| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763109
Identifier: 108763109
GI number: 108763109
Start: 58837
End: 59880
Strand: Reverse
Name: 108763109
Synonym: MXAN_0052
Alternate gene names: NA
Gene position: 59880-58837 (Counterclockwise)
Preceding gene: 108762090
Following gene: 108763947
Centisome position: 0.66
GC content: 70.88
Gene sequence:
>1044_bases ATGGGGCACCCCTCCACCGAGAACCTCACGCCCTTCACCTTCGAGCCGCTGTTCCTCACCGACGAGGCGCTGCGGCCCCT GTTCGTGCCCGTGTTGAAGGCCACGTTCGACCTGCGGCCTCGGGGCGCGCCGACGCTGTCCGCGGAGCAGGCGCCGCTGC TGACCGGGGGTGAGCGCTGGGACGGCGGGGATGTGGCCAGCCTCCGCCTGGAACCCGAAGGCGCCTTCTTCAAGGCCGCC ACGGACGTGGTGCTGGTGGGACATGCCCATGCGCCCGCGGCGGGGACCCGCGAGCTCCTCGCCGAGTTGCATGTCGGGCC CGTGCACAAACAGGTCCGTGTGCTGGGGGACCGCACGTGGTTCAAGAGCATGGGCGGCATCGGGGTGACGCAGCCCCTCC CCTTCGAGCGCGTCCCCGTGCGCTATGAGCGCGCCTTCGGCGGGAAGGACGGCAGCGCCTTCGAGTCGCGCAACCCGCTG GGCATGGGCTTTCGCGAGAAGGGCAGCCGCTTCGAGGAGAACCTGCGGCTGCCGAACCTGGAGTCTCCCACCGAGCCGCT GAGGTCCTGGGGCCAGCGTCCTCCGCCCACGGGCTTCGGGTTCATCGAACCACACTGGCAGCCCCGGGCCGGCTACGCGG GCACCTACGATGACGCGTGGAAGAAGTCGCGCAGCCCGTTGCTGCCGAAGGACTTCGACCGGCGCTTCCTCAACGGCGCG CCGCAGGACCAGCTCGTCCCGGGCTACCTGCGAGGGGGCGAGGCCGTGCTGCTGAAGCACATGGCGCCGGGTGCGCCGCT GACGTTCAGATTGCCCGCGCTGCCGTCTCCTGAGGTCCTCGCGCCCAGGGCCCGGGGGCTGGATGACCTGGAAGGAGCGC TGCGGCTGGACACCGTGGTCCTGGACACGGACGCGATGAAGCTGTTCCTCGTGTGGCGCGGCACCTTCGCGTTGCAGCGC GAGCCCACGGAGCTGCGCTCCATCCAGGTAACGTGCGAGGGCGCGGAGACGCTGGAGCCGGGGCAACCCGTCGGAACGGA CTGA
Upstream 100 bases:
>100_bases TTGTGTGAGGGCACGGCGTGGACGGGAGGTGGAGCGCGGGCTGACAGCCGGGCTCCGGCTGTCCGTGTCCCAAACGGGTG AGGACTGGTAGACATGTTTC
Downstream 100 bases:
>100_bases CGGGGTTATCGGGTCGGCGCCGTGTCGACGGCCCAGTCGCCCGAGTACGTCGTCGTCATTGGGACGCGGGCCAGGGGCGG GCAGTAGCGGAAGCTGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MGHPSTENLTPFTFEPLFLTDEALRPLFVPVLKATFDLRPRGAPTLSAEQAPLLTGGERWDGGDVASLRLEPEGAFFKAA TDVVLVGHAHAPAAGTRELLAELHVGPVHKQVRVLGDRTWFKSMGGIGVTQPLPFERVPVRYERAFGGKDGSAFESRNPL GMGFREKGSRFEENLRLPNLESPTEPLRSWGQRPPPTGFGFIEPHWQPRAGYAGTYDDAWKKSRSPLLPKDFDRRFLNGA PQDQLVPGYLRGGEAVLLKHMAPGAPLTFRLPALPSPEVLAPRARGLDDLEGALRLDTVVLDTDAMKLFLVWRGTFALQR EPTELRSIQVTCEGAETLEPGQPVGTD
Sequences:
>Translated_347_residues MGHPSTENLTPFTFEPLFLTDEALRPLFVPVLKATFDLRPRGAPTLSAEQAPLLTGGERWDGGDVASLRLEPEGAFFKAA TDVVLVGHAHAPAAGTRELLAELHVGPVHKQVRVLGDRTWFKSMGGIGVTQPLPFERVPVRYERAFGGKDGSAFESRNPL GMGFREKGSRFEENLRLPNLESPTEPLRSWGQRPPPTGFGFIEPHWQPRAGYAGTYDDAWKKSRSPLLPKDFDRRFLNGA PQDQLVPGYLRGGEAVLLKHMAPGAPLTFRLPALPSPEVLAPRARGLDDLEGALRLDTVVLDTDAMKLFLVWRGTFALQR EPTELRSIQVTCEGAETLEPGQPVGTD >Mature_346_residues GHPSTENLTPFTFEPLFLTDEALRPLFVPVLKATFDLRPRGAPTLSAEQAPLLTGGERWDGGDVASLRLEPEGAFFKAAT DVVLVGHAHAPAAGTRELLAELHVGPVHKQVRVLGDRTWFKSMGGIGVTQPLPFERVPVRYERAFGGKDGSAFESRNPLG MGFREKGSRFEENLRLPNLESPTEPLRSWGQRPPPTGFGFIEPHWQPRAGYAGTYDDAWKKSRSPLLPKDFDRRFLNGAP QDQLVPGYLRGGEAVLLKHMAPGAPLTFRLPALPSPEVLAPRARGLDDLEGALRLDTVVLDTDAMKLFLVWRGTFALQRE PTELRSIQVTCEGAETLEPGQPVGTD
Specific function: Unknown
COG id: COG5351
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38110; Mature: 37979
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHPSTENLTPFTFEPLFLTDEALRPLFVPVLKATFDLRPRGAPTLSAEQAPLLTGGERW CCCCCCCCCCCEEECCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DGGDVASLRLEPEGAFFKAATDVVLVGHAHAPAAGTRELLAELHVGPVHKQVRVLGDRTW CCCCEEEEEECCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHCHHH FKSMGGIGVTQPLPFERVPVRYERAFGGKDGSAFESRNPLGMGFREKGSRFEENLRLPNL HHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCCCC ESPTEPLRSWGQRPPPTGFGFIEPHWQPRAGYAGTYDDAWKKSRSPLLPKDFDRRFLNGA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCC PQDQLVPGYLRGGEAVLLKHMAPGAPLTFRLPALPSPEVLAPRARGLDDLEGALRLDTVV CCCCCCCHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHCCCHHHHHHEEEEEEE LDTDAMKLFLVWRGTFALQREPTELRSIQVTCEGAETLEPGQPVGTD ECCCCEEEEEEEECCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure GHPSTENLTPFTFEPLFLTDEALRPLFVPVLKATFDLRPRGAPTLSAEQAPLLTGGERW CCCCCCCCCCEEECCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC DGGDVASLRLEPEGAFFKAATDVVLVGHAHAPAAGTRELLAELHVGPVHKQVRVLGDRTW CCCCEEEEEECCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHCHHH FKSMGGIGVTQPLPFERVPVRYERAFGGKDGSAFESRNPLGMGFREKGSRFEENLRLPNL HHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCCCC ESPTEPLRSWGQRPPPTGFGFIEPHWQPRAGYAGTYDDAWKKSRSPLLPKDFDRRFLNGA CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHCCC PQDQLVPGYLRGGEAVLLKHMAPGAPLTFRLPALPSPEVLAPRARGLDDLEGALRLDTVV CCCCCCCHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCHHCCCHHHHHHEEEEEEE LDTDAMKLFLVWRGTFALQREPTELRSIQVTCEGAETLEPGQPVGTD ECCCCEEEEEEEECCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA