| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is paaK [C]
Identifier: 108763250
GI number: 108763250
Start: 360460
End: 361779
Strand: Reverse
Name: paaK [C]
Synonym: MXAN_0305
Alternate gene names: 108763250
Gene position: 361779-360460 (Counterclockwise)
Preceding gene: 108763158
Following gene: 108757104
Centisome position: 3.96
GC content: 72.58
Gene sequence:
>1320_bases GTGGCGGGAGTGACGGAAGTCCTGCCCGCGGACCTGCGCGTCGCGCCTCGCGCGAACATCCGCCGGGACACCTCCTCGCA GCGCCCCCACATCCCCTGGGCCGAGTCCATCGCCCAGGGACTGGCCCGCTTCGCGTCCCTGGCTGACGAGGACGCGGCCC GCGCGGACCTGGACGCCCGGTTGTCCTTCCTGCGCGGTGCGCTGCGGGACTCGCCGTACCACGCCCGGAGGCTCCACGCG GCGGGCATCCACCCGGGTGACCTCCAGACGCTGGACGACCTGAGCCACCTGCCCTTCCTGGACCGCGGGGCCCTGGCCGC GAACTGGGACGCGGTGCCCACGCTGCCGGCGGACGCCGATGATTGCGTGGTGGTGAAGAGCTCCGGGTCCACCGGAGCGC CGGTGAACGTGGTGAGGGACCGGCGCGACTGCCTGCACATGTGGGCCGTGCTGCGGTTCCTCGTGGCGCGCGCGGGAGCG GTGCTGCCCTCGCATCCCCGGGTGGTGCTACTGGACGCGCTGCCGGGCGGGCTGGAGTACTCGGTGCGCCTGCCCATCCT CCACGACGGCGCGCTGCACCGAATCTCCGTCCTTCGCGAGGACGCGCTCCAACGCCTGCGCCGCGTGCGGCCTGCCGTGC TCTTCTCCGACCCGGAAGGACTGCGGTGGCTGGCGGCCCAGCGCGACGTGCCCTCGCCCGAGCTGGTGCTCACCTCCGCG CAACACCTGCCCGCCGGCCTGCGCGCAGAGCTGGCGAACGCGGTGCCCGCGCCTGTCCTCAACTACTACGCGACGACGGA GACGGGACCGCTGGCCTGGGAGTGCCTGCGGCCCGAGGCTCCTGGCCGGTTCCACGTCCTGGCTCCGGATGTCTGGTTGG AGCCCGAACAGGACGAGGTGGTGGTGACGCGGCTGCGTCCCAGCGTGCTACCGCTGCTGCGCTACCTCCCGGGCGACGCG GGCAGCGTGCGGCGTGACGCCTGCGCTTGTGGGTTTCATGGATGGACGCTGGAGCACTTCGGCGGGCGCGGAGCCAGCCA CTTCGCCACGCCTTCGGGCCGGGAGGTGGATGCCTGGGCGCTGGCCTGGGTGTTCAAGCACCATGCGCTGCGTGGCTTCC GACTGACACAAGTGGACGTCTCGCACTTCCAACTGGAGCTGGCGGGAGCGAGCCATGCGGACGTGGCGCCACTGCGCGAG CGGCTCACCGGCGCCTTGCGGAACCTGGGTTGGACGCAGGCGCGCCTGGACGTGTGTCACGTGGAGGTATCGGCGCTGGC CGTGGGCACCAAGCCACAGCCGTTCCGCCGGCTGCGCTGA
Upstream 100 bases:
>100_bases AAGCGGAGATGCGGCGCGCGGAGGAGGCCCGGAAGAAGGAGGCGGACAAACGCCAGCAGGCCCTCCGCGAGGCGGAGCAG CGCGCCACGGAGGCGCGTGG
Downstream 100 bases:
>100_bases GCAGCCTTGCATGACAGCGCGGCGAGCAAGATGTCATGCAGTGGGTTCCGGTGCTTACCTGAGAAGTGCGCGGCTCCTCC CCAGCGGTATGCATGCAGCC
Product: hypothetical protein
Products: AMP; Phenylacetyl-CoA; Diphosphate [C]
Alternate protein names: CapK Protein; AMP-Dependent Synthetase And Ligase; Phenylacetate-CoA Ligase
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MAGVTEVLPADLRVAPRANIRRDTSSQRPHIPWAESIAQGLARFASLADEDAARADLDARLSFLRGALRDSPYHARRLHA AGIHPGDLQTLDDLSHLPFLDRGALAANWDAVPTLPADADDCVVVKSSGSTGAPVNVVRDRRDCLHMWAVLRFLVARAGA VLPSHPRVVLLDALPGGLEYSVRLPILHDGALHRISVLREDALQRLRRVRPAVLFSDPEGLRWLAAQRDVPSPELVLTSA QHLPAGLRAELANAVPAPVLNYYATTETGPLAWECLRPEAPGRFHVLAPDVWLEPEQDEVVVTRLRPSVLPLLRYLPGDA GSVRRDACACGFHGWTLEHFGGRGASHFATPSGREVDAWALAWVFKHHALRGFRLTQVDVSHFQLELAGASHADVAPLRE RLTGALRNLGWTQARLDVCHVEVSALAVGTKPQPFRRLR
Sequences:
>Translated_439_residues MAGVTEVLPADLRVAPRANIRRDTSSQRPHIPWAESIAQGLARFASLADEDAARADLDARLSFLRGALRDSPYHARRLHA AGIHPGDLQTLDDLSHLPFLDRGALAANWDAVPTLPADADDCVVVKSSGSTGAPVNVVRDRRDCLHMWAVLRFLVARAGA VLPSHPRVVLLDALPGGLEYSVRLPILHDGALHRISVLREDALQRLRRVRPAVLFSDPEGLRWLAAQRDVPSPELVLTSA QHLPAGLRAELANAVPAPVLNYYATTETGPLAWECLRPEAPGRFHVLAPDVWLEPEQDEVVVTRLRPSVLPLLRYLPGDA GSVRRDACACGFHGWTLEHFGGRGASHFATPSGREVDAWALAWVFKHHALRGFRLTQVDVSHFQLELAGASHADVAPLRE RLTGALRNLGWTQARLDVCHVEVSALAVGTKPQPFRRLR >Mature_438_residues AGVTEVLPADLRVAPRANIRRDTSSQRPHIPWAESIAQGLARFASLADEDAARADLDARLSFLRGALRDSPYHARRLHAA GIHPGDLQTLDDLSHLPFLDRGALAANWDAVPTLPADADDCVVVKSSGSTGAPVNVVRDRRDCLHMWAVLRFLVARAGAV LPSHPRVVLLDALPGGLEYSVRLPILHDGALHRISVLREDALQRLRRVRPAVLFSDPEGLRWLAAQRDVPSPELVLTSAQ HLPAGLRAELANAVPAPVLNYYATTETGPLAWECLRPEAPGRFHVLAPDVWLEPEQDEVVVTRLRPSVLPLLRYLPGDAG SVRRDACACGFHGWTLEHFGGRGASHFATPSGREVDAWALAWVFKHHALRGFRLTQVDVSHFQLELAGASHADVAPLRER LTGALRNLGWTQARLDVCHVEVSALAVGTKPQPFRRLR
Specific function: Catalyzes The Activation Of Phenylacetic Acid To Phenylacetyl-CoA. [C]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.2.1.30 [C]
Molecular weight: Translated: 48085; Mature: 47954
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVTEVLPADLRVAPRANIRRDTSSQRPHIPWAESIAQGLARFASLADEDAARADLDAR CCCCHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH LSFLRGALRDSPYHARRLHAAGIHPGDLQTLDDLSHLPFLDRGALAANWDAVPTLPADAD HHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCC DCVVVKSSGSTGAPVNVVRDRRDCLHMWAVLRFLVARAGAVLPSHPRVVLLDALPGGLEY CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEE SVRLPILHDGALHRISVLREDALQRLRRVRPAVLFSDPEGLRWLAAQRDVPSPELVLTSA EEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEHHHCCCCCCCCEEEECH QHLPAGLRAELANAVPAPVLNYYATTETGPLAWECLRPEAPGRFHVLAPDVWLEPEQDEV HHCCCHHHHHHHHCCCHHHHHHEECCCCCCCEEEEECCCCCCEEEEECCCEECCCCCCCE VVTRLRPSVLPLLRYLPGDAGSVRRDACACGFHGWTLEHFGGRGASHFATPSGREVDAWA EEEECCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHH LAWVFKHHALRGFRLTQVDVSHFQLELAGASHADVAPLRERLTGALRNLGWTQARLDVCH HHHHHHHHHHCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHEEEE VEVSALAVGTKPQPFRRLR EEEEEEEECCCCCHHHCCC >Mature Secondary Structure AGVTEVLPADLRVAPRANIRRDTSSQRPHIPWAESIAQGLARFASLADEDAARADLDAR CCCHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH LSFLRGALRDSPYHARRLHAAGIHPGDLQTLDDLSHLPFLDRGALAANWDAVPTLPADAD HHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCC DCVVVKSSGSTGAPVNVVRDRRDCLHMWAVLRFLVARAGAVLPSHPRVVLLDALPGGLEY CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEE SVRLPILHDGALHRISVLREDALQRLRRVRPAVLFSDPEGLRWLAAQRDVPSPELVLTSA EEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEHHHCCCCCCCCEEEECH QHLPAGLRAELANAVPAPVLNYYATTETGPLAWECLRPEAPGRFHVLAPDVWLEPEQDEV HHCCCHHHHHHHHCCCHHHHHHEECCCCCCCEEEEECCCCCCEEEEECCCEECCCCCCCE VVTRLRPSVLPLLRYLPGDAGSVRRDACACGFHGWTLEHFGGRGASHFATPSGREVDAWA EEEECCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHH LAWVFKHHALRGFRLTQVDVSHFQLELAGASHADVAPLRERLTGALRNLGWTQARLDVCH HHHHHHHHHHCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHEEEE VEVSALAVGTKPQPFRRLR EEEEEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; Coenzyme A; Phenylacetic acid [C]
Specific reaction: ATP + Coenzyme A + Phenylacetic acid --> AMP + Phenylacetyl-CoA + Diphosphate [C]
General reaction: Forming of carbon sulfur bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA