| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is fruA [H]
Identifier: 108763554
GI number: 108763554
Start: 3654152
End: 3654841
Strand: Direct
Name: fruA [H]
Synonym: MXAN_3117
Alternate gene names: 108763554
Gene position: 3654152-3654841 (Clockwise)
Preceding gene: 108759216
Following gene: 108759622
Centisome position: 39.98
GC content: 68.7
Gene sequence:
>690_bases ATGGCAACCAATCAAGCAGCGATTCGTGTATCGATTCTCGAAGGACCGTGGGCGGCCTGGCAGGGCCTGGCCGACGGGCT CCGTGGTGAAGGCGTGCAGGTCTCCTCGGTGACGAGGGACGTGCGCCTGTTCCTCGACAGCCTGGGGACAGACCCGCCGC AGGTCGCGGTGATGGACGTGGAGGGCGACAGCGAGGCCGCCGTGGGCTGCTCCGTCACGGAAGGCATCAATCTCCTGCGG GAGGCGCGCAAGCGCCGGCTGGAGGTGCGGATGCTGCTGCTCTCCGCGGTGAGCACACCGGAAATCATCTCGCAGTGCTT CGACGAGGGTGCCTCCGGCTACCTGTTCCGCGCGGGGCTGGGCACGACGGCGGTGGCGTCCGCCATCAACTCCCTGGTCC GAGGCGAGCGGCTGTTTCCGGTGCAGCTCCTGAGGAACGACTTCGAACATCCACCGGTGACGTCACCCACCGCGAGCGTG CTGCTGGCGCTCACGCAGCGCGAGCGCGAGGTGCTGGCGTATGTCGCGGGCGGCGCGGACAACCTGAAGATTGCCGCGCA CCTGCAAATCGCCGAGCGCACCGTGAAGTCCCACGTCACGCAACTCTACCGGAAGCTGGGCGCGGAGAACCGCACGCAGC TGGCGCTGAGGGCGTGCCACCTGGGCGTCCGGCCGCCGCCGGACCTCTAG
Upstream 100 bases:
>100_bases TTCCCTGTCATGCAACCCACTGGCCCAGGTGGTACCGGAGCCGGCTGTGGTCAGTTGTCTGTTCATGCAGTTTTCGCCAT GACGGCTGGGGGGCCTTCGC
Downstream 100 bases:
>100_bases GCGTCGCTGTCGTTCCGCTCATGCAGCACGCCCCCCGGACCCTGGCGCCGTTGCCAGGGGTCGCGAGGGGCGTGCGCACG GACGGTGCCGTGACTACGAC
Product: fruA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MATNQAAIRVSILEGPWAAWQGLADGLRGEGVQVSSVTRDVRLFLDSLGTDPPQVAVMDVEGDSEAAVGCSVTEGINLLR EARKRRLEVRMLLLSAVSTPEIISQCFDEGASGYLFRAGLGTTAVASAINSLVRGERLFPVQLLRNDFEHPPVTSPTASV LLALTQREREVLAYVAGGADNLKIAAHLQIAERTVKSHVTQLYRKLGAENRTQLALRACHLGVRPPPDL
Sequences:
>Translated_229_residues MATNQAAIRVSILEGPWAAWQGLADGLRGEGVQVSSVTRDVRLFLDSLGTDPPQVAVMDVEGDSEAAVGCSVTEGINLLR EARKRRLEVRMLLLSAVSTPEIISQCFDEGASGYLFRAGLGTTAVASAINSLVRGERLFPVQLLRNDFEHPPVTSPTASV LLALTQREREVLAYVAGGADNLKIAAHLQIAERTVKSHVTQLYRKLGAENRTQLALRACHLGVRPPPDL >Mature_228_residues ATNQAAIRVSILEGPWAAWQGLADGLRGEGVQVSSVTRDVRLFLDSLGTDPPQVAVMDVEGDSEAAVGCSVTEGINLLRE ARKRRLEVRMLLLSAVSTPEIISQCFDEGASGYLFRAGLGTTAVASAINSLVRGERLFPVQLLRNDFEHPPVTSPTASVL LALTQREREVLAYVAGGADNLKIAAHLQIAERTVKSHVTQLYRKLGAENRTQLALRACHLGVRPPPDL
Specific function: Member of the two-component regulatory system yfiJ/yfiK [H]
COG id: COG2197
COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786747, Length=187, Percent_Identity=24.5989304812834, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 - InterPro: IPR000792 - InterPro: IPR011991 [H]
Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 24674; Mature: 24542
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNQAAIRVSILEGPWAAWQGLADGLRGEGVQVSSVTRDVRLFLDSLGTDPPQVAVMDV CCCCCEEEEEEEECCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEE EGDSEAAVGCSVTEGINLLREARKRRLEVRMLLLSAVSTPEIISQCFDEGASGYLFRAGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCC GTTAVASAINSLVRGERLFPVQLLRNDFEHPPVTSPTASVLLALTQREREVLAYVAGGAD CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCC NLKIAAHLQIAERTVKSHVTQLYRKLGAENRTQLALRACHLGVRPPPDL CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ATNQAAIRVSILEGPWAAWQGLADGLRGEGVQVSSVTRDVRLFLDSLGTDPPQVAVMDV CCCCEEEEEEEECCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEEE EGDSEAAVGCSVTEGINLLREARKRRLEVRMLLLSAVSTPEIISQCFDEGASGYLFRAGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCC GTTAVASAINSLVRGERLFPVQLLRNDFEHPPVTSPTASVLLALTQREREVLAYVAGGAD CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCC NLKIAAHLQIAERTVKSHVTQLYRKLGAENRTQLALRACHLGVRPPPDL CEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8973323; 9384377 [H]