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The map label for this gene is prt1 [H]

Identifier: 108763220

GI number: 108763220

Start: 4916328

End: 4917482

Strand: Reverse

Name: prt1 [H]

Synonym: MXAN_4013

Alternate gene names: 108763220

Gene position: 4917482-4916328 (Counterclockwise)

Preceding gene: 108759160

Following gene: 108760125

Centisome position: 53.8

GC content: 65.37

Gene sequence:

>1155_bases
ATGTTCCACCCAACACGACACCGGCACTCCATTCACTGCATCCTGCCGCCATACCTGGCTCGCTCCATCGCGGAGAACGG
CACCAGCGAACAACGTGAGCGCGTCCTGCGGACGCTTTCCACGGATTCGACGTTCCGTGCGCTCCGGCTCGCGGGGAGCA
GAACGACCCCGTCGACGCTCGTCACCCGTCCCAGGGCGATGATGGTGGAATCCGCGCTGCATCGGACCATCTACGACTTG
AGGAACAGTGAGGCGTTTCCTGGCACGCCTGTTCGCTTCGAGGGACAGGAGGCGACGGACGACATCGCCGTCACTGAGGC
CTATGACGGCCTGGGAGACACCTACAACTTCTTCTGGGAGATTTTCGGGCGCAGTTCCATCGACGGAGATGGGATGCCGC
TGCAGGCCTTCGTCCATTACGGGAACACCTACGACAACGCCTTCTGGGATGGCCGGCGCATGGTGTTCGGGGATGGGGAC
GGCGACCTCTTCAACCGCTTCACCATCTGCCTGGACATCATCGCGCACGAACTCGCGCACGGTGTCACCGAGGACGAGGG
GCCGCTCTGGTACTTCCGCCAGGCGGGCGCGCTCAACGAGTCCATGTCCGACGTCTTCGGCTCGCTGGTGCGCCAGATGA
AGCTCAAGCAGAAGGCGGATGCGGCGGACTGGCTCATCGGCAAGGAACTCCTCACCGGCAACGTGGAGGGAGTCGCGCTG
CGCTCCATGAAGAATCCGGGGACGGCCTTCGATGACGACGTGCTGGGCAAGGACCCTCAGCCCGGGCACATGAAGGACTA
CGTCCATACGTGGGAGGACAACGGGGGGGGGCACATCAACTCCGGTATCCCCAACCGGGCGTTCTACCTGGTTGCGTCGC
ACCTGGGCGGCTACGCCTGGGAGCGGGCGGGGCGCATCTGGTACGACGCCATTCGCGACTCACACATCAAGCCCGACATG
GGCTTCCTCGACTTTGCGCGCATCACCGTGATGTCCGCGACGCGCTTGTTCGGCGCGGGAGAGGAGGAAGACGCGGTCCG
GGAGGCCTGGGAGCAGGTGGGCATCCGCGTCGCCCGGTCTGGTGTCCGCATGCCCGCGTTCGTCGGCGCCGTCACCCAGC
CTTCGCCACAAGCGGGGCGCGCCCCCAGGGCGTGA

Upstream 100 bases:

>100_bases
CTCCTTCAGGACGGCGGAGCCCGTGCGCGGCCGAGTCGCCCGAAGGGAGGTCCGGCGTTCCTACCCTCGTGGCTGAGCCC
ATTCAGCAGAGGGATTCGTC

Downstream 100 bases:

>100_bases
GGGCTGCGCCGCGGCTGCCATGCGCATCGAACTCAAGCGTGAAGGCGGGCCGGCCTACTTCCCTGGGCTGGCTCGGCCAA
GAGTGGTGGACCTGACGAGC

Product: M4 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MFHPTRHRHSIHCILPPYLARSIAENGTSEQRERVLRTLSTDSTFRALRLAGSRTTPSTLVTRPRAMMVESALHRTIYDL
RNSEAFPGTPVRFEGQEATDDIAVTEAYDGLGDTYNFFWEIFGRSSIDGDGMPLQAFVHYGNTYDNAFWDGRRMVFGDGD
GDLFNRFTICLDIIAHELAHGVTEDEGPLWYFRQAGALNESMSDVFGSLVRQMKLKQKADAADWLIGKELLTGNVEGVAL
RSMKNPGTAFDDDVLGKDPQPGHMKDYVHTWEDNGGGHINSGIPNRAFYLVASHLGGYAWERAGRIWYDAIRDSHIKPDM
GFLDFARITVMSATRLFGAGEEEDAVREAWEQVGIRVARSGVRMPAFVGAVTQPSPQAGRAPRA

