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The map label for this gene is fliM [H]

Identifier: 108763286

GI number: 108763286

Start: 2852232

End: 2853635

Strand: Direct

Name: fliM [H]

Synonym: MXAN_2445

Alternate gene names: 108763286

Gene position: 2852232-2853635 (Clockwise)

Preceding gene: 108760486

Following gene: 108758268

Centisome position: 31.21

GC content: 73.01

Gene sequence:

>1404_bases
ATGAGTCTCGAATCCGAGGACGAAGGATCGGGCGTCCACGAGCGCACGATGCTGGTGGACCTGAGCCAGCTCCGGCCTTC
GCGCCAGGCGCCTCCGCAGGAGTCCCCGGCATCCCAGGAGCCACCCGCCAGCCAGGAGCAACGCTGGCGGCCCTTCGCTT
TCCGGAACCTGGAGAAGGTCTCCCGGGCCCAGGGACTGCTCGCGGAGCGCTTGCGGTGGCTGACGCCCGCGGACGGCACG
GCGGTGGCCGTGGCGGCTCGGCTCACGGAGTTGTTCGACGCGGAGGTGCGCCTGACGGTGGAGTCCGTCCAGGTGCGGCC
CATGGCGGAGCTGCGGCGCTTCCTGGGCGACCCGACCTTCCTGGCGGTGCTCGCGCCCGGGGCGCTCCAGGGCCGGGCGG
TGCTGGAGGTGGAGCTCGCGCTGGCGCACGTGGCGGTGGACCTGCTGCTGGGCGGCGCCGGTGAGACGGTGGGCCTGCGG
CCGCTGACGGACATCGAGGAGGGCGTGATGGCCTACGTCGTCCTCGAGGGGCTCAAGCTGCTGGTGCCGGGGCTGCAGGC
GGCGGTGCCGCGCCCCCGGTTGGACGGCGTGGCGCGGGGCGTGGACGAGGTCTCCGCGCGGCTGGGGGATGATGGCCCCA
TGCTGGCGGTCCACCTGCAAGCGACGCTGGGGCCGCACAGCGGCATGGTGCGGCTGGTGGTGCCCGCGGCGGTGCTGGAC
GCGGCAGAGCCGGCGGTGGAGAGCACGCAGCGGCGGGCCCGGGGGAAGGCGGACCTGGAGGCCTTCGCGAGCCGCCTGTC
GGCGGTGCGCAGTTGGCTTCGCGCGGAGATTGGCTCGGCGGAGATTTCCGGCCAGGACCTGGCGAGCCTGCGGGTGAAGG
ACGTGCTGCTGGTGGACGCGTTGTCGGCGCGCACGGACAAGGGCGAGGCGGGCACCGCGCGGCTGCGGGTGGGGAAGGGG
ACGGCGGGGTGGGCCGAGGCGGAGGTGTTCGTCGGCGAGGACGGGCGCTACCAGGCGCGCATCACCGATTTCGTTCAAGG
AGAGCCGGGCCACCCGGGCTCCGCGGACGAGGCGAGCGCGGAGCCTGGGGATGAAGAAGAGGACTTCACGAACCCGGAGC
TGGACGTGCCTCCGGAACTGGAAGGGGCGGCCTTGGACGATGTGAGCAAGCCGGACGGAAGCGACCTGCTCGGAGACGTG
CCCCTGCAGATTGCGGTGGAGCTGGCGCGCGTGCCCGTCACCGCGCAGCAGGTGGTGGGGCTGCGCACCGGTCAGGTCCT
CGAGCTGAACCGGGGGCCGGGAGAGCCGGTGGAGCTGTCCGTCAACGGCAAGGTGGTGGCCCGGGGTGAGCTGGTGGAGT
TGGAAGGCCAGCTCGGCGTGCGCATCATCACCCTGGCGAGCTGA

Upstream 100 bases:

>100_bases
GCGAGGTGCTCAAGCAACTCGAGGGGGCCAGCGAGGGACTGCGGTCCGCGCTCAGTGGCCGTGGGCTCCGGCTTGAAGAC
GTCCGCTTCGAGGCGAAGGC

Downstream 100 bases:

>100_bases
GTCCCAGTCGGGGCAGGGCAGGCGAGCAGGAGCGGCCGGCCGGGCGTGGGCCCGTGGCGGTCCTCCGGCCGATGCACTAG
CCTCGCGCCCAGCCATGGCA

Product: type III secretion system apparatus protein YscQ/HrcQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MSLESEDEGSGVHERTMLVDLSQLRPSRQAPPQESPASQEPPASQEQRWRPFAFRNLEKVSRAQGLLAERLRWLTPADGT
AVAVAARLTELFDAEVRLTVESVQVRPMAELRRFLGDPTFLAVLAPGALQGRAVLEVELALAHVAVDLLLGGAGETVGLR
PLTDIEEGVMAYVVLEGLKLLVPGLQAAVPRPRLDGVARGVDEVSARLGDDGPMLAVHLQATLGPHSGMVRLVVPAAVLD
AAEPAVESTQRRARGKADLEAFASRLSAVRSWLRAEIGSAEISGQDLASLRVKDVLLVDALSARTDKGEAGTARLRVGKG
TAGWAEAEVFVGEDGRYQARITDFVQGEPGHPGSADEASAEPGDEEEDFTNPELDVPPELEGAALDDVSKPDGSDLLGDV
PLQIAVELARVPVTAQQVVGLRTGQVLELNRGPGEPVELSVNGKVVARGELVELEGQLGVRIITLAS

