAMHASTG HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC DTVRAGRGRLLAGAGVAAVAVTAARDAFKWLPGMTALPGTLAGLPAASLTWGVGWSPMLL CCEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCHHHHH AIGMMTGPRLGLSMLAGAAVAWGLLAPGLAGMGALADTRYETLSAWLTWPGVGLMVGSAL HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHH AALLAQARDFLSAARDVSSLGRGAAVPSWALGAGLAACVLAVVVGSALFGLGVPYMLLAL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VLVLPLCAVCARGAGQVDVSPVTQMGQVTQVIFGALLPGAMAPNVAAGAVVSGAAAQTGV HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHCC SMWSLKAGHLLGASARHQLAAQLVGVLAGSVVGVPVYLLLSRTYGLGSEALPAPFAHQFR HHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AVAEVAVRGLDGLPPHAALAACVAVGVGALLTWVSRGRAARWLPLPVALGIGFILPAYYA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VTLCLGALGLAAARWRWPQAADRNTSTLAAGAIAGESLAGVLIAALMAFGLT HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]