BacMap

Definition	Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession	NC_008095
Length	9,139,763

Click here to switch to the map view.

The map label for this gene is fabG1 [H]

Identifier: 108763461

GI number: 108763461

Start: 5376058

End: 5376834

Strand: Reverse

Name: fabG1 [H]

Synonym: MXAN_4370

Alternate gene names: 108763461

Gene position: 5376834-5376058 (Counterclockwise)

Preceding gene: 108757275

Following gene: 108762942

Centisome position: 58.83

GC content: 69.63

Gene sequence:

>777_bases
ATGGACACGGAGCTGCAGGGCAGAGGCGTCCTGGTCACGGGCGGCGCCGGAGGAATCGGCACCGCCCTGGTCCATACCTT
CGCGGAAGAAGGCGCGAAGGTGGCAGTGCACCACCACTCCAGTACCGAGAAGGCCCAGGCGCTGGCACGCGACGTCGGCG
GTGCAGCGCTGCGCGCGGACCTGACGGTGGAGGCCGACGTGGACGCGCTGGTTCCCGCGGCGGTGGCCGCGCTGGGGCGG
CTGGACGTGCTGGTCTGCAACGCGGGTGTCTGGCCCGCCCCGGATGAACCCGTCTGGGAGATGTCCCTGGCGCGCTGGCG
CCGCACGCTGGCGGAGAACCTGGACAGCGTCTTCCTGTGCTGCCGTGCCTTCCTGCGGCACGTGGCCACCACGAAGACGG
GCAACATCGTCATCATCAGCTCCACGGCGGGGCTGTTCGGTGAAGCAGGACACGCTGACTACGCCGCCGCCAAGGGCGCG
CTGGCGAGTGGCTTCCTCAAGAGCCTCAAGAACGAATTGGGCCGCATCGCGCCCCTGGGCCGCGTCAACGTCGTGTGCCC
GGGATGGACGGCGGTGGACCGCAGCCGCGACAAGCTGGCCCAGCCGGGCTTCGTTGAACGCGTCACGCGGACGATGCCGC
TGCGCAAGGTGGCGCAGCCGGTGGATGTGGCGCGGGCGGTGGTGTCGCTCGCGTCGGACCGAATCTCCGGACATGTGACG
GGTGAAGTCGTCACTGTCGCCGGAGGCATGGAAGGAAGGGTGCTGCATGACGACTGA

Upstream 100 bases:

>100_bases
TGGGGCCTCGTCTCGTCATGAGCCGCCGGACGCCACCGGTGTGCCCGGGACTCCGCCGCGAAGCGGTCCCGTGAAAGCAC
GACCCGAGGAGAACACCCGG

Downstream 100 bases:

>100_bases
ATTGGATGTGCGGACGTACAACCGCGAGGCGTGGGACCGTCAGGTGGCCACGGGCAACAGGTGGACGCTTCCCGTCAGCC
CAGAAGTCATCGCCGCGGCA

Product: NAD dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase 1 [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MDTELQGRGVLVTGGAGGIGTALVHTFAEEGAKVAVHHHSSTEKAQALARDVGGAALRADLTVEADVDALVPAAVAALGR
LDVLVCNAGVWPAPDEPVWEMSLARWRRTLAENLDSVFLCCRAFLRHVATTKTGNIVIISSTAGLFGEAGHADYAAAKGA
LASGFLKSLKNELGRIAPLGRVNVVCPGWTAVDRSRDKLAQPGFVERVTRTMPLRKVAQPVDVARAVVSLASDRISGHVT
GEVVTVAGGMEGRVLHDD

Sequences:

>Translated_258_residues
MDTELQGRGVLVTGGAGGIGTALVHTFAEEGAKVAVHHHSSTEKAQALARDVGGAALRADLTVEADVDALVPAAVAALGR
LDVLVCNAGVWPAPDEPVWEMSLARWRRTLAENLDSVFLCCRAFLRHVATTKTGNIVIISSTAGLFGEAGHADYAAAKGA
LASGFLKSLKNELGRIAPLGRVNVVCPGWTAVDRSRDKLAQPGFVERVTRTMPLRKVAQPVDVARAVVSLASDRISGHVT
GEVVTVAGGMEGRVLHDD
>Mature_258_residues
MDTELQGRGVLVTGGAGGIGTALVHTFAEEGAKVAVHHHSSTEKAQALARDVGGAALRADLTVEADVDALVPAAVAALGR
LDVLVCNAGVWPAPDEPVWEMSLARWRRTLAENLDSVFLCCRAFLRHVATTKTGNIVIISSTAGLFGEAGHADYAAAKGA
LASGFLKSLKNELGRIAPLGRVNVVCPGWTAVDRSRDKLAQPGFVERVTRTMPLRKVAQPVDVARAVVSLASDRISGHVT
GEVVTVAGGMEGRVLHDD

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=33.8842975206612, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI15277342, Length=268, Percent_Identity=33.2089552238806, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI32483357, Length=256, Percent_Identity=32.03125, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI59889578, Length=234, Percent_Identity=32.0512820512821, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI4504505, Length=199, Percent_Identity=34.1708542713568, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=28.957528957529, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI7705925, Length=254, Percent_Identity=31.1023622047244, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=28.1124497991968, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=35.3174603174603, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=36.4, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=32.1705426356589, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1790717, Length=251, Percent_Identity=27.8884462151394, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789378, Length=260, Percent_Identity=31.5384615384615, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=31.7829457364341, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787905, Length=253, Percent_Identity=29.6442687747036, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=28.2258064516129, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=30.9236947791165, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=28.3464566929134, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=32.1138211382114, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789057, Length=260, Percent_Identity=28.4615384615385, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788891, Length=272, Percent_Identity=28.6764705882353, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=269, Percent_Identity=29.368029739777, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI25147288, Length=258, Percent_Identity=30.6201550387597, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17555706, Length=258, Percent_Identity=32.1705426356589, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=29.7619047619048, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=273, Percent_Identity=27.8388278388278, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=27.5590551181102, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=273, Percent_Identity=27.8388278388278, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=28.7878787878788, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=30.6818181818182, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI193204405, Length=277, Percent_Identity=29.2418772563177, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=30.6772908366534, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=30.6201550387597, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=196, Percent_Identity=29.0816326530612, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193203117, Length=196, Percent_Identity=29.0816326530612, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=27.3764258555133, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=275, Percent_Identity=26.1818181818182, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=29.7979797979798, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=28.8389513108614, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=259, Percent_Identity=28.1853281853282, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=263, Percent_Identity=27.3764258555133, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=285, Percent_Identity=25.9649122807018, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=258, Percent_Identity=28.2945736434109, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=28.030303030303, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=265, Percent_Identity=24.9056603773585, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=196, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17508895, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=29.5019157088123, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6322861, Length=195, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=8e-15,
Organism=Saccharomyces cerevisiae, GI6322227, Length=261, Percent_Identity=27.2030651340996, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=257, Percent_Identity=28.0155642023346, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=32.8063241106719, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=28.8537549407115, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI28571526, Length=259, Percent_Identity=33.5907335907336, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21355319, Length=261, Percent_Identity=27.5862068965517, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=32, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI18859837, Length=166, Percent_Identity=33.1325301204819, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281364892, Length=196, Percent_Identity=30.1020408163265, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24643142, Length=254, Percent_Identity=32.2834645669291, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=30.1960784313725, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26953; Mature: 26953

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTELQGRGVLVTGGAGGIGTALVHTFAEEGAKVAVHHHSSTEKAQALARDVGGAALRAD
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEC
LTVEADVDALVPAAVAALGRLDVLVCNAGVWPAPDEPVWEMSLARWRRTLAENLDSVFLC
EEEECCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CRAFLRHVATTKTGNIVIISSTAGLFGEAGHADYAAAKGALASGFLKSLKNELGRIAPLG
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RVNVVCPGWTAVDRSRDKLAQPGFVERVTRTMPLRKVAQPVDVARAVVSLASDRISGHVT
CEEEEECCCHHHHCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEC
GEVVTVAGGMEGRVLHDD
CEEEEEECCCCCCEECCC
>Mature Secondary Structure
MDTELQGRGVLVTGGAGGIGTALVHTFAEEGAKVAVHHHSSTEKAQALARDVGGAALRAD
CCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEC
LTVEADVDALVPAAVAALGRLDVLVCNAGVWPAPDEPVWEMSLARWRRTLAENLDSVFLC
EEEECCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CRAFLRHVATTKTGNIVIISSTAGLFGEAGHADYAAAKGALASGFLKSLKNELGRIAPLG
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RVNVVCPGWTAVDRSRDKLAQPGFVERVTRTMPLRKVAQPVDVARAVVSLASDRISGHVT
CEEEEECCCHHHHCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEC
GEVVTVAGGMEGRVLHDD
CEEEEEECCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]