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The map label for this gene is yggB [C]

Identifier: 108763193

GI number: 108763193

Start: 7049668

End: 7051326

Strand: Reverse

Name: yggB [C]

Synonym: MXAN_5687

Alternate gene names: 108763193

Gene position: 7051326-7049668 (Counterclockwise)

Preceding gene: 108760023

Following gene: 108761958

Centisome position: 77.15

GC content: 69.44

Gene sequence:

>1659_bases
ATGATGCACCGTGACAGATGGACCCTGAGGGCACTCGTCCTGGGACTGGGGCTGCTGTGGAGCCTTCCTGCCGCCGCGCT
CAACGCGGGTCTCAACCCGCCGCCCTCCTCGGTGGACCGGAAGACGCCGCAGGCCACCGTGCAGGGCTTTCTGGCCGCCG
CGCACCGGGGGGACTACGCCCTGGCGGCGCACTACCTGGACCTGGACTACATCCCCCGCGCCCAGCAGGCGGAGCGGGGC
TTCCAGTTGGCCCGCGCGCTCAAGTTCGTGCTGGACCGCAAGCTGCCCGTGGACGTGGGCTCGCTGAGCAAGGAGCCGGA
GGGCGACCCGGCCGACGCGCGCTACGACCAGTTGGGCACCATTCCGTTGCAGGGGAACAACGTCCCCGTCCGCGTCCAGC
GTGTCTCCTCTGCTGAGGGGGAGATGGTCTGGGTCTTCAGCGAGTCCACGGTGCGGCAGGTGGACCCGCTCTTCGCGGAG
TATGGCCCCCGGCTGGTGGGCCTCCTGCCGGCCTTCTTCTTCAGTGACACGGTGCTGGGACTGGAGCCCTGGCAGTGGCT
GGGGCTGCTGGTGACGGTGCTGGGCAGCCTGGGCCTGGCGGTGCTGCTGGAGCGCCTGGTCCTGGCCTTCGCCCGCCGTG
TGGCGCGGTGGACCCGGTTCACCTGGGAGGAGAATGTGGTCTCCTCGGGGAAGGGGCCGCTGAAGCTGCTCACCTTCTCC
GCGCTGCTGGTGGTGGGCACGCTGCTCTTGCGGCTGCCTCGTCCGGCGCAGGGCGTGTTCATCCGGATCGGCTACTCGTT
GAGCGTCGTGGCGCTGGCTTGGGCCGTGCTGCGCATCCTCCACGTCTCCGTCGCCTTCGTGCAGAGCCGCGTGTCGTCGG
AGATGAAGGACGCGGCACGGGCGCGCAGCGTGAGCACGCAGTTGGTGGTGCTCCGCGCCATCTTCGAGGTGGCCACGTAC
GTCATCGCCGCGGCGCTGCTGCTCATCCAGTTCGAGGTGGTGCGCAACGTCGGAGTGTCACTGCTGGCCTCTGCCGGTAT
TGCCGGCCTGGTGCTCGGTCTCGCGGCGCAGAAGTCCATTGGTACGCTGCTGGCCGGCATCCAGCTCTCCATCACCCAGC
CCATCAGCATTGGCGACACCCTCATCACCGAGGGCGAGTGGGGCACGGTGGAGAAAATCACGCTCACCTACGTGGTGCTG
CGGACGTGGGACCAGCGCCGGCTGGTCATCCCCATTGTCCAGTTCCTGGACAAGCCCTTCCAGAACTGGAGCAAGGGGAA
CCCGGAGATGCTGGGGCCCGTCATCCTCCAGGTGGACTTCCAGACAGACATCGACGCGCTGCGCGCGGAGCTGCGCCGCA
TCCTGGAGAACGAGGGCAAGGCCCTGTGGGACGGCCGCGTGGCGACGGTGGTCGTCCTGGACGTGCTGGACCGCACCCTC
ACGGTGCGCGCGCTGGTCAGCGTGTCGGACTTCAGCAAGCTCTTCGACCTGCGGGCCCTGGTGCGCGAGAAGCTGGTCGC
CTTCCTTCGCGCCCACCCGCTGTGGCTGCCCGTCACCCGCACGGAGGCGCGTCCCTTCCCGCCGCCCGAGCTGGATCCGG
CGCGGCTGTCCACTTCCCCGGACTCGCCGCCCGCGCCGCCCACGCCGCCTCGGGTGTGA

