| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yajO [H]
Identifier: 108763491
GI number: 108763491
Start: 4905996
End: 4906976
Strand: Direct
Name: yajO [H]
Synonym: MXAN_4003
Alternate gene names: 108763491
Gene position: 4905996-4906976 (Clockwise)
Preceding gene: 108762638
Following gene: 108762884
Centisome position: 53.68
GC content: 68.09
Gene sequence:
>981_bases ATGAAATACACCAACCTCGGACGCACGGGTCTTCGTGTGTCTCGTCTCGGCCTGGGCTGCATGAGCTACGGCACGCCCAA GTGGCGCCCCTGGGTGCTGGATGAAGAAGCCGCGCAGCCGTTCTTCCGCCGGGCGGTGGAGCTGGGCATCAACTTCTTCG ACACCGCGGACATGTATTCACTGGGCGCGAGCGAGGAAATCACGGGCCGTGCCCTTCGCCGTTACGCGCGCATGGACGAG GTGGTGCTGGCCACCAAGGTCTACTTCCCCATGGGGGACGGGCAGAACATGCGGGGCCTGTCGCGCAAGCACATCGTCCA GGGCTGCGAGGCCAGCTTGAAGCGGCTGGGCGTGGAGGCCATCGACCTCTACCAGATTCACCGGATGGACCCGAACACGC CGCTGGAGGAGACGCTGGCCGCCCTGGACCAGCTCGTGCGCCAGGGCAAGGTGCGCTACCTGGGCGCGTCCTCCGCGTAT GCGTGGCAGTTCGCGCGGGCGCTGGGAGTCGCGGACCTGCGCGGCTGGACGCGCTTCGTGTCCATGCAGGGCCACTACAA CCTCGTCTATCGCGAGGAGGAGCGGGAGATGCTGCCCCTGTGCGAAGCCGAGGGCATTGGCGTCATCCCCTGGTCGCCGC TGGCTCGCGGCCTGCTCGCGGGCTCTCGCAAGTCGCTGAAGGACCGGGACGCCACCACGCGGGCGAAGTCGGACACGCTG TCACCCATGCTCTATGACCAGGCCAGTGACTGGGACGTGGCGGAAGCGAACCGGAGCGTCGCGGAGAAGCGCAACGTGCC TCCCGCGCAGACGGCCCTGGCCTGGCTCCTCTCGCGCCCCGCGGTGACGGCGCCCATCATCGGCGCCACGAAGCTGGAGC ACCTGGAGGATGCGGTGCGCGCGGTGGACCTCAAGCTGACCGCCGACGAAGTGAAGGCCTTGGAGGCCCCCTACCAGCCT CACGCCGTGCGTGGACTCTGA
Upstream 100 bases:
>100_bases TACGCGCGCGCCCCGGTCTTCCACGGTATGAGCCATGACACGCCCAGTGACACAACGAGGCGCGCCGCCATCCACGCTGA ATGAATGAGGAACCAACGGA
Downstream 100 bases:
>100_bases GCGCACGGCCGCGTCGACGGGACGCTGACACAGGCGAACCTGTCACGGCGCAAGCCTCCTGCGCTCCGGCGAGATGCACC CGGGCCCGCGGCGTCATGGA
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKYTNLGRTGLRVSRLGLGCMSYGTPKWRPWVLDEEAAQPFFRRAVELGINFFDTADMYSLGASEEITGRALRRYARMDE VVLATKVYFPMGDGQNMRGLSRKHIVQGCEASLKRLGVEAIDLYQIHRMDPNTPLEETLAALDQLVRQGKVRYLGASSAY AWQFARALGVADLRGWTRFVSMQGHYNLVYREEEREMLPLCEAEGIGVIPWSPLARGLLAGSRKSLKDRDATTRAKSDTL SPMLYDQASDWDVAEANRSVAEKRNVPPAQTALAWLLSRPAVTAPIIGATKLEHLEDAVRAVDLKLTADEVKALEAPYQP HAVRGL
Sequences:
>Translated_326_residues MKYTNLGRTGLRVSRLGLGCMSYGTPKWRPWVLDEEAAQPFFRRAVELGINFFDTADMYSLGASEEITGRALRRYARMDE VVLATKVYFPMGDGQNMRGLSRKHIVQGCEASLKRLGVEAIDLYQIHRMDPNTPLEETLAALDQLVRQGKVRYLGASSAY AWQFARALGVADLRGWTRFVSMQGHYNLVYREEEREMLPLCEAEGIGVIPWSPLARGLLAGSRKSLKDRDATTRAKSDTL SPMLYDQASDWDVAEANRSVAEKRNVPPAQTALAWLLSRPAVTAPIIGATKLEHLEDAVRAVDLKLTADEVKALEAPYQP HAVRGL >Mature_326_residues MKYTNLGRTGLRVSRLGLGCMSYGTPKWRPWVLDEEAAQPFFRRAVELGINFFDTADMYSLGASEEITGRALRRYARMDE VVLATKVYFPMGDGQNMRGLSRKHIVQGCEASLKRLGVEAIDLYQIHRMDPNTPLEETLAALDQLVRQGKVRYLGASSAY AWQFARALGVADLRGWTRFVSMQGHYNLVYREEEREMLPLCEAEGIGVIPWSPLARGLLAGSRKSLKDRDATTRAKSDTL SPMLYDQASDWDVAEANRSVAEKRNVPPAQTALAWLLSRPAVTAPIIGATKLEHLEDAVRAVDLKLTADEVKALEAPYQP HAVRGL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=330, Percent_Identity=33.030303030303, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI4504825, Length=328, Percent_Identity=32.9268292682927, Blast_Score=158, Evalue=8e-39, Organism=Homo sapiens, GI27436964, Length=330, Percent_Identity=32.7272727272727, Blast_Score=156, Evalue=2e-38, Organism=Homo sapiens, GI27436962, Length=330, Percent_Identity=32.4242424242424, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI27436966, Length=330, Percent_Identity=32.1212121212121, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI27436971, Length=335, Percent_Identity=31.6417910447761, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI41327764, Length=186, Percent_Identity=36.0215053763441, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI223718702, Length=199, Percent_Identity=34.1708542713568, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI41152114, Length=193, Percent_Identity=34.7150259067358, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI223718708, Length=145, Percent_Identity=34.4827586206897, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI87081735, Length=330, Percent_Identity=51.8181818181818, Blast_Score=330, Evalue=9e-92, Organism=Escherichia coli, GI1789375, Length=327, Percent_Identity=33.9449541284404, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789199, Length=357, Percent_Identity=29.1316526610644, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=31.9875776397516, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1788081, Length=293, Percent_Identity=28.6689419795222, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787674, Length=310, Percent_Identity=26.4516129032258, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI48994888, Length=288, Percent_Identity=26.3888888888889, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=347, Percent_Identity=40.0576368876081, Blast_Score=246, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6323998, Length=330, Percent_Identity=29.6969696969697, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6319958, Length=292, Percent_Identity=28.7671232876712, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6322615, Length=249, Percent_Identity=30.1204819277108, Blast_Score=110, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6319951, Length=315, Percent_Identity=27.6190476190476, Blast_Score=107, Evalue=3e-24, Organism=Drosophila melanogaster, GI24640980, Length=348, Percent_Identity=29.0229885057471, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI45549126, Length=348, Percent_Identity=29.0229885057471, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI24646155, Length=325, Percent_Identity=30.4615384615385, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24646159, Length=321, Percent_Identity=26.791277258567, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 36382; Mature: 36382
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYTNLGRTGLRVSRLGLGCMSYGTPKWRPWVLDEEAAQPFFRRAVELGINFFDTADMYS CCCCCCCCCCCCHHHHCCHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHH LGASEEITGRALRRYARMDEVVLATKVYFPMGDGQNMRGLSRKHIVQGCEASLKRLGVEA CCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHH IDLYQIHRMDPNTPLEETLAALDQLVRQGKVRYLGASSAYAWQFARALGVADLRGWTRFV HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHE SMQGHYNLVYREEEREMLPLCEAEGIGVIPWSPLARGLLAGSRKSLKDRDATTRAKSDTL ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHCCCCC SPMLYDQASDWDVAEANRSVAEKRNVPPAQTALAWLLSRPAVTAPIIGATKLEHLEDAVR CCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AVDLKLTADEVKALEAPYQPHAVRGL HHHEEEEHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKYTNLGRTGLRVSRLGLGCMSYGTPKWRPWVLDEEAAQPFFRRAVELGINFFDTADMYS CCCCCCCCCCCCHHHHCCHHHHCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCHHHH LGASEEITGRALRRYARMDEVVLATKVYFPMGDGQNMRGLSRKHIVQGCEASLKRLGVEA CCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHH IDLYQIHRMDPNTPLEETLAALDQLVRQGKVRYLGASSAYAWQFARALGVADLRGWTRFV HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHE SMQGHYNLVYREEEREMLPLCEAEGIGVIPWSPLARGLLAGSRKSLKDRDATTRAKSDTL ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCHHHHHCCCCC SPMLYDQASDWDVAEANRSVAEKRNVPPAQTALAWLLSRPAVTAPIIGATKLEHLEDAVR CCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AVDLKLTADEVKALEAPYQPHAVRGL HHHEEEEHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]