Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108763050

Identifier: 108763050

GI number: 108763050

Start: 7057107

End: 7058558

Strand: Reverse

Name: 108763050

Synonym: MXAN_5693

Alternate gene names: NA

Gene position: 7058558-7057107 (Counterclockwise)

Preceding gene: 108758616

Following gene: 108760023

Centisome position: 77.23

GC content: 69.21

Gene sequence:

>1452_bases
TTGGCGCGCCGAACGGCCGACGATGAGGGACGGGGCTCCACCTCGTGCTTCACCTCGTCGGCCCCGAGGACATTCAGGAT
GACGCTGCGACCCACCACGACGCGAGCCGTTCCCCCGCGCCCGGCATCGGCCGCTTCGCCCCTCAATGCCGTCACCACGC
CGGGAGGAAGCTGGAGACGCTCGACGGCCCGCGAGGTGCCCATCAACGAGCTCCAGGAGAAGTTCGGCTGGAAGGATGAC
AGCTGGCAGGTGGGGTTGATGCAGGCCGCTGACGCGGCGGGCAGCAAGACGCGCGGTGGCAACGGGCAGGTGTCCGCGGC
GGAGCTGGAGCGCTACCTGGCCGCGCCCGAGGACGGGCAGTACCTGACGTCCACCGCGCTTCAGCAGAAGCGCTCCTCGC
TGGACGCGAAGCTCGCGCAGGGAAATGGCTCCGCGGTGGGCGTGGACGCCTTCGAGAGTGGCTGGCAGGCCACGGTGGCC
CGGCGCGCGGACCTGCTGGGGGGCAATGGAGACGGCCAGCTCAGCGCGGAGGAACTGGACGCGTTCATCCAGGCGTCGAA
GGCGGGCAAGCACGCGGACACCCGCTGGGTGCCGGACCAGCAGATGGCCGCGTTCCAGAGCCGCGTGGCCGAAGCGGCCG
GAGAGCTGGACCCGATGCGTCCCGCCGGAGCGCTGGGCTCGGAGGGGCTCAGCCTGGTGAAGGAGTACTCGCGCCTGGCG
CTGGACCAGGGGGCGAACGTCCCCACCTTCGTGAGCTACATGCTGTCCGCGTCCGACATCCAGGAGACGCCCGCGACGGT
GTCCCGGCTGGAGAGCACCTTCGTTCGCGACCCCGAGCTGGGGCGCACCGGCGTCACCGACTCCGACTACACGCGGACGG
GCTTCGACCGGGGCCACATGAAGCCGGCGGAGGACTCGCCCACGCAGGAGGCGATGAACGAGAGCCACCTGATGACCAAC
ATCGCCCCCCAGCACGGCAACCACAACCAGCAGGTGTGGCGCACGCTGGAGCAGGGCGTCTCCGGTCTCGTGAACTCGCA
GGGCGGCAAGGCGTACATCCTCACCGGCAACCTGTACCTGGATGACAAGGGACAGCCGCTGCCTCCGGAGAAGCGGGAGA
CGACGGGGGCGGGGGAGCGCCGCATCGCCGTGCCCACGCACAACTTCAAGACGGTCCTCCACGAGCTGCCGAACGGCAGC
CTCACGATGTACGCGTACCTGGTGCCCAACACGAAGGACGGGCCGTCGAAGAAGGAGGACATCCTCCCGCTGCTCGATTC
GCACCGCGTACCCGTGGACCGCATCGAGGAACTGCTGGGGCAGGACCTCTACGCAAACCTGCCCAAGCGGGTGCAGGACA
AGCTGGAGAAGGGCACGTCGGCCGAAGGCGTCTTCCAGCGCAACAGCCTGTACTTCGCCGCCAGCCTGTTCCGTTTCGCG
CCCGGCAACTGA

Upstream 100 bases:

>100_bases
CCCTTCGAAAGCCCCAGGAAAGAAGGGTTAGGCGGGTATCCAGGTGCGAAGCGACCCCCAGGTTCTTTTTCTTCGTAAGA
AAACGGAGCCGTGACGCAAC

Downstream 100 bases:

>100_bases
CGCGGGGCTTCACAGCCTGGGCTTCGCTTCCGGGGGAAGCACGGGCTTACGCCACGGGACGCGGTACCCCCAGGTGTGGG
TCATCCACGTGCTCGACGAC

Product: DNA/RNA non-specific endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MARRTADDEGRGSTSCFTSSAPRTFRMTLRPTTTRAVPPRPASAASPLNAVTTPGGSWRRSTAREVPINELQEKFGWKDD
SWQVGLMQAADAAGSKTRGGNGQVSAAELERYLAAPEDGQYLTSTALQQKRSSLDAKLAQGNGSAVGVDAFESGWQATVA
RRADLLGGNGDGQLSAEELDAFIQASKAGKHADTRWVPDQQMAAFQSRVAEAAGELDPMRPAGALGSEGLSLVKEYSRLA
LDQGANVPTFVSYMLSASDIQETPATVSRLESTFVRDPELGRTGVTDSDYTRTGFDRGHMKPAEDSPTQEAMNESHLMTN
IAPQHGNHNQQVWRTLEQGVSGLVNSQGGKAYILTGNLYLDDKGQPLPPEKRETTGAGERRIAVPTHNFKTVLHELPNGS
LTMYAYLVPNTKDGPSKKEDILPLLDSHRVPVDRIEELLGQDLYANLPKRVQDKLEKGTSAEGVFQRNSLYFAASLFRFA
PGN

Sequences:

>Translated_483_residues
MARRTADDEGRGSTSCFTSSAPRTFRMTLRPTTTRAVPPRPASAASPLNAVTTPGGSWRRSTAREVPINELQEKFGWKDD
SWQVGLMQAADAAGSKTRGGNGQVSAAELERYLAAPEDGQYLTSTALQQKRSSLDAKLAQGNGSAVGVDAFESGWQATVA
RRADLLGGNGDGQLSAEELDAFIQASKAGKHADTRWVPDQQMAAFQSRVAEAAGELDPMRPAGALGSEGLSLVKEYSRLA
LDQGANVPTFVSYMLSASDIQETPATVSRLESTFVRDPELGRTGVTDSDYTRTGFDRGHMKPAEDSPTQEAