| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763262
Identifier: 108763262
GI number: 108763262
Start: 2848741
End: 2849412
Strand: Direct
Name: 108763262
Synonym: MXAN_2441
Alternate gene names: NA
Gene position: 2848741-2849412 (Clockwise)
Preceding gene: 108763869
Following gene: 108762697
Centisome position: 31.17
GC content: 68.6
Gene sequence:
>672_bases ATGGCGATCGGAAAGGTGATTCGAGGTGATGGGACGGCGGAGCCGGCGCACGCGCCCGAGCGTCCCGTGCTGCGGCCTCC CCGCGCGGGAGTGATGAACGCCGAGGTCTTCGAGGCCCGACAGGGCGCGTCGGCCATCCTGGAGGAGGCGCAGCGCGAGA AGGAGCGCATCCTCGCGGAGGCGCAGCGCGAGCGCGAGGACCTCCTCGCCAAGACGCGTGAGCAGGGCCGCCAAGAAGGC CTGGCGCAGGCCACCGAAATCATCCTTCGCGCGAAGATGCAGGCGGGGGAGGTGCTGACCGGCCACGAGCAGGACGTCAT CGCGCTGTCGCTCAAGGTGGCGGAGAAGATCATCGGCCGGAGCCTGGAGAAGGACCCGGAGCTGATGGTGGAGCTGTGCG CCGCTGCCATCGAGAACCTGCGCAGCGCCCGCTCCATGATTCTGCGGGTCCACCCGAAGACGGCCGCCGTGCTCCGCGCG AAGAAGCCGGTCCTGATGGAACTCATCGGCCGCGCGGTGGATCTGGCCATCAAGGAGGACCCCGAGGTGGCCCCCGTGGG CTGCATCGTCCAGACGGAGTTCGGCACGGTGGACGCACAGCTTCCCACGCAGTTGGAGATGCTCCAGAACATCCTGTTGC CGGACACCGCGCGTAAGGAAGGGCCGGCTTGA
Upstream 100 bases:
>100_bases CCGCTCTCCGTCGGGTACCGACCGTCCTGTGCCTCCGGGTGCAGGGGGACGTGGAACCAAGGGCGGAACGCGCTAGCATC CGGCTCGCAAGGAGCGGCCC
Downstream 100 bases:
>100_bases GCCGGAGCGTCAAGGGACTCGCCCATGGCCATTGACCTCTCGCGGTACTTCGACCTCATCAAGGAAGCGCAGGTCGTGCG CGTGCGCGGCCGCGTCACGG
Product: FliH family protein
Products: NA
Alternate protein names: Type III Secretion System Protein; Flagellar Assembly Protein H; Flagellar Assembly Protein; Flih Family Protein; H+Transporting Two-Sector ATPase E Subunit; FliH Family Protein; Flagellar Assembly Protein Flih; Flagellar Biosynthesis/Type III Secretory Pathway Protein
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MAIGKVIRGDGTAEPAHAPERPVLRPPRAGVMNAEVFEARQGASAILEEAQREKERILAEAQREREDLLAKTREQGRQEG LAQATEIILRAKMQAGEVLTGHEQDVIALSLKVAEKIIGRSLEKDPELMVELCAAAIENLRSARSMILRVHPKTAAVLRA KKPVLMELIGRAVDLAIKEDPEVAPVGCIVQTEFGTVDAQLPTQLEMLQNILLPDTARKEGPA
Sequences:
>Translated_223_residues MAIGKVIRGDGTAEPAHAPERPVLRPPRAGVMNAEVFEARQGASAILEEAQREKERILAEAQREREDLLAKTREQGRQEG LAQATEIILRAKMQAGEVLTGHEQDVIALSLKVAEKIIGRSLEKDPELMVELCAAAIENLRSARSMILRVHPKTAAVLRA KKPVLMELIGRAVDLAIKEDPEVAPVGCIVQTEFGTVDAQLPTQLEMLQNILLPDTARKEGPA >Mature_222_residues AIGKVIRGDGTAEPAHAPERPVLRPPRAGVMNAEVFEARQGASAILEEAQREKERILAEAQREREDLLAKTREQGRQEGL AQATEIILRAKMQAGEVLTGHEQDVIALSLKVAEKIIGRSLEKDPELMVELCAAAIENLRSARSMILRVHPKTAAVLRAK KPVLMELIGRAVDLAIKEDPEVAPVGCIVQTEFGTVDAQLPTQLEMLQNILLPDTARKEGPA
Specific function: Unknown
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24322; Mature: 24190
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGKVIRGDGTAEPAHAPERPVLRPPRAGVMNAEVFEARQGASAILEEAQREKERILAE CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH AQREREDLLAKTREQGRQEGLAQATEIILRAKMQAGEVLTGHEQDVIALSLKVAEKIIGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC SLEKDPELMVELCAAAIENLRSARSMILRVHPKTAAVLRAKKPVLMELIGRAVDLAIKED CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCC PEVAPVGCIVQTEFGTVDAQLPTQLEMLQNILLPDTARKEGPA CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AIGKVIRGDGTAEPAHAPERPVLRPPRAGVMNAEVFEARQGASAILEEAQREKERILAE CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH AQREREDLLAKTREQGRQEGLAQATEIILRAKMQAGEVLTGHEQDVIALSLKVAEKIIGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC SLEKDPELMVELCAAAIENLRSARSMILRVHPKTAAVLRAKKPVLMELIGRAVDLAIKED CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCC PEVAPVGCIVQTEFGTVDAQLPTQLEMLQNILLPDTARKEGPA CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA