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The map label for this gene is arpC [H]

Identifier: 108763186

GI number: 108763186

Start: 2116446

End: 2117945

Strand: Direct

Name: arpC [H]

Synonym: MXAN_1791

Alternate gene names: 108763186

Gene position: 2116446-2117945 (Clockwise)

Preceding gene: 108758592

Following gene: 108763742

Centisome position: 23.16

GC content: 67.2

Gene sequence:

>1500_bases
ATGAGACTTCGATTGACGCTCGCCCTCCTCGCGATGACCTGCTCCGGTTGCGAGCTGATCCGTCCCGTCGTCGTCAAACC
GCCTCCGACGCCGAGCAGCTACTCGACCGCCAGCGAACTGCGCACCGAGCCGGCCCAACCATCCAGCGCACCCGAGGGCG
GGGTTCCAAGCCCTCGGCCGTCGAAGGAGGGCGTGCCCGCGCAGCCAGCCGAGCGCGTCACCCAGGACGCGGTCTGGTGG
ACGGCGTTCGCCGATCCGGCTCTCGACACGGCCATCCAAGAGTGCTTCGGCGACAACCTGGTCCTGCGCGAGGTGCGGGA
GCTGATCTACGAGAACCAGCTCGACCCCAACGTGCCGCAAGGTTGGTGGTACCCGCTCCAGGTCGGCATCCTGAACCCTG
CGGGGCTGAGTCATGTCGTTGCCAACGCCAACCTTCCGCCCGCGCCGCCAACCCGGGCCGAGTACAACGTCGCCACCGTC
GGTTTCGGCGTGACCTACCAGGTCGACCTGTTTGGAGCCCTCGGTGCGCAGCGGCGCGCGGGATTGAACTTCGCCGAGCA
GCAGCGGCAGCTCACCGAGGGCCGCGTCCAGGACCTCGCGGTGCGGATCACCCAGGTCTGGTTCGACATCCTCGAGGCCC
GCGCGCTCCGGGACCTCACGCTGCGGCAGATCGACTACAACAAGAAACTGCTCCGGCTGATTCGAGCGCGGTTCGAGCAG
CACCTCACGCCCCGGCTCGTGGTGCTGCAGCAGGAGCAGTTGCTGGTGAACCTCGAATCGCAGGTGCCGCTGATCGCCAC
CCGGAACGCGCTCTTGAATTCGGAGCTGAAGGCGCTGCTGGGCCGGGTACCAACCCCCGCCGACGACGTCATTCCACTCG
ATCGACAGCTTCCCGATCTCCCGCCCCCACCGAAACTCGGAACGCCGGGCGACCTGAACGTGAACACGCCCGAGATGCGG
CTCGCGGAGCTTCGCGTCGCCGAGGTCGAGCACCGCATCAACGCGAACCTGGCGAGCTGGCTTCCGACGATCCAACTGGT
GGGCAACGTGGGCGCTTTGAAGGTCGGCCTCTCGGAGCCGGCCCTGGCCGAGTCCGTCGTCGGGGTGAACCTGACCTGGG
CCCTGTTCGATGGAAGGCGCGTCACCGAGTACATGCGACTGCCGATCCAGCTCCAGCGTCGCGAAATCCAATACCAGCTC
GCGCTGCACACCGCGATCGGACGGGTGCAGGATGCCGTGGTTCGGGAGGAGAACGAGGCGACGAGCCTGCGCAGCCTGCG
TGCGCAGGTCCAGCTCGGGCAGCAGCTCCTGGACGAGGCGAGGCGGCTCTTCGAGCAGGGGCATTCGGACTATCTGACGG
TGCTCACCGCCCTGACGAATCTGGTCGGGCTTGAGCGCGCAAGTCTGCAAGCGCAACGGCTGCTGCTCAACCATCGCGTC
GAGGTCTATCGCTCGCTCGGCGGCACCTGGTCGCGCGACGTCACACTGAAGCGGGAGTGA

Upstream 100 bases:

>100_bases
TCCTCGACGAGAGCTTCGCCTCCCTCGATCCCGAGACCATGCGGGTCGCGCAGCGCTGCGTCCTCAACCACGCGAAAGCC
CTCGTGGTCGTCAGCCACCC

Downstream 100 bases:

>100_bases
GAAGCCATGGCACAGCTGCAAGCGGATGAGATGCTCTACATTCCCAATCGAAGGCGGCTCACGCACGACCGGCTCGACGC
GGGAAATGGCCAGCAGGTCC

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MRLRLTLALLAMTCSGCELIRPVVVKPPPTPSSYSTASELRTEPAQPSSAPEGGVPSPRPSKEGVPAQPAERVTQDAVWW
TAFADPALDTAIQECFGDNLVLREVRELIYENQLDPNVPQGWWYPLQVGILNPAGLSHVVANANLPPAPPTRAEYNVATV
GFGVTYQVDLFGALGAQRRAGLNFAEQQRQLTEGRVQDLAVRITQVWFDILEARALRDLTLRQIDYNKKLLRLIRARFEQ
HLTPRLVVLQQEQLLVNLESQVPLIATRNALLNSELKALLGRVPTPADDVIPLDRQLPDLPPPPKLGTPGDLNVNTPEMR
LAELRVAEVEHRINANLASWLPTIQLVGNVGALKVGLSEPALAESVVGVNLTWALFDGRRVTEYMRLPIQLQRREIQYQL
ALHTAIGRVQDAVVREENEATSLRSLRAQVQLGQQLLDEARRLFEQGHSDYLTVLTALTNLVGLERASLQAQRLLLNHRV
EVYRSLGGTWSRDVTLKRE

Sequences:

>Translated_499_residues
MRLRLTLALLAMTCSGCELIRPVVVKPPPTPSSYSTASELRTEPAQPSSAPEGGVPSPRPSKEGVPAQPAERVTQDAVWW
TAFADPALDTAIQECFGDNLVLREVRELIYENQLDPNVPQGWWYPLQVGILNPAGLSHVVANANLPPAPPTRAEYNVATV
GFGVTYQVDLFGALGAQRRAGLNFAEQQRQLTEGRVQDLAVRITQVWFDILEARALRDLTLRQIDYNKKLLRLIRARFEQ
HLTPRLVVLQQEQLLVNLESQVPLIATRNALLNSELKALLGRVPTPADDVIPLDRQLPDLPPPPKLGTPGDLNVNTPEMR
LAELRVAEVEHRINANLASWLPTIQLVGNVGALKVGLSEPALAESVVGVNLTWALFDGRRVTEYMRLPIQLQRREIQYQL
ALHTAIGRVQDAVVREENEATSLRSLRAQVQLGQQLLDEARRLFEQGHSDYLTVLTALTNLVGLERASLQAQRLLLNHRV
EVYRSLGGTWSRDVTLKRE
>Mature_499_residues
MRLRLTLALLAMTCSGCELIRPVVVKPPPTPSSYSTASELRTEPAQPSSAPEGGVPSPRPSKEGVPAQPAERVTQDAVWW
TAFADPALDTAIQECFGDNLVLREVRELIYENQLDPNVPQGWWYPLQVGILNPAGLSHVVANANLPPAPPTRAEYNVATV
GFGVTYQVDLFGALGAQRRAGLNFAEQQRQLTEGRVQDLAVRITQVWFDILEARALRDLTLRQIDYNKKLLRLIRARFEQ
HLTPRLVVLQQEQLLVNLESQVPLIATRNALLNSELKALLGRVPTPADDVIPLDRQLPDLPPPPKLGTPGDLNVNTPEMR
LAELRVAEVEHRINANLASWLPTIQLVGNVGALKVGLSEPALAESVVGVNLTWALFDGRRVTEYMRLPIQLQRREIQYQL
ALHTAIGRVQDAVVREENEATSLRSLRAQVQLGQQLLDEARRLFEQGHSDYLTVLTALTNLVGLERASLQAQRLLLNHRV
EVYRSLGGTWSRDVTLKRE

Specific function: The outer membrane component of an antibiotic efflux pump. Confers resistance to numerous structurally unrelated antibiotics such as carbenicillin, chloramphenicol, erythromycin, novobiocin, streptomycin and tetracycline. Is not involved in organic solven

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 55514; Mature: 55514

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRLTLALLAMTCSGCELIRPVVVKPPPTPSSYSTASELRTEPAQPSSAPEGGVPSPRP
CEEEHHHHHHHHHHCCCHHHCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
SKEGVPAQPAERVTQDAVWWTAFADPALDTAIQECFGDNLVLREVRELIYENQLDPNVPQ
CCCCCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
GWWYPLQVGILNPAGLSHVVANANLPPAPPTRAEYNVATVGFGVTYQVDLFGALGAQRRA
CCEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHCCHHHC
GLNFAEQQRQLTEGRVQDLAVRITQVWFDILEARALRDLTLRQIDYNKKLLRLIRARFEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HLTPRLVVLQQEQLLVNLESQVPLIATRNALLNSELKALLGRVPTPADDVIPLDRQLPDL
CCCCEEEEEEHHHHHEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCC
PPPPKLGTPGDLNVNTPEMRLAELRVAEVEHRINANLASWLPTIQLVGNVGALKVGLSEP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCC
ALAESVVGVNLTWALFDGRRVTEYMRLPIQLQRREIQYQLALHTAIGRVQDAVVREENEA
HHHHHHHCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TSLRSLRAQVQLGQQLLDEARRLFEQGHSDYLTVLTALTNLVGLERASLQAQRLLLNHRV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVYRSLGGTWSRDVTLKRE
HHHHHHCCCCCCCEEEECC
>Mature Secondary Structure
MRLRLTLALLAMTCSGCELIRPVVVKPPPTPSSYSTASELRTEPAQPSSAPEGGVPSPRP
CEEEHHHHHHHHHHCCCHHHCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
SKEGVPAQPAERVTQDAVWWTAFADPALDTAIQECFGDNLVLREVRELIYENQLDPNVPQ
CCCCCCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
GWWYPLQVGILNPAGLSHVVANANLPPAPPTRAEYNVATVGFGVTYQVDLFGALGAQRRA
CCEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEEHHHHHCCHHHC
GLNFAEQQRQLTEGRVQDLAVRITQVWFDILEARALRDLTLRQIDYNKKLLRLIRARFEQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
HLTPRLVVLQQEQLLVNLESQVPLIATRNALLNSELKALLGRVPTPADDVIPLDRQLPDL
CCCCEEEEEEHHHHHEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCC
PPPPKLGTPGDLNVNTPEMRLAELRVAEVEHRINANLASWLPTIQLVGNVGALKVGLSEP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCC
ALAESVVGVNLTWALFDGRRVTEYMRLPIQLQRREIQYQLALHTAIGRVQDAVVREENEA
HHHHHHHCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TSLRSLRAQVQLGQQLLDEARRLFEQGHSDYLTVLTALTNLVGLERASLQAQRLLLNHRV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVYRSLGGTWSRDVTLKRE
HHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11160799 [H]