Upstream 100 bases:

>100_bases
ATTTCGGAAGTCCACCGCCGCACGCTCGCCCGCCGGGTCTCCGGGGACGACTTCTTTCCAGTGAGACATCCGAAAAGGGA
TAGGGATATGGAAGTCAGCC

Downstream 100 bases:

>100_bases
AGGCGGGCTGCCCCCCAGACGCAGTGAGCCCTTGCCTGGGGGCATGGGGTTTTGAATAGTCGGCGCGCCGCGCCGTCATA
GCGCTGGAAATTCGCACCTA

Product: mechanosensitive ion channel family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MMHRDRWTLRALVLGLGLLWSLPAAALNAGLNPPPSSVDRKTPQATVQGFLAAAHRGDYALAAHYLDLDYIPRAQQAERG
FQLARALKFVLDRKLPVDVGSLSKEPEGDPADARYDQLGTIPLQGNNVPVRVQRVSSAEGEMVWVFSESTVRQVDPLFAE
YGPRLVGLLPAFFFSDTVLGLEPWQWLGLLVTVLGSLGLAVLLERLVLAFARRVARWTRFTWEENVVSSGKGPLKLLTFS
ALLVVGTLLLRLPRPAQGVFIRIGYSLSVVALAWAVLRILHVSVAFVQSRVSSEMKDAARARSVSTQLVVLRAIFEVATY
VIAAALLLIQFEVVRNVGVSLLASAGIAGLVLGLAAQKSIGTLLAGIQLSITQPISIGDTLITEGEWGTVEKITLTYVVL
RTWDQRRLVIPIVQFLDKPFQNWSKGNPEMLGPVILQVDFQTDIDALRAELRRILENEGKALWDGRVATVVVLDVLDRTL
TVRALVSVSDFSKLFDLRALVREKLVAFLRAHPLWLPVTRTEARPFPPPELDPARLSTSPDSPPAPPTPPRV

Sequences:

>Translated_552_residues
MMHRDRWTLRALVLGLGLLWSLPAAALNAGLNPPPSSVDRKTPQATVQGFLAAAHRGDYALAAHYLDLDYIPRAQQAERG
FQLARALKFVLDRKLPVDVGSLSKEPEGDPADARYDQLGTIPLQGNNVPVRVQRVSSAEGEMVWVFSESTVRQVDPLFAE
YGPRLVGLLPAFFFSDTVLGLEPWQWLGLLVTVLGSLGLAVLLERLVLAFARRVARWTRFTWEENVVSSGKGPLKLLTFS
ALLVVGTLLLRLPRPAQGVFIRIGYSLSVVALAWAVLRILHVSVAFVQSRVSSEMKDAARARSVSTQLVVLRAIFEVATY
VIAAALLLIQFEVVRNVGVSLLASAGIAGLVLGLAAQKSIGTLLAGIQLSITQPISIGDTLITEGEWGTVEKITLTYVVL
RTWDQRRLVIPIVQFLDKPFQNWSKGNPEMLGPVILQVDFQTDIDALRAELRRILENEGKALWDGRVATVVVLDVLDRTL
TVRALVSVSDFSKLFDLRALVREKLVAFLRAHPLWLPVTRTEARPFPPPELDPARLSTSPDSPPAPPTPPRV
>Mature_552_residues
MMHRDRWTLRALVLGLGLLWSLPAAALNAGLNPPPSSVDRKTPQATVQGFLAAAHRGDYALAAHYLDLDYIPRAQQAERG
FQLARALKFVLDRKLPVDVGSLSKEPEGDPADARYDQLGTIPLQGNNVPVRVQRVSSAEGEMVWVFSESTVRQVDPLFAE
YGPRLVGLLPAFFFSDTVLGLEPWQWLGLLVTVLGSLGLAVLLERLVLAFARRVARWTRFTWEENVVSSGKGPLKLLTFS
ALLVVGTLLLRLPRPAQGVFIRIGYSLSVVALAWAVLRILHVSVAFVQSRVSSEMKDAARARSVSTQLVVLRAIFEVATY
VIAAALLLIQFEVVRNVGVSLLASAGIAGLVLGLAAQKSIGTLLAGIQLSITQPISIGDTLITEGEWGTVEKITLTYVVL
RTWDQRRLVIPIVQFLDKPFQNWSKGNPEMLGPVILQVDFQTDIDALRAELRRILENEGKALWDGRVATVVVLDVLDRTL
TVRALVSVSDFSKLFDLRALVREKLVAFLRAHPLWLPVTRTEARPFPPPELDPARLSTSPDSPPAPPTPPRV

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014
- InterPro:   IPR008910 [H]

Pfam domain/function: PF00924 MS_channel; PF05552 TM_helix [H]

EC number: NA

Molecular weight: Translated: 60646; Mature: 60646

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHRDRWTLRALVLGLGLLWSLPAAALNAGLNPPPSSVDRKTPQATVQGFLAAAHRGDYA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE
LAAHYLDLDYIPRAQQAERGFQLARALKFVLDRKLPVDVGSLSKEPEGDPADARYDQLGT
EHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
IPLQGNNVPVRVQRVSSAEGEMVWVFSESTVRQVDPLFAEYGPRLVGLLPAFFFSDTVLG
EEECCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
LEPWQWLGLLVTVLGSLGLAVLLERLVLAFARRVARWTRFTWEENVVSSGKGPLKLLTFS
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHH
ALLVVGTLLLRLPRPAQGVFIRIGYSLSVVALAWAVLRILHVSVAFVQSRVSSEMKDAAR
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSVSTQLVVLRAIFEVATYVIAAALLLIQFEVVRNVGVSLLASAGIAGLVLGLAAQKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GTLLAGIQLSITQPISIGDTLITEGEWGTVEKITLTYVVLRTWDQRRLVIPIVQFLDKPF
HHHHHCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH
QNWSKGNPEMLGPVILQVDFQTDIDALRAELRRILENEGKALWDGRVATVVVLDVLDRTL
HHHCCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH
TVRALVSVSDFSKLFDLRALVREKLVAFLRAHPLWLPVTRTEARPFPPPELDPARLSTSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
DSPPAPPTPPRV
CCCCCCCCCCCC
>Mature Secondary Structure
MMHRDRWTLRALVLGLGLLWSLPAAALNAGLNPPPSSVDRKTPQATVQGFLAAAHRGDYA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE
LAAHYLDLDYIPRAQQAERGFQLARALKFVLDRKLPVDVGSLSKEPEGDPADARYDQLGT
EHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
IPLQGNNVPVRVQRVSSAEGEMVWVFSESTVRQVDPLFAEYGPRLVGLLPAFFFSDTVLG
EEECCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
LEPWQWLGLLVTVLGSLGLAVLLERLVLAFARRVARWTRFTWEENVVSSGKGPLKLLTFS
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHH
ALLVVGTLLLRLPRPAQGVFIRIGYSLSVVALAWAVLRILHVSVAFVQSRVSSEMKDAAR
HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARSVSTQLVVLRAIFEVATYVIAAALLLIQFEVVRNVGVSLLASAGIAGLVLGLAAQKSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GTLLAGIQLSITQPISIGDTLITEGEWGTVEKITLTYVVLRTWDQRRLVIPIVQFLDKPF
HHHHHCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH
QNWSKGNPEMLGPVILQVDFQTDIDALRAELRRILENEGKALWDGRVATVVVLDVLDRTL
HHHCCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHH
TVRALVSVSDFSKLFDLRALVREKLVAFLRAHPLWLPVTRTEARPFPPPELDPARLSTSP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
DSPPAPPTPPRV
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]