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The map label for this gene is yhfW [H]

Identifier: 108763080

GI number: 108763080

Start: 1826270

End: 1827784

Strand: Direct

Name: yhfW [H]

Synonym: MXAN_1554

Alternate gene names: 108763080

Gene position: 1826270-1827784 (Clockwise)

Preceding gene: 108761119

Following gene: 108757616

Centisome position: 19.98

GC content: 70.89

Gene sequence:

>1515_bases
ATGGACGACGAGCAGCGGGCGCACAGGTCGCTTTGGACGGTGACGGCCCCCCCGCGGGACTTCCCGGCGCTGCCGGGTGA
CGTGACGGTGGACGTGGCCATCATTGGCGGGGGGATGGCGGGGCTGACCACGGCGTGGCTCCTGAAGCGCGCTGGCAAGC
GCGTGGTGGTGCTGGACATGCACCGCATCCTGTCGGGGCAGACGGGCCAGACGACCGCGCACCTCACCGAGGTGCTCGAC
ACGCCCTACGCCACGCTGCGGCGCGACTTCGGTGAGAAGGGGGCTCAGCTCGCGGCGTCCTCCAGCCGCGCGGCCATCGA
GCAGATCGCCGCGCGGGTCGACGAGCTCGGCATCGACTGTGACTTCCAGCGCGTGCCCATGTACCGCTACGCGGAGACGG
AGCGCGAGCTGGCCGAGCTGCACCACGAAGTCACCGCCGCGCGCGAGGCCGGCTTGCTGGCCACCTTCACCCAGGACGTG
CCCTTGCCGTATCCCGTGAAGGGCGCCCTGCGGGTGGAGGACCAGGCGCTCTTCCATCCTCGCAAGTACCTGCTGGCGCT
GGCGGACCGGATTCCCGGCGACGGCAGCCACATCTTCGAGAACACGCGGGTGACGGAGGTTCACGACGGCGCGCCCTGCC
GCGTCGTTACCGACCGGGGCACCGTCACCGCCGCGGCCGTGGTGGAGGCCACCACCACGCCGCTCAACCGCGTGGCCATG
CACACCAAGCTCTACCCCTACCGCACCTACGTGGTGGCAGGGCCGCTCAACGGGCCGCTGGAGCCGGGCCAGTACTGCGA
CAGCCAGGAGCCCTATCACTACATCCGCACGCAGCAGGTGAACGGGCGCACCTACGTCATCGTGGGCGGCGAGGACCACA
AGGTCGGCACCGACGAGGACACCGCCCGGCGCTACGCCGCGCTGGAGGCCTACACGCTGCGGCGCTTCCCGGTGACGGAC
ATCACCCACCGCTGGTCCGGCCAGGTCATCGAGCCCGCGGACGGGCTGGCGTACATCGGCCGCAACACGGCCAGCCGCCA
CGTGTACGTGGCCACCGGCTTCTCCGGCACGGGCATGACGTTCGGCACGCTGGCGGGGATGATTCTCTCCGACGCCATCC
TCGACAGGCAGAACCCCTTCGCGGCGCTCTACTCGGCGACGCGGGTGAAGCCCCAGGCGGGCGCGAAGGACTTCATCCAG
GAGAACGCGGAGGTCGCCTTCCGCTTCGTCGCGGATCGCCTGTCCCGGCCGAACGAGCACCGGCTGGCGGACGTGGCGCC
CGGCGAGGGCAAGGTCCTGGAGGTGGCGGGACAGAAGGTCGCGGTGTACCGCGCGGAGGACGGCATCACGCACGCGGTGT
CCCCGGTGTGTACGCACCTGGGCTGCCACGTGCACTGGAACGGCGCGGAGCGCTCCTGGGACTGTCCCTGTCACGGGGGG
CGCTTCAGTCCCACCGGCAAGGTGCTCAACGGCCCCGCCGTGAAGGACCTGCCGGCGAAGAAGCTGCCGACCTGA

Upstream 100 bases:

>100_bases
CTCGTGTACATCTGCAACGCCTTGGAGCTGGGTAGGCGGCCAGCCGTGCGGTCCGCTCCCGTGGCTTATCGCTCCGAGGC
GCCGTTCCTAGCCTTGGGCC

Downstream 100 bases:

>100_bases
GCCACACGTCTTCACGCCTCAACACGACACCCATCATCCACAAGGGAGAGGGCGACCATGGACGCTATCGAACTGTTGGC
GCAGCAACACGACGAGGTGA

Product: Rieske family iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MDDEQRAHRSLWTVTAPPRDFPALPGDVTVDVAIIGGGMAGLTTAWLLKRAGKRVVVLDMHRILSGQTGQTTAHLTEVLD
TPYATLRRDFGEKGAQLAASSSRAAIEQIAARVDELGIDCDFQRVPMYRYAETERELAELHHEVTAAREAGLLATFTQDV
PLPYPVKGALRVEDQALFHPRKYLLALADRIPGDGSHIFENTRVTEVHDGAPCRVVTDRGTVTAAAVVEATTTPLNRVAM
HTKLYPYRTYVVAGPLNGPLEPGQYCDSQEPYHYIRTQQVNGRTYVIVGGEDHKVGTDEDTARRYAALEAYTLRRFPVTD
ITHRWSGQVIEPADGLAYIGRNTASRHVYVATGFSGTGMTFGTLAGMILSDAILDRQNPFAALYSATRVKPQAGAKDFIQ
ENAEVAFRFVADRLSRPNEHRLADVAPGEGKVLEVAGQKVAVYRAEDGITHAVSPVCTHLGCHVHWNGAERSWDCPCHGG
RFSPTGKVLNGPAVKDLPAKKLPT

Sequences:

>Translated_504_residues
MDDEQRAHRSLWTVTAPPRDFPALPGDVTVDVAIIGGGMAGLTTAWLLKRAGKRVVVLDMHRILSGQTGQTTAHLTEVLD
TPYATLRRDFGEKGAQLAASSSRAAIEQIAARVDELGIDCDFQRVPMYRYAETERELAELHHEVTAAREAGLLATFTQDV
PLPYPVKGALRVEDQALFHPRKYLLALADRIPGDGSHIFENTRVTEVHDGAPCRVVTDRGTVTAAAVVEATTTPLNRVAM
HTKLYPYRTYVVAGPLNGPLEPGQYCDSQEPYHYIRTQQVNGRTYVIVGGEDHKVGTDEDTARRYAALEAYTLRRFPVTD
ITHRWSGQVIEPADGLAYIGRNTASRHVYVATGFSGTGMTFGTLAGMILSDAILDRQNPFAALYSATRVKPQAGAKDFIQ
ENAEVAFRFVADRLSRPNEHRLADVAPGEGKVLEVAGQKVAVYRAEDGITHAVSPVCTHLGCHVHWNGAERSWDCPCHGG
RFSPTGKVLNGPAVKDLPAKKLPT
>Mature_504_residues
MDDEQRAHRSLWTVTAPPRDFPALPGDVTVDVAIIGGGMAGLTTAWLLKRAGKRVVVLDMHRILSGQTGQTTAHLTEVLD
TPYATLRRDFGEKGAQLAASSSRAAIEQIAARVDELGIDCDFQRVPMYRYAETERELAELHHEVTAAREAGLLATFTQDV
PLPYPVKGALRVEDQALFHPRKYLLALADRIPGDGSHIFENTRVTEVHDGAPCRVVTDRGTVTAAAVVEATTTPLNRVAM
HTKLYPYRTYVVAGPLNGPLEPGQYCDSQEPYHYIRTQQVNGRTYVIVGGEDHKVGTDEDTARRYAALEAYTLRRFPVTD
ITHRWSGQVIEPADGLAYIGRNTASRHVYVATGFSGTGMTFGTLAGMILSDAILDRQNPFAALYSATRVKPQAGAKDFIQ
ENAEVAFRFVADRLSRPNEHRLADVAPGEGKVLEVAGQKVAVYRAEDGITHAVSPVCTHLGCHVHWNGAERSWDCPCHGG
RFSPTGKVLNGPAVKDLPAKKLPT

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=385, Percent_Identity=26.2337662337662, Blast_Score=95, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 55048; Mature: 55048

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDEQRAHRSLWTVTAPPRDFPALPGDVTVDVAIIGGGMAGLTTAWLLKRAGKRVVVLDM
CCCHHHHHHCEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEH
HRILSGQTGQTTAHLTEVLDTPYATLRRDFGEKGAQLAASSSRAAIEQIAARVDELGIDC
HHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
DFQRVPMYRYAETERELAELHHEVTAAREAGLLATFTQDVPLPYPVKGALRVEDQALFHP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEECCHHHHHH
RKYLLALADRIPGDGSHIFENTRVTEVHDGAPCRVVTDRGTVTAAAVVEATTTPLNRVAM
HHHHHHHHHHCCCCCCCEECCCEEEEECCCCCEEEEECCCCEEEEEEEEECCCCHHHHHH
HTKLYPYRTYVVAGPLNGPLEPGQYCDSQEPYHYIRTQQVNGRTYVIVGGEDHKVGTDED
HHEECEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCHH
TARRYAALEAYTLRRFPVTDITHRWSGQVIEPADGLAYIGRNTASRHVYVATGFSGTGMT
HHHHHHHHHHHEEECCCCCCCCCCCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCCCH
FGTLAGMILSDAILDRQNPFAALYSATRVKPQAGAKDFIQENAEVAFRFVADRLSRPNEH
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCC
RLADVAPGEGKVLEVAGQKVAVYRAEDGITHAVSPVCTHLGCHVHWNGAERSWDCPCHGG
CEEECCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
RFSPTGKVLNGPAVKDLPAKKLPT
CCCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDEQRAHRSLWTVTAPPRDFPALPGDVTVDVAIIGGGMAGLTTAWLLKRAGKRVVVLDM
CCCHHHHHHCEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEH
HRILSGQTGQTTAHLTEVLDTPYATLRRDFGEKGAQLAASSSRAAIEQIAARVDELGIDC
HHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
DFQRVPMYRYAETERELAELHHEVTAAREAGLLATFTQDVPLPYPVKGALRVEDQALFHP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEECCHHHHHH
RKYLLALADRIPGDGSHIFENTRVTEVHDGAPCRVVTDRGTVTAAAVVEATTTPLNRVAM
HHHHHHHHHHCCCCCCCEECCCEEEEECCCCCEEEEECCCCEEEEEEEEECCCCHHHHHH
HTKLYPYRTYVVAGPLNGPLEPGQYCDSQEPYHYIRTQQVNGRTYVIVGGEDHKVGTDED
HHEECEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCCCCCHH
TARRYAALEAYTLRRFPVTDITHRWSGQVIEPADGLAYIGRNTASRHVYVATGFSGTGMT
HHHHHHHHHHHEEECCCCCCCCCCCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCCCH
FGTLAGMILSDAILDRQNPFAALYSATRVKPQAGAKDFIQENAEVAFRFVADRLSRPNEH
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCC
RLADVAPGEGKVLEVAGQKVAVYRAEDGITHAVSPVCTHLGCHVHWNGAERSWDCPCHGG
CEEECCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
RFSPTGKVLNGPAVKDLPAKKLPT
CCCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]