Sequences:

>Translated_384_residues
MFHPTRHRHSIHCILPPYLARSIAENGTSEQRERVLRTLSTDSTFRALRLAGSRTTPSTLVTRPRAMMVESALHRTIYDL
RNSEAFPGTPVRFEGQEATDDIAVTEAYDGLGDTYNFFWEIFGRSSIDGDGMPLQAFVHYGNTYDNAFWDGRRMVFGDGD
GDLFNRFTICLDIIAHELAHGVTEDEGPLWYFRQAGALNESMSDVFGSLVRQMKLKQKADAADWLIGKELLTGNVEGVAL
RSMKNPGTAFDDDVLGKDPQPGHMKDYVHTWEDNGGGHINSGIPNRAFYLVASHLGGYAWERAGRIWYDAIRDSHIKPDM
GFLDFARITVMSATRLFGAGEEEDAVREAWEQVGIRVARSGVRMPAFVGAVTQPSPQAGRAPRA
>Mature_384_residues
MFHPTRHRHSIHCILPPYLARSIAENGTSEQRERVLRTLSTDSTFRALRLAGSRTTPSTLVTRPRAMMVESALHRTIYDL
RNSEAFPGTPVRFEGQEATDDIAVTEAYDGLGDTYNFFWEIFGRSSIDGDGMPLQAFVHYGNTYDNAFWDGRRMVFGDGD
GDLFNRFTICLDIIAHELAHGVTEDEGPLWYFRQAGALNESMSDVFGSLVRQMKLKQKADAADWLIGKELLTGNVEGVAL
RSMKNPGTAFDDDVLGKDPQPGHMKDYVHTWEDNGGGHINSGIPNRAFYLVASHLGGYAWERAGRIWYDAIRDSHIKPDM
GFLDFARITVMSATRLFGAGEEEDAVREAWEQVGIRVARSGVRMPAFVGAVTQPSPQAGRAPRA

Specific function: Unknown

COG id: COG3227

COG function: function code E; Zinc metalloprotease (elastase)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013856
- InterPro:   IPR001570 [H]

Pfam domain/function: PF01447 Peptidase_M4; PF02868 Peptidase_M4_C [H]

EC number: NA

Molecular weight: Translated: 42791; Mature: 42791

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHPTRHRHSIHCILPPYLARSIAENGTSEQRERVLRTLSTDSTFRALRLAGSRTTPSTL
CCCCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
VTRPRAMMVESALHRTIYDLRNSEAFPGTPVRFEGQEATDDIAVTEAYDGLGDTYNFFWE
HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEHHHCCCCHHHHHHHH
IFGRSSIDGDGMPLQAFVHYGNTYDNAFWDGRRMVFGDGDGDLFNRFTICLDIIAHELAH
HHCCCCCCCCCCCHHHHEECCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHC
GVTEDEGPLWYFRQAGALNESMSDVFGSLVRQMKLKQKADAADWLIGKELLTGNVEGVAL
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEE
RSMKNPGTAFDDDVLGKDPQPGHMKDYVHTWEDNGGGHINSGIPNRAFYLVASHLGGYAW
ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHCCHHH
ERAGRIWYDAIRDSHIKPDMGFLDFARITVMSATRLFGAGEEEDAVREAWEQVGIRVARS
HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
GVRMPAFVGAVTQPSPQAGRAPRA
CCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFHPTRHRHSIHCILPPYLARSIAENGTSEQRERVLRTLSTDSTFRALRLAGSRTTPSTL
CCCCCCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
VTRPRAMMVESALHRTIYDLRNSEAFPGTPVRFEGQEATDDIAVTEAYDGLGDTYNFFWE
HHCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEHHHCCCCHHHHHHHH
IFGRSSIDGDGMPLQAFVHYGNTYDNAFWDGRRMVFGDGDGDLFNRFTICLDIIAHELAH
HHCCCCCCCCCCCHHHHEECCCCCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHC
GVTEDEGPLWYFRQAGALNESMSDVFGSLVRQMKLKQKADAADWLIGKELLTGNVEGVAL
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEE
RSMKNPGTAFDDDVLGKDPQPGHMKDYVHTWEDNGGGHINSGIPNRAFYLVASHLGGYAW
ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHCCHHH
ERAGRIWYDAIRDSHIKPDMGFLDFARITVMSATRLFGAGEEEDAVREAWEQVGIRVARS
HHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
GVRMPAFVGAVTQPSPQAGRAPRA
CCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1917878 [H]