Sequences:

>Translated_467_residues
MSLESEDEGSGVHERTMLVDLSQLRPSRQAPPQESPASQEPPASQEQRWRPFAFRNLEKVSRAQGLLAERLRWLTPADGT
AVAVAARLTELFDAEVRLTVESVQVRPMAELRRFLGDPTFLAVLAPGALQGRAVLEVELALAHVAVDLLLGGAGETVGLR
PLTDIEEGVMAYVVLEGLKLLVPGLQAAVPRPRLDGVARGVDEVSARLGDDGPMLAVHLQATLGPHSGMVRLVVPAAVLD
AAEPAVESTQRRARGKADLEAFASRLSAVRSWLRAEIGSAEISGQDLASLRVKDVLLVDALSARTDKGEAGTARLRVGKG
TAGWAEAEVFVGEDGRYQARITDFVQGEPGHPGSADEASAEPGDEEEDFTNPELDVPPELEGAALDDVSKPDGSDLLGDV
PLQIAVELARVPVTAQQVVGLRTGQVLELNRGPGEPVELSVNGKVVARGELVELEGQLGVRIITLAS
>Mature_466_residues
SLESEDEGSGVHERTMLVDLSQLRPSRQAPPQESPASQEPPASQEQRWRPFAFRNLEKVSRAQGLLAERLRWLTPADGTA
VAVAARLTELFDAEVRLTVESVQVRPMAELRRFLGDPTFLAVLAPGALQGRAVLEVELALAHVAVDLLLGGAGETVGLRP
LTDIEEGVMAYVVLEGLKLLVPGLQAAVPRPRLDGVARGVDEVSARLGDDGPMLAVHLQATLGPHSGMVRLVVPAAVLDA
AEPAVESTQRRARGKADLEAFASRLSAVRSWLRAEIGSAEISGQDLASLRVKDVLLVDALSARTDKGEAGTARLRVGKGT
AGWAEAEVFVGEDGRYQARITDFVQGEPGHPGSADEASAEPGDEEEDFTNPELDVPPELEGAALDDVSKPDGSDLLGDVP
LQIAVELARVPVTAQQVVGLRTGQVLELNRGPGEPVELSVNGKVVARGELVELEGQLGVRIITLAS

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 49508; Mature: 49376

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLESEDEGSGVHERTMLVDLSQLRPSRQAPPQESPASQEPPASQEQRWRPFAFRNLEKV
CCCCCCCCCCCCCHHHHEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH
SRAQGLLAERLRWLTPADGTAVAVAARLTELFDAEVRLTVESVQVRPMAELRRFLGDPTF
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEHCCCCCHHHHHHHHCCCEE
LAVLAPGALQGRAVLEVELALAHVAVDLLLGGAGETVGLRPLTDIEEGVMAYVVLEGLKL
EEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVPGLQAAVPRPRLDGVARGVDEVSARLGDDGPMLAVHLQATLGPHSGMVRLVVPAAVLD
HHCCHHHHCCCCCHHHHHHCHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEHHHHHHH
AAEPAVESTQRRARGKADLEAFASRLSAVRSWLRAEIGSAEISGQDLASLRVKDVLLVDA
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEHH
LSARTDKGEAGTARLRVGKGTAGWAEAEVFVGEDGRYQARITDFVQGEPGHPGSADEASA
HHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCC
EPGDEEEDFTNPELDVPPELEGAALDDVSKPDGSDLLGDVPLQIAVELARVPVTAQQVVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHC
LRTGQVLELNRGPGEPVELSVNGKVVARGELVELEGQLGVRIITLAS
CCCCCEEEECCCCCCCEEEEECCEEEECCEEEEECCCCCEEEEEEEC
>Mature Secondary Structure 
SLESEDEGSGVHERTMLVDLSQLRPSRQAPPQESPASQEPPASQEQRWRPFAFRNLEKV
CCCCCCCCCCCCHHHHEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH
SRAQGLLAERLRWLTPADGTAVAVAARLTELFDAEVRLTVESVQVRPMAELRRFLGDPTF
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEEHCCCCCHHHHHHHHCCCEE
LAVLAPGALQGRAVLEVELALAHVAVDLLLGGAGETVGLRPLTDIEEGVMAYVVLEGLKL
EEEECCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVPGLQAAVPRPRLDGVARGVDEVSARLGDDGPMLAVHLQATLGPHSGMVRLVVPAAVLD
HHCCHHHHCCCCCHHHHHHCHHHHHHHCCCCCCEEEEEEEEECCCCCCEEEEEHHHHHHH
AAEPAVESTQRRARGKADLEAFASRLSAVRSWLRAEIGSAEISGQDLASLRVKDVLLVDA
HCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEHH
LSARTDKGEAGTARLRVGKGTAGWAEAEVFVGEDGRYQARITDFVQGEPGHPGSADEASA
HHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCCCCCCCC
EPGDEEEDFTNPELDVPPELEGAALDDVSKPDGSDLLGDVPLQIAVELARVPVTAQQVVG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHC
LRTGQVLELNRGPGEPVELSVNGKVVARGELVELEGQLGVRIITLAS
CCCCCEEEECCCCCCCEEEEECCEEEECCEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]