| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763438
Identifier: 108763438
GI number: 108763438
Start: 5317046
End: 5317471
Strand: Reverse
Name: 108763438
Synonym: MXAN_4318
Alternate gene names: NA
Gene position: 5317471-5317046 (Counterclockwise)
Preceding gene: 108760329
Following gene: 108762502
Centisome position: 58.18
GC content: 72.54
Gene sequence:
>426_bases ATGACTTCCTCCATCCTCCTTCCTCTCCTGGGCGGGGCCCTCATCGGGCTGAGCGCCTCCCTGTTGCTCCTGGCCAACGG CCGGGTCGCCGGCATCAGCGGCGTGGTGGGCTCGCTGCTGGCCCCCGTGCGCGGTGACGTCGCCTGGCGCGTGCTCTTCT TCGCCGGGCTGCTCGCCGGAGGGCTGCTGCTCGCCTGGTTGCGCCCCGGTTCCTTCCCGGCGCCCTCGACTCCTGGCGCG GGCGGCCTCTGGCTGCTGGTGGGGGCCGGACTGCTGGTGGGGTTCGGCTCGCGGCTGGGCAACGGCTGCACCAGCGGACA CGGCGTCTGCGGCATCAGCCGGGGCTCGGTCCGCTCCATCTCCGCCACGCTCACCTTCATGGCCACCGGTGTCCTCACCG TCTTCCTGGTCCGCCACGTCCTCTAG
Upstream 100 bases:
>100_bases GTCCATGAGAGGCCGGGGCGTGGAAGAAGGATTCAGGCCCTGCTGAATCCATTCTCAGGCCCTGCTGAATCCTTTCTTTG GAGCCTGGCTCTCACGCGAC
Downstream 100 bases:
>100_bases AGAAAGCCCCCATGCGTTCCTCCCTCAGTGCGTTCCTCAGCGGCCTCATCTTCGCCATTGGCTTGGGCCTCGCAGGCATG ACGGACCCGGCCAACGTCCT
Product: YeeE/YedE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTSSILLPLLGGALIGLSASLLLLANGRVAGISGVVGSLLAPVRGDVAWRVLFFAGLLAGGLLLAWLRPGSFPAPSTPGA GGLWLLVGAGLLVGFGSRLGNGCTSGHGVCGISRGSVRSISATLTFMATGVLTVFLVRHVL
Sequences:
>Translated_141_residues MTSSILLPLLGGALIGLSASLLLLANGRVAGISGVVGSLLAPVRGDVAWRVLFFAGLLAGGLLLAWLRPGSFPAPSTPGA GGLWLLVGAGLLVGFGSRLGNGCTSGHGVCGISRGSVRSISATLTFMATGVLTVFLVRHVL >Mature_140_residues TSSILLPLLGGALIGLSASLLLLANGRVAGISGVVGSLLAPVRGDVAWRVLFFAGLLAGGLLLAWLRPGSFPAPSTPGAG GLWLLVGAGLLVGFGSRLGNGCTSGHGVCGISRGSVRSISATLTFMATGVLTVFLVRHVL
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 14019; Mature: 13888
Theoretical pI: Translated: 12.50; Mature: 12.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSILLPLLGGALIGLSASLLLLANGRVAGISGVVGSLLAPVRGDVAWRVLFFAGLLAG CCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GLLLAWLRPGSFPAPSTPGAGGLWLLVGAGLLVGFGSRLGNGCTSGHGVCGISRGSVRSI HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH SATLTFMATGVLTVFLVRHVL HHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TSSILLPLLGGALIGLSASLLLLANGRVAGISGVVGSLLAPVRGDVAWRVLFFAGLLAG CCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GLLLAWLRPGSFPAPSTPGAGGLWLLVGAGLLVGFGSRLGNGCTSGHGVCGISRGSVRSI HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHH SATLTFMATGVLTVFLVRHVL HHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]