| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is expZ [H]
Identifier: 108763409
GI number: 108763409
Start: 4854343
End: 4855845
Strand: Direct
Name: expZ [H]
Synonym: MXAN_3986
Alternate gene names: 108763409
Gene position: 4854343-4855845 (Clockwise)
Preceding gene: 108760823
Following gene: 108762591
Centisome position: 53.11
GC content: 71.72
Gene sequence:
>1503_bases ATGTCTTCCGTGCGCGCGCACCGCGTTTCGTTCGCCTTTTCCGACGCCGTTCCTGTCCTCTCTGAAGTCGACTTCCACCT GTCCCCTGGCTGGACGGGGCTCGTGGGTGCCAATGGCGCCGGCAAGTCCACCCTGCTCCGGCTGTTGGCGGGAGAGCTGA CGCCCACCGAGGGACACCTTCAGTTCGAGCCCTCCACCCCCACCCTCCGCCTCTGCCGGCAGGAGGTGGAGGCGCTGACG CCCGACATCTCCGCCTTCGCGGAGTCGTGGGACTCCGTCGCGCGGCGACTGCACGGCCAACTGGGCCTGGACGTCACCGC GCTGGAGCGCTGGCCCACGCTGTCCCCGGGCGAGCGCAAGCGGTGGCAGGTGGGCGCCGCCCTGGCCGCGGAGCCCCATT TGCTGCTCTTGGATGAGCCCACCAACCACCTGGATGCGGAGGCCCGCACATGGCTCATCTCCGCGCTGCGCCGCTTCCGG GGCCTGGGCATCGTGGTGTCACACGACCGCGACCTGCTGGAGTCCCTCACCACCTCCACGCTGCGCGTCCACCACGGCAG CGCGCGGCTGTGGCCCGGCGCATACACCGCCGCGCGGGCGCACTGGGAAGCCGAGCGTGAGGCTGAAATCGCCACCCACC AGCAAGCCCGCGCCGAACAACGCCGTGCGGCGCATCTGCTGGACCAGGCCCGGCGCGAACAACAGTCCGCGGATGCCGCG CGGCACACCCGCAAGCGACTGAAGAACAAACACGACAACGACGCCCGCTCCATGGGCGCCAAGGTCGTTGCCGGCTGGGC GGAGGCTGGGGCCGGACGGCGCGTGGGCATCGCACGGCGCGAGTTGGAGCGCGTCAGTGAGGCCGTGGGCGAGTTCACCG CGGACAAGACGGTGGGCCGCTCCGTCTTCCTGGACTACGTGCGCGCGCCGAACCCGTGGCTCTTCACGCTGGACGTGCCC GGCCTCCGCGCCGGTGACGTGGAGCTGCTGGGCCCCGTGAATCTCTCCGTGAGCCGTGAGGCCCGCGTGCGCGTCGAAGG GCCCAACGGCGCCGGCAAGAGCACCCTGGTGCGCGCACTGCTGGAGAACGCGCGCATTCCGCTGGAGCGCGTGCTCTACC TGCCCCAGGACGTCAGCGCGGACGAGGCCCGGGCCACGCTGGACGCGGTGCGCGCACTGCCGCCCGAGGAACGCGGACGC GTGCTGTCACTCGTCGCGGCGCTCGGCGTGGACCCGGAGCGGCTGCTCGCCTCCGAGCAGCCCTCCCCCGGCGAGGTGCG CAAGCTCCTCATCGCCCGGGGACTGGGGCAACACGCCTGGGCCCTGGTGCTGGACGAGCCCACCAACCACCTGGACCTGC CGTCCATCGAACGGCTGGAGGCGGCGCTGCGGGAGTACCCCGGCGCGCTGATGCTCGTCACGCATGACACGTCCTTCGCC CAGGCCTGCACCTCCGAGGTGTGGCGCGTGGAGCATGGCCAGGTGACGGTGACGTCCGGGTAG
Upstream 100 bases:
>100_bases GCACCCTTGAGGACGCTTCGCTGAATTCCCAGGTCCGTTGATGTTCCCGCGCTGAGCCGCCTTCGGGCTGGCTTGCGCCC TGGATTCAGGAGTTTCCTCT
Downstream 100 bases:
>100_bases CCGGCACGGAGGCCCCACCTCGAGGCACGTTGAAGACGCCCAGCCACGTCTCGTCGTTCTGCCTCAGGTGCCCGACTGTT CGTGGAACCACGCCACCAGT
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MSSVRAHRVSFAFSDAVPVLSEVDFHLSPGWTGLVGANGAGKSTLLRLLAGELTPTEGHLQFEPSTPTLRLCRQEVEALT PDISAFAESWDSVARRLHGQLGLDVTALERWPTLSPGERKRWQVGAALAAEPHLLLLDEPTNHLDAEARTWLISALRRFR GLGIVVSHDRDLLESLTTSTLRVHHGSARLWPGAYTAARAHWEAEREAEIATHQQARAEQRRAAHLLDQARREQQSADAA RHTRKRLKNKHDNDARSMGAKVVAGWAEAGAGRRVGIARRELERVSEAVGEFTADKTVGRSVFLDYVRAPNPWLFTLDVP GLRAGDVELLGPVNLSVSREARVRVEGPNGAGKSTLVRALLENARIPLERVLYLPQDVSADEARATLDAVRALPPEERGR VLSLVAALGVDPERLLASEQPSPGEVRKLLIARGLGQHAWALVLDEPTNHLDLPSIERLEAALREYPGALMLVTHDTSFA QACTSEVWRVEHGQVTVTSG
Sequences:
>Translated_500_residues MSSVRAHRVSFAFSDAVPVLSEVDFHLSPGWTGLVGANGAGKSTLLRLLAGELTPTEGHLQFEPSTPTLRLCRQEVEALT PDISAFAESWDSVARRLHGQLGLDVTALERWPTLSPGERKRWQVGAALAAEPHLLLLDEPTNHLDAEARTWLISALRRFR GLGIVVSHDRDLLESLTTSTLRVHHGSARLWPGAYTAARAHWEAEREAEIATHQQARAEQRRAAHLLDQARREQQSADAA RHTRKRLKNKHDNDARSMGAKVVAGWAEAGAGRRVGIARRELERVSEAVGEFTADKTVGRSVFLDYVRAPNPWLFTLDVP GLRAGDVELLGPVNLSVSREARVRVEGPNGAGKSTLVRALLENARIPLERVLYLPQDVSADEARATLDAVRALPPEERGR VLSLVAALGVDPERLLASEQPSPGEVRKLLIARGLGQHAWALVLDEPTNHLDLPSIERLEAALREYPGALMLVTHDTSFA QACTSEVWRVEHGQVTVTSG >Mature_499_residues SSVRAHRVSFAFSDAVPVLSEVDFHLSPGWTGLVGANGAGKSTLLRLLAGELTPTEGHLQFEPSTPTLRLCRQEVEALTP DISAFAESWDSVARRLHGQLGLDVTALERWPTLSPGERKRWQVGAALAAEPHLLLLDEPTNHLDAEARTWLISALRRFRG LGIVVSHDRDLLESLTTSTLRVHHGSARLWPGAYTAARAHWEAEREAEIATHQQARAEQRRAAHLLDQARREQQSADAAR HTRKRLKNKHDNDARSMGAKVVAGWAEAGAGRRVGIARRELERVSEAVGEFTADKTVGRSVFLDYVRAPNPWLFTLDVPG LRAGDVELLGPVNLSVSREARVRVEGPNGAGKSTLVRALLENARIPLERVLYLPQDVSADEARATLDAVRALPPEERGRV LSLVAALGVDPERLLASEQPSPGEVRKLLIARGLGQHAWALVLDEPTNHLDLPSIERLEAALREYPGALMLVTHDTSFAQ ACTSEVWRVEHGQVTVTSG
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI27881506, Length=556, Percent_Identity=25.7194244604317, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI10947137, Length=556, Percent_Identity=25.7194244604317, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI148612853, Length=563, Percent_Identity=28.0639431616341, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI10947135, Length=534, Percent_Identity=25.8426966292135, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI69354671, Length=534, Percent_Identity=25.8426966292135, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI1789751, Length=528, Percent_Identity=28.4090909090909, Blast_Score=145, Evalue=6e-36, Organism=Escherichia coli, GI1787041, Length=541, Percent_Identity=26.6173752310536, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI2367384, Length=571, Percent_Identity=26.9702276707531, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI1787182, Length=554, Percent_Identity=26.3537906137184, Blast_Score=135, Evalue=9e-33, Organism=Escherichia coli, GI87081834, Length=190, Percent_Identity=32.6315789473684, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1788897, Length=203, Percent_Identity=30.0492610837438, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787164, Length=180, Percent_Identity=36.1111111111111, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787758, Length=185, Percent_Identity=26.4864864864865, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=26.9230769230769, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17559834, Length=540, Percent_Identity=25.3703703703704, Blast_Score=124, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17553372, Length=546, Percent_Identity=26.007326007326, Blast_Score=97, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320874, Length=521, Percent_Identity=23.0326295585413, Blast_Score=114, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6321121, Length=425, Percent_Identity=27.5294117647059, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6323278, Length=104, Percent_Identity=38.4615384615385, Blast_Score=70, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6325030, Length=191, Percent_Identity=30.3664921465969, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642252, Length=522, Percent_Identity=26.2452107279693, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI18859989, Length=522, Percent_Identity=26.2452107279693, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI24666836, Length=547, Percent_Identity=26.691042047532, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24641342, Length=537, Percent_Identity=26.0707635009311, Blast_Score=115, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 54795; Mature: 54663
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVRAHRVSFAFSDAVPVLSEVDFHLSPGWTGLVGANGAGKSTLLRLLAGELTPTEGHL CCCCCHHHEEEEHHCCCHHHHHCCCEECCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCE QFEPSTPTLRLCRQEVEALTPDISAFAESWDSVARRLHGQLGLDVTALERWPTLSPGERK EECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCC RWQVGAALAAEPHLLLLDEPTNHLDAEARTWLISALRRFRGLGIVVSHDRDLLESLTTST CEECCHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH LRVHHGSARLWPGAYTAARAHWEAEREAEIATHQQARAEQRRAAHLLDQARREQQSADAA EEEECCCCEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHTRKRLKNKHDNDARSMGAKVVAGWAEAGAGRRVGIARRELERVSEAVGEFTADKTVGR HHHHHHHCCCCCCHHHHHCHHHEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SVFLDYVRAPNPWLFTLDVPGLRAGDVELLGPVNLSVSREARVRVEGPNGAGKSTLVRAL HHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCEECCCCEEEEECCCCCCHHHHHHHH LENARIPLERVLYLPQDVSADEARATLDAVRALPPEERGRVLSLVAALGVDPERLLASEQ HHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCC PSPGEVRKLLIARGLGQHAWALVLDEPTNHLDLPSIERLEAALREYPGALMLVTHDTSFA CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHH QACTSEVWRVEHGQVTVTSG HHHHHHHHEEECCEEEEECC >Mature Secondary Structure SSVRAHRVSFAFSDAVPVLSEVDFHLSPGWTGLVGANGAGKSTLLRLLAGELTPTEGHL CCCCHHHEEEEHHCCCHHHHHCCCEECCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCE QFEPSTPTLRLCRQEVEALTPDISAFAESWDSVARRLHGQLGLDVTALERWPTLSPGERK EECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCC RWQVGAALAAEPHLLLLDEPTNHLDAEARTWLISALRRFRGLGIVVSHDRDLLESLTTST CEECCHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH LRVHHGSARLWPGAYTAARAHWEAEREAEIATHQQARAEQRRAAHLLDQARREQQSADAA EEEECCCCEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHTRKRLKNKHDNDARSMGAKVVAGWAEAGAGRRVGIARRELERVSEAVGEFTADKTVGR HHHHHHHCCCCCCHHHHHCHHHEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SVFLDYVRAPNPWLFTLDVPGLRAGDVELLGPVNLSVSREARVRVEGPNGAGKSTLVRAL HHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCEECCCCEEEEECCCCCCHHHHHHHH LENARIPLERVLYLPQDVSADEARATLDAVRALPPEERGRVLSLVAALGVDPERLLASEQ HHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCC PSPGEVRKLLIARGLGQHAWALVLDEPTNHLDLPSIERLEAALREYPGALMLVTHDTSFA CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHH QACTSEVWRVEHGQVTVTSG HHHHHHHHEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]