| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is macB [H]
Identifier: 108763121
GI number: 108763121
Start: 4489837
End: 4492257
Strand: Direct
Name: macB [H]
Synonym: MXAN_3773
Alternate gene names: 108763121
Gene position: 4489837-4492257 (Clockwise)
Preceding gene: 108760417
Following gene: 108763670
Centisome position: 49.12
GC content: 71.95
Gene sequence:
>2421_bases ATGACCTTCTTCGATTCGCTCGCCGCGGATGTTCGCTTCGCGCTCCGCACCTTCCGCCGCTCACCCGGCTTCGTCGCCGC CGCCGTGATGTGCCTGGCGCTGGGTATTGGCGCCAACGCCGTCATCTTCAGCGTGGTTCACGGGGTCCTCCTCCGGCCGC TGCCGTACGCGGAACCCGAGCGGCTGGTTAGTCTCGTCGAGGTGCGCCCCCAGGGCTATGGCGGCCCGGTGTCCTGGCCC ACGTTCTGGGCCTGGCGCCAACACAGCCCGGCCTTCGAACAGATGGCGGCATTCACAGGCGGCGGCGTCACCCTCCAGGC CCAGGATGCGCCTGAACGCCTCCAGGCTCTTCGCGGGACGGCTGACTTCTTCACGGTTCATGGCGTGCCGCCCTTGCTGG GCCGGACTTTCGCGCTCGACGAGGACCTGCCCGGCCAGGCCCCGGTCGCGGTCCTCAGCGAGCGCCTCTGGCGCGCCCGT TTTGGCGCCGACCCAGCCGTCCTCGGCCGTTCCGTGAGCCTGGATGGCCTGGCCCACACCGTCATTGGCGTGATGCCCGC GTCTTTCGATGCGTCCACCGACGTGTGGCTGCCCCTGGTGGCTCCGCCGGACGCCGCCGCTCGGACCCGGTCCACGGTGC TGACCCTCCGGGCCCGGCTGGCGCCAGGCGTTTCGCTGGCCTCCGCCGAGGCCCAGTTGAAGCAAGTCGCCGCGAACTCC GCGGCGGCCCAGGCGGAATCCCACCGGGACCGGAGCGCCCGGGTCATTCCGCTCGATGAAAGCCAGACGCAGTCCTGGCG GGCGCCGCTCCAGGTCCTGCTGGGCGCCGTCGCCCTGGTGCTCCTCATCGCGTGTACGAACGTCGCGAATCTGCTGCTGG CCCGCGCGGGCACCCGGCGGCGCGAGCTGGCCGTTCGTCTGGCCCTGGGCGCCAGCCGGGCCCGGGTCGTCCAGCAGCTC CTGGTCGAAAGCCTCCTGCTGGCGTTCCTGGGCGGCGTGCTGGCGGCCTTGCTGGCGCGTTGGGGCCTGGACGCGCTGCT CGCCCTGGCGCCGGAGAGCCTGCCCCGGCGCCAGGACATCGTGTTGGACGGAACGGCCTTCCTGTTCCTCCTCGCAATCA CCAGCGTCAGCGGCCTGGCCTTCGGGCTGCTTCCGGCCCTCCAGGTCTCCCGGCTGGACGTCCGTGGTGGGCTCGCCGCC GCGGGCGATGGCAGCACGGTGCCGGGTTTCGGCCGTCGCCTGGGGGCCTCGCTGGTGGTTGTGGAGATCGCCCTATCGCT GGTGCTGCTCGTCGGCGCGGGCCTGCTCGGACGCGGCTTTCTGCACCTGCTGGGGACTTCCACCGGACTTGCCCCTGGCC AGGTCCTCACGCTGCACCTGTCCATCCCAGACGACCGGTTCTTCAAGGATGGCGCCCTGGACGCGGAGCTGCCGGGACGG CTCTTGGAGCCGGTGCTGGAGGCGGTTCGCGCGCTCCCGGGCGTCACCGCGGCGGGCATGACGTCCGTGCTCCCCATCCA ACGGGCCTGGAACAACGCTCGGTATCAGCTCGAAGGAGCGCCTCTGCCAGAGCCCGGCGACGAACCTCGCGCCGAGCGCC GCGCCTCCAGTCCGGGCTACTTCGCCGCCATGGGCATCCCCCTTCGCCAGGGGCGCGATTTCACGTCCCTGGACGCCGCG CCGGACCAGCCCGGCGTCGTCATCGTCAATGAAACCCTGGCCCGCCGGCACTTTCCGGCAGGAGGTGCCCTGGGCCACCA GCTGCGCATCGGGGCGACGCCGTACACCATCGTCGGCGTCGTGGGCGATGTCCGCCAGGCGGGACTGGAGCGCGAACCGC TCGCCGAGTTCCACGTCCCCCATGGCAGGCCCTGGGGCGATGACGGGCTCGTCCTGGTCACGCGCACCTCGGTGCAGCCG GAGACGCTGCTGCCGGCCATCCAGGAGGCCATCCGCCGCGTGGATGGCACCGTGCCCGTCTACCGGGCGCTCACCCTGGA ACAGGTCATCTCGCAATCCCTGGCGATGCGCAGACTCGTCCTGGGGCTGCTCGGCGGTTTTGCGGTCCTCGCCGTCCTGC TCGCCGCCTACGGCCTCTACGGGGTCATCTCGCTCCGGGTCGTCCAGCGCACGCGGGAGCTGGGCGTCCGGATGGCGCTC GGTGCCCGGCCCGCGGACGTGCTCCGGCTCGTCCTGGGCCAGGGCGCGGGCATGACAGCCGTGGGCCTCGGGGTGGGACT TGGGGCCGCGTGGGCCCTGTCCCAGGTACTCGCAAGCCAGCTTCACGGCGTCAGCGCGCGGGATCCGTGGACGTTCGGGG CCGTGGCGGCGCTGCTGGCGGCCGTGGCGTTGCTCGCCTGTTGGATTCCGGCCCGGCGGGCGATACGGATGGACCCGCTT CAGGCGCTCCGGAAGGAATGA
Upstream 100 bases:
>100_bases TTCAGGCCGTTCCCCGCCCTGGTTTCTGGGCCGTCCGGGCCGGTTTCGGGTCCGTCGATTGCAGTCGAATCCGGCAAGAT CTCCACTCCCGACGCCCGCC
Downstream 100 bases:
>100_bases CGTCGGGACTTCCGCGTCCCATGCGCGGGATGCGGAATCCCAGTCATGGAACGCCGCCGGATGACACGTCGCGTTGACGG GAAATCCAGACGCGAATGCG
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 806; Mature: 805
Protein sequence:
>806_residues MTFFDSLAADVRFALRTFRRSPGFVAAAVMCLALGIGANAVIFSVVHGVLLRPLPYAEPERLVSLVEVRPQGYGGPVSWP TFWAWRQHSPAFEQMAAFTGGGVTLQAQDAPERLQALRGTADFFTVHGVPPLLGRTFALDEDLPGQAPVAVLSERLWRAR FGADPAVLGRSVSLDGLAHTVIGVMPASFDASTDVWLPLVAPPDAAARTRSTVLTLRARLAPGVSLASAEAQLKQVAANS AAAQAESHRDRSARVIPLDESQTQSWRAPLQVLLGAVALVLLIACTNVANLLLARAGTRRRELAVRLALGASRARVVQQL LVESLLLAFLGGVLAALLARWGLDALLALAPESLPRRQDIVLDGTAFLFLLAITSVSGLAFGLLPALQVSRLDVRGGLAA AGDGSTVPGFGRRLGASLVVVEIALSLVLLVGAGLLGRGFLHLLGTSTGLAPGQVLTLHLSIPDDRFFKDGALDAELPGR LLEPVLEAVRALPGVTAAGMTSVLPIQRAWNNARYQLEGAPLPEPGDEPRAERRASSPGYFAAMGIPLRQGRDFTSLDAA PDQPGVVIVNETLARRHFPAGGALGHQLRIGATPYTIVGVVGDVRQAGLEREPLAEFHVPHGRPWGDDGLVLVTRTSVQP ETLLPAIQEAIRRVDGTVPVYRALTLEQVISQSLAMRRLVLGLLGGFAVLAVLLAAYGLYGVISLRVVQRTRELGVRMAL GARPADVLRLVLGQGAGMTAVGLGVGLGAAWALSQVLASQLHGVSARDPWTFGAVAALLAAVALLACWIPARRAIRMDPL QALRKE
Sequences:
>Translated_806_residues MTFFDSLAADVRFALRTFRRSPGFVAAAVMCLALGIGANAVIFSVVHGVLLRPLPYAEPERLVSLVEVRPQGYGGPVSWP TFWAWRQHSPAFEQMAAFTGGGVTLQAQDAPERLQALRGTADFFTVHGVPPLLGRTFALDEDLPGQAPVAVLSERLWRAR FGADPAVLGRSVSLDGLAHTVIGVMPASFDASTDVWLPLVAPPDAAARTRSTVLTLRARLAPGVSLASAEAQLKQVAANS AAAQAESHRDRSARVIPLDESQTQSWRAPLQVLLGAVALVLLIACTNVANLLLARAGTRRRELAVRLALGASRARVVQQL LVESLLLAFLGGVLAALLARWGLDALLALAPESLPRRQDIVLDGTAFLFLLAITSVSGLAFGLLPALQVSRLDVRGGLAA AGDGSTVPGFGRRLGASLVVVEIALSLVLLVGAGLLGRGFLHLLGTSTGLAPGQVLTLHLSIPDDRFFKDGALDAELPGR LLEPVLEAVRALPGVTAAGMTSVLPIQRAWNNARYQLEGAPLPEPGDEPRAERRASSPGYFAAMGIPLRQGRDFTSLDAA PDQPGVVIVNETLARRHFPAGGALGHQLRIGATPYTIVGVVGDVRQAGLEREPLAEFHVPHGRPWGDDGLVLVTRTSVQP ETLLPAIQEAIRRVDGTVPVYRALTLEQVISQSLAMRRLVLGLLGGFAVLAVLLAAYGLYGVISLRVVQRTRELGVRMAL GARPADVLRLVLGQGAGMTAVGLGVGLGAAWALSQVLASQLHGVSARDPWTFGAVAALLAAVALLACWIPARRAIRMDPL QALRKE >Mature_805_residues TFFDSLAADVRFALRTFRRSPGFVAAAVMCLALGIGANAVIFSVVHGVLLRPLPYAEPERLVSLVEVRPQGYGGPVSWPT FWAWRQHSPAFEQMAAFTGGGVTLQAQDAPERLQALRGTADFFTVHGVPPLLGRTFALDEDLPGQAPVAVLSERLWRARF GADPAVLGRSVSLDGLAHTVIGVMPASFDASTDVWLPLVAPPDAAARTRSTVLTLRARLAPGVSLASAEAQLKQVAANSA AAQAESHRDRSARVIPLDESQTQSWRAPLQVLLGAVALVLLIACTNVANLLLARAGTRRRELAVRLALGASRARVVQQLL VESLLLAFLGGVLAALLARWGLDALLALAPESLPRRQDIVLDGTAFLFLLAITSVSGLAFGLLPALQVSRLDVRGGLAAA GDGSTVPGFGRRLGASLVVVEIALSLVLLVGAGLLGRGFLHLLGTSTGLAPGQVLTLHLSIPDDRFFKDGALDAELPGRL LEPVLEAVRALPGVTAAGMTSVLPIQRAWNNARYQLEGAPLPEPGDEPRAERRASSPGYFAAMGIPLRQGRDFTSLDAAP DQPGVVIVNETLARRHFPAGGALGHQLRIGATPYTIVGVVGDVRQAGLEREPLAEFHVPHGRPWGDDGLVLVTRTSVQPE TLLPAIQEAIRRVDGTVPVYRALTLEQVISQSLAMRRLVLGLLGGFAVLAVLLAAYGLYGVISLRVVQRTRELGVRMALG ARPADVLRLVLGQGAGMTAVGLGVGLGAAWALSQVLASQLHGVSARDPWTFGAVAALLAAVALLACWIPARRAIRMDPLQ ALRKE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=280, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 85068; Mature: 84937
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFFDSLAADVRFALRTFRRSPGFVAAAVMCLALGIGANAVIFSVVHGVLLRPLPYAEPE CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH RLVSLVEVRPQGYGGPVSWPTFWAWRQHSPAFEQMAAFTGGGVTLQAQDAPERLQALRGT HHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCC ADFFTVHGVPPLLGRTFALDEDLPGQAPVAVLSERLWRARFGADPAVLGRSVSLDGLAHT CCEEEECCCCHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHH VIGVMPASFDASTDVWLPLVAPPDAAARTRSTVLTLRARLAPGVSLASAEAQLKQVAANS HHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAAQAESHRDRSARVIPLDESQTQSWRAPLQVLLGAVALVLLIACTNVANLLLARAGTRR HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RELAVRLALGASRARVVQQLLVESLLLAFLGGVLAALLARWGLDALLALAPESLPRRQDI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCE VLDGTAFLFLLAITSVSGLAFGLLPALQVSRLDVRGGLAAAGDGSTVPGFGRRLGASLVV EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHH VEIALSLVLLVGAGLLGRGFLHLLGTSTGLAPGQVLTLHLSIPDDRFFKDGALDAELPGR HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH LLEPVLEAVRALPGVTAAGMTSVLPIQRAWNNARYQLEGAPLPEPGDEPRAERRASSPGY HHHHHHHHHHHCCCCCHHCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCCE FAAMGIPLRQGRDFTSLDAAPDQPGVVIVNETLARRHFPAGGALGHQLRIGATPYTIVGV EEEECCCHHCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCCEEEECCCCEEEHHH VGDVRQAGLEREPLAEFHVPHGRPWGDDGLVLVTRTSVQPETLLPAIQEAIRRVDGTVPV HHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHH YRALTLEQVISQSLAMRRLVLGLLGGFAVLAVLLAAYGLYGVISLRVVQRTRELGVRMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC GARPADVLRLVLGQGAGMTAVGLGVGLGAAWALSQVLASQLHGVSARDPWTFGAVAALLA CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AVALLACWIPARRAIRMDPLQALRKE HHHHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure TFFDSLAADVRFALRTFRRSPGFVAAAVMCLALGIGANAVIFSVVHGVLLRPLPYAEPE CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHH RLVSLVEVRPQGYGGPVSWPTFWAWRQHSPAFEQMAAFTGGGVTLQAQDAPERLQALRGT HHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCC ADFFTVHGVPPLLGRTFALDEDLPGQAPVAVLSERLWRARFGADPAVLGRSVSLDGLAHT CCEEEECCCCHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHH VIGVMPASFDASTDVWLPLVAPPDAAARTRSTVLTLRARLAPGVSLASAEAQLKQVAANS HHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AAAQAESHRDRSARVIPLDESQTQSWRAPLQVLLGAVALVLLIACTNVANLLLARAGTRR HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RELAVRLALGASRARVVQQLLVESLLLAFLGGVLAALLARWGLDALLALAPESLPRRQDI HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCE VLDGTAFLFLLAITSVSGLAFGLLPALQVSRLDVRGGLAAAGDGSTVPGFGRRLGASLVV EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHH VEIALSLVLLVGAGLLGRGFLHLLGTSTGLAPGQVLTLHLSIPDDRFFKDGALDAELPGR HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH LLEPVLEAVRALPGVTAAGMTSVLPIQRAWNNARYQLEGAPLPEPGDEPRAERRASSPGY HHHHHHHHHHHCCCCCHHCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHCCCCCCE FAAMGIPLRQGRDFTSLDAAPDQPGVVIVNETLARRHFPAGGALGHQLRIGATPYTIVGV EEEECCCHHCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCCCCEEEECCCCEEEHHH VGDVRQAGLEREPLAEFHVPHGRPWGDDGLVLVTRTSVQPETLLPAIQEAIRRVDGTVPV HHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCHH YRALTLEQVISQSLAMRRLVLGLLGGFAVLAVLLAAYGLYGVISLRVVQRTRELGVRMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC GARPADVLRLVLGQGAGMTAVGLGVGLGAAWALSQVLASQLHGVSARDPWTFGAVAALLA CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AVALLACWIPARRAIRMDPLQALRKE HHHHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA