| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763254
Identifier: 108763254
GI number: 108763254
Start: 444118
End: 445479
Strand: Reverse
Name: 108763254
Synonym: MXAN_0379
Alternate gene names: NA
Gene position: 445479-444118 (Counterclockwise)
Preceding gene: 108757887
Following gene: 108759497
Centisome position: 4.87
GC content: 70.26
Gene sequence:
>1362_bases ATGAAGACCGTTCCCTGCCTGCTCGCATGGTCCGCGATGTTGTTCCTGTCCGGGTGTGCGGACACCGGCGATGACTGCGA CCTCGTCCCGCTGCCAGGAGGCCTGGGACAGCTCCCGCCCCTGCTGTCGCTGGAGCTCCCGGCGGAGCTCCATGTCCAGC CGAGCCTGAACTCCACCTGTGAGGGCCTCGATACTTCCCAGGTCCCCGACAGCATCACGGCGGAGGTGTTCGACCCGAAC AACCACGCCGTGGCCTCGGAGGCGTCCCTCACCGGCAATGGACAGGCGGCCACCGTCCGCTTCACCCCGACGACCACCGG ACGCCACCACGTCCGCGTCGCCTTCGCCCCGGTGGGCAGCCTCCAGCAGTTCGGCGCCTACGTGTCACGCGCGTGGACCG GAGGAGAGCCGACAGTGCTCCCGCTGCCCCGCTGCACGCAACTGGACCGCACCACGCATGGCACCTGGCTGTGTGACGGT GTGGCGGTGCACACGGCGAACGGAACCCAGACGCCACTCGGCGGCGTCTCCGGCATGCCCGACGTGGCCGTCGCGGGAGA TGTCGTCTGGGTCGTGGGCGAGGACCGGGTGCGCCGCTTCGTCGACACGGGCTCGGAACTCGAACTCACCGGCTCGCTCC TGCTCAACCAGCGCGACACCATGAAGGTCATCCAGAACCGGCTCGCCACCGCGGATGAGCTGTGGGTGCTCGACTCGGAG CGCCTGCACCGCTTTGCCTTCACCTCAGAAGGTGTCGTCGTTGGTGCCACCCCCACTCCGTGGGGACGGGCCAACCAGTT GCCCTTCGGCGTCGACATGGTGCTGGGCCTGCTCGTGCGTCTGGGCCCCGACACGGTCAGCGTCATCCAGGTGACGCAGG AACCCGACAGCCGCGCGTGCACGTTCCGGTTGGGCCCGAGCGGGGCCTTCGTCGCCTCGGAGGCGCCGTGTCAGCGCCTG CCGGGCGTGCCAGCGGGCATCGAGGCTGGCGCGGTGTGGACCCGCGTGGACACCCTGCTCCCGCCGCAGCCAGGACAGAC GCTGTACCGGTGGGCCGCGGTGGATGGCGCGCTGACCGAACGAGGCACCCTGGTCGTGGACGCGCCGCTCGAGTTGGTGA GCGCGCCCCTCCGCCCCGGCTTCGCCATCCCCTTCATCCAGTGGCGGCAGTCACGCATCGGCTCCGCAGTGCCCGTGCCG CCCGAGTCACAGGGCCCGCTGGGACTGGAGCTGCTGCCGGGCAACGCGGACCTGTCTCCCGGACTGCGAACCCTCTCTCC GCGCTTCTACTGGGAGGCCGGCGGCGGGCAGGGCCTCGGCGGCACGCGGGTGTACGAACGGCGTGCGTCTTCGTTGAAAT AA
Upstream 100 bases:
>100_bases CACCACGCCTGTCACCGGCCCGGCCAGCGGATGGGGTAAGAAGGCCCTGGAGCCTGCGCCGCCTCCCCCAGGCCGAGGTC ACCCGGGCGGCGTCCCCTCG
Downstream 100 bases:
>100_bases CGAGACGGTTGGGGCACACACGGAAGGAAAGCGCGAAATGTCGCCTGCCTGCCTCTCGCGATACCTGGCCTTCCGGGTGT AGAGAGGCCCGCGCGCCGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MKTVPCLLAWSAMLFLSGCADTGDDCDLVPLPGGLGQLPPLLSLELPAELHVQPSLNSTCEGLDTSQVPDSITAEVFDPN NHAVASEASLTGNGQAATVRFTPTTTGRHHVRVAFAPVGSLQQFGAYVSRAWTGGEPTVLPLPRCTQLDRTTHGTWLCDG VAVHTANGTQTPLGGVSGMPDVAVAGDVVWVVGEDRVRRFVDTGSELELTGSLLLNQRDTMKVIQNRLATADELWVLDSE RLHRFAFTSEGVVVGATPTPWGRANQLPFGVDMVLGLLVRLGPDTVSVIQVTQEPDSRACTFRLGPSGAFVASEAPCQRL PGVPAGIEAGAVWTRVDTLLPPQPGQTLYRWAAVDGALTERGTLVVDAPLELVSAPLRPGFAIPFIQWRQSRIGSAVPVP PESQGPLGLELLPGNADLSPGLRTLSPRFYWEAGGGQGLGGTRVYERRASSLK
Sequences:
