| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hflX [H]
Identifier: 108763341
GI number: 108763341
Start: 6526399
End: 6527829
Strand: Reverse
Name: hflX [H]
Synonym: MXAN_5229
Alternate gene names: 108763341
Gene position: 6527829-6526399 (Counterclockwise)
Preceding gene: 108761233
Following gene: 108760202
Centisome position: 71.42
GC content: 69.11
Gene sequence:
>1431_bases ATGCGCATGGCGATTTCCACATTCCCTGAGCGTCTGCGTGCCGTCCTCGTCGGTGTCCAGCTTCCGGGCGTCTCGGACGA AGAGCACGCCGCGGACTTCGCGGAGCTGCGCCGGCTGGTGCACACGCTGGGGTATGACACGGTGGCGACCGTGTCCCAGA AGCGGACGCGGCTGGCCACGGGCACGGTGCTCGGGACGGGCAAGCTCAAGGAGCTGGCGGCCCTCACCGGAGGCTCGGGC GTGATTGCATCCGGAGCGAGCGACCGGACGTCCAAGGCCCGCGAGAAGTGGGAGGCCGCCGCCAACACGGAGCCCGACTC CGAGGACGAGGTTGTCGAAGAGGAGGCCGACGGCGTGGAGACGGAGGACGCGCTGCTGCCTCCGCCTTCGGAAGAAGACG ACAAGGCGGAGCCCCGGCCCACCGTGGTGGTCGTGGACCACGAGCTGTCTCCCGGCCAGCTGCGCAACCTGGAGAAGGCC ACCGGCGCGATGGTGCTGGATCGCGCGGGCGTGATTGTCGACATCTTCCACCGGCACGCGAAGAGCCATGAAGCGCGGAT GCAGGTGGAGATCGCCCGGCTCAACTACCTGGCCCCCCGGCTGCGCGAATCCACCGGAGGCCGCGAGCGGCAGCAGGGGC GTGGCGCGGGGGACTCGGCGCTGGAGCTGGACCGCCGCAAGATTCGCGACCGGCTGGCGGAGTTGCGCGAGGGCCTGGCG GCCATCCAGAAGGACCAGGACCACCGCCGCTACGCGCGAAGGGACCTGCTGCGGGTGGCATTGGTGGGCTACACGAACGC GGGCAAGTCCTCGCTGATGCGTGCGTTGACGGGCAGCACGGTGCTGGTCGCGGACCAGCTCTTCGCCACGCTCGACACCA CGGTGCGCGCGATGCAGCCGGAGACCCGTCCGCGCATCCTGGTCTCCGACACGGTGGGCTTCATCCAGAAGCTGCCGCAC GACCTGGTCGCGTCCTTCCGCTCCACGCTGGACGAGGCCCTGGAAGCGTCACTGCTGCTCTATGTGGTGGATGCGTCGGA CCCCACGTGGGCCGCGCAGTTGGAGGTCACCCGCACGGTGCTCCGGGATATCGGCGCGGACGCCGTCCCGAGCAAGCTTC TCTTCAACAAGGCGGACCGGCTGGACGCGGCGGCGAAGGAAGCGCTGCTCGCGAAGCACCCGGACGCCTTGCTGCTCTCC GCGCACCTGCCGGACGACGTGGCGATGCTGCGCAAGAACATCATCGCCTTCTTCGAGTCCTCGATGGTGGAGGCAGACCT GGTGATTCCCTACTCCCGGCAGGGGCGCATCAGCGAGGTGTACGAGCACACCACGGTGGTGTCCCAGGCCTACGACGAGA GCGGCAGCCGGCTGCGCGTGCGGGGCCTTCCAGGGGCCATCGCGAAGCTCACCCAGTCGTTCCAGGAATAG
Upstream 100 bases:
>100_bases CCTACCCCCCTCTCCATCCAGGCAAGGTGTCGCCCGGACCCCGAGGGGGGCGGGGGGCGTGGACTCGCCCCGTCGCGGGA CGGCCCGACGTGTTACGAGC
Downstream 100 bases:
>100_bases GCCTTCTCTGGGGCCACCCCAGCGAAGGTCGTCCACTCCGCCTGCCTCACGGGCCGGGAAACCGGAGGCCCCTGACGCCC GCGCTCCGGCACGGCACCGG
Product: putative GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MRMAISTFPERLRAVLVGVQLPGVSDEEHAADFAELRRLVHTLGYDTVATVSQKRTRLATGTVLGTGKLKELAALTGGSG VIASGASDRTSKAREKWEAAANTEPDSEDEVVEEEADGVETEDALLPPPSEEDDKAEPRPTVVVVDHELSPGQLRNLEKA TGAMVLDRAGVIVDIFHRHAKSHEARMQVEIARLNYLAPRLRESTGGRERQQGRGAGDSALELDRRKIRDRLAELREGLA AIQKDQDHRRYARRDLLRVALVGYTNAGKSSLMRALTGSTVLVADQLFATLDTTVRAMQPETRPRILVSDTVGFIQKLPH DLVASFRSTLDEALEASLLLYVVDASDPTWAAQLEVTRTVLRDIGADAVPSKLLFNKADRLDAAAKEALLAKHPDALLLS AHLPDDVAMLRKNIIAFFESSMVEADLVIPYSRQGRISEVYEHTTVVSQAYDESGSRLRVRGLPGAIAKLTQSFQE
Sequences:
>Translated_476_residues MRMAISTFPERLRAVLVGVQLPGVSDEEHAADFAELRRLVHTLGYDTVATVSQKRTRLATGTVLGTGKLKELAALTGGSG VIASGASDRTSKAREKWEAAANTEPDSEDEVVEEEADGVETEDALLPPPSEEDDKAEPRPTVVVVDHELSPGQLRNLEKA TGAMVLDRAGVIVDIFHRHAKSHEARMQVEIARLNYLAPRLRESTGGRERQQGRGAGDSALELDRRKIRDRLAELREGLA AIQKDQDHRRYARRDLLRVALVGYTNAGKSSLMRALTGSTVLVADQLFATLDTTVRAMQPETRPRILVSDTVGFIQKLPH DLVASFRSTLDEALEASLLLYVVDASDPTWAAQLEVTRTVLRDIGADAVPSKLLFNKADRLDAAAKEALLAKHPDALLLS AHLPDDVAMLRKNIIAFFESSMVEADLVIPYSRQGRISEVYEHTTVVSQAYDESGSRLRVRGLPGAIAKLTQSFQE >Mature_476_residues MRMAISTFPERLRAVLVGVQLPGVSDEEHAADFAELRRLVHTLGYDTVATVSQKRTRLATGTVLGTGKLKELAALTGGSG VIASGASDRTSKAREKWEAAANTEPDSEDEVVEEEADGVETEDALLPPPSEEDDKAEPRPTVVVVDHELSPGQLRNLEKA TGAMVLDRAGVIVDIFHRHAKSHEARMQVEIARLNYLAPRLRESTGGRERQQGRGAGDSALELDRRKIRDRLAELREGLA AIQKDQDHRRYARRDLLRVALVGYTNAGKSSLMRALTGSTVLVADQLFATLDTTVRAMQPETRPRILVSDTVGFIQKLPH DLVASFRSTLDEALEASLLLYVVDASDPTWAAQLEVTRTVLRDIGADAVPSKLLFNKADRLDAAAKEALLAKHPDALLLS AHLPDDVAMLRKNIIAFFESSMVEADLVIPYSRQGRISEVYEHTTVVSQAYDESGSRLRVRGLPGAIAKLTQSFQE
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133118, Length=174, Percent_Identity=36.7816091954023, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI310124269, Length=174, Percent_Identity=36.7816091954023, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI310124267, Length=174, Percent_Identity=36.7816091954023, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI310124171, Length=174, Percent_Identity=36.7816091954023, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI310124169, Length=174, Percent_Identity=36.7816091954023, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI310133116, Length=174, Percent_Identity=36.7816091954023, Blast_Score=106, Evalue=5e-23, Organism=Escherichia coli, GI1790615, Length=336, Percent_Identity=38.9880952380952, Blast_Score=211, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17561038, Length=244, Percent_Identity=33.6065573770492, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24650079, Length=257, Percent_Identity=34.6303501945525, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 52114; Mature: 52114
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMAISTFPERLRAVLVGVQLPGVSDEEHAADFAELRRLVHTLGYDTVATVSQKRTRLAT CCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GTVLGTGKLKELAALTGGSGVIASGASDRTSKAREKWEAAANTEPDSEDEVVEEEADGVE CEEECCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC TEDALLPPPSEEDDKAEPRPTVVVVDHELSPGQLRNLEKATGAMVLDRAGVIVDIFHRHA CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KSHEARMQVEIARLNYLAPRLRESTGGRERQQGRGAGDSALELDRRKIRDRLAELREGLA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH AIQKDQDHRRYARRDLLRVALVGYTNAGKSSLMRALTGSTVLVADQLFATLDTTVRAMQP HHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCC ETRPRILVSDTVGFIQKLPHDLVASFRSTLDEALEASLLLYVVDASDPTWAAQLEVTRTV CCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHH LRDIGADAVPSKLLFNKADRLDAAAKEALLAKHPDALLLSAHLPDDVAMLRKNIIAFFES HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH SMVEADLVIPYSRQGRISEVYEHTTVVSQAYDESGSRLRVRGLPGAIAKLTQSFQE HHCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MRMAISTFPERLRAVLVGVQLPGVSDEEHAADFAELRRLVHTLGYDTVATVSQKRTRLAT CCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GTVLGTGKLKELAALTGGSGVIASGASDRTSKAREKWEAAANTEPDSEDEVVEEEADGVE CEEECCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC TEDALLPPPSEEDDKAEPRPTVVVVDHELSPGQLRNLEKATGAMVLDRAGVIVDIFHRHA CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KSHEARMQVEIARLNYLAPRLRESTGGRERQQGRGAGDSALELDRRKIRDRLAELREGLA CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH AIQKDQDHRRYARRDLLRVALVGYTNAGKSSLMRALTGSTVLVADQLFATLDTTVRAMQP HHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCC ETRPRILVSDTVGFIQKLPHDLVASFRSTLDEALEASLLLYVVDASDPTWAAQLEVTRTV CCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHH LRDIGADAVPSKLLFNKADRLDAAAKEALLAKHPDALLLSAHLPDDVAMLRKNIIAFFES HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHH SMVEADLVIPYSRQGRISEVYEHTTVVSQAYDESGSRLRVRGLPGAIAKLTQSFQE HHCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]