>Translated_453_residues MKTVPCLLAWSAMLFLSGCADTGDDCDLVPLPGGLGQLPPLLSLELPAELHVQPSLNSTCEGLDTSQVPDSITAEVFDPN NHAVASEASLTGNGQAATVRFTPTTTGRHHVRVAFAPVGSLQQFGAYVSRAWTGGEPTVLPLPRCTQLDRTTHGTWLCDG VAVHTANGTQTPLGGVSGMPDVAVAGDVVWVVGEDRVRRFVDTGSELELTGSLLLNQRDTMKVIQNRLATADELWVLDSE RLHRFAFTSEGVVVGATPTPWGRANQLPFGVDMVLGLLVRLGPDTVSVIQVTQEPDSRACTFRLGPSGAFVASEAPCQRL PGVPAGIEAGAVWTRVDTLLPPQPGQTLYRWAAVDGALTERGTLVVDAPLELVSAPLRPGFAIPFIQWRQSRIGSAVPVP PESQGPLGLELLPGNADLSPGLRTLSPRFYWEAGGGQGLGGTRVYERRASSLK >Mature_453_residues MKTVPCLLAWSAMLFLSGCADTGDDCDLVPLPGGLGQLPPLLSLELPAELHVQPSLNSTCEGLDTSQVPDSITAEVFDPN NHAVASEASLTGNGQAATVRFTPTTTGRHHVRVAFAPVGSLQQFGAYVSRAWTGGEPTVLPLPRCTQLDRTTHGTWLCDG VAVHTANGTQTPLGGVSGMPDVAVAGDVVWVVGEDRVRRFVDTGSELELTGSLLLNQRDTMKVIQNRLATADELWVLDSE RLHRFAFTSEGVVVGATPTPWGRANQLPFGVDMVLGLLVRLGPDTVSVIQVTQEPDSRACTFRLGPSGAFVASEAPCQRL PGVPAGIEAGAVWTRVDTLLPPQPGQTLYRWAAVDGALTERGTLVVDAPLELVSAPLRPGFAIPFIQWRQSRIGSAVPVP PESQGPLGLELLPGNADLSPGLRTLSPRFYWEAGGGQGLGGTRVYERRASSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47979; Mature: 47979
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVPCLLAWSAMLFLSGCADTGDDCDLVPLPGGLGQLPPLLSLELPAELHVQPSLNSTC CCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEECCCEEEECCCCCCHH EGLDTSQVPDSITAEVFDPNNHAVASEASLTGNGQAATVRFTPTTTGRHHVRVAFAPVGS CCCCCCCCCCCCEEEEECCCCCEEECCCEECCCCCEEEEEECCCCCCCEEEEEEEECCCC LQQFGAYVSRAWTGGEPTVLPLPRCTQLDRTTHGTWLCDGVAVHTANGTQTPLGGVSGMP HHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCC DVAVAGDVVWVVGEDRVRRFVDTGSELELTGSLLLNQRDTMKVIQNRLATADELWVLDSE CEEECCCEEEEECHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHCCCHHEEEECHH RLHRFAFTSEGVVVGATPTPWGRANQLPFGVDMVLGLLVRLGPDTVSVIQVTQEPDSRAC HHHEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCEE TFRLGPSGAFVASEAPCQRLPGVPAGIEAGAVWTRVDTLLPPQPGQTLYRWAAVDGALTE EEEECCCCCEEECCCCHHHCCCCCCCCCCCEEEEHHHHCCCCCCCCCEEEEEECCCCCCC RGTLVVDAPLELVSAPLRPGFAIPFIQWRQSRIGSAVPVPPESQGPLGLELLPGNADLSP CCEEEEECCHHHHHCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC GLRTLSPRFYWEAGGGQGLGGTRVYERRASSLK CHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MKTVPCLLAWSAMLFLSGCADTGDDCDLVPLPGGLGQLPPLLSLELPAELHVQPSLNSTC CCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCEEEECCCEEEECCCCCCHH EGLDTSQVPDSITAEVFDPNNHAVASEASLTGNGQAATVRFTPTTTGRHHVRVAFAPVGS CCCCCCCCCCCCEEEEECCCCCEEECCCEECCCCCEEEEEECCCCCCCEEEEEEEECCCC LQQFGAYVSRAWTGGEPTVLPLPRCTQLDRTTHGTWLCDGVAVHTANGTQTPLGGVSGMP HHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCC DVAVAGDVVWVVGEDRVRRFVDTGSELELTGSLLLNQRDTMKVIQNRLATADELWVLDSE CEEECCCEEEEECHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHCCCHHEEEECHH RLHRFAFTSEGVVVGATPTPWGRANQLPFGVDMVLGLLVRLGPDTVSVIQVTQEPDSRAC HHHEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCEE TFRLGPSGAFVASEAPCQRLPGVPAGIEAGAVWTRVDTLLPPQPGQTLYRWAAVDGALTE EEEECCCCCEEECCCCHHHCCCCCCCCCCCEEEEHHHHCCCCCCCCCEEEEEECCCCCCC RGTLVVDAPLELVSAPLRPGFAIPFIQWRQSRIGSAVPVPPESQGPLGLELLPGNADLSP CCEEEEECCHHHHHCCCCCCEECCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC GLRTLSPRFYWEAGGGQGLGGTRVYERRASSLK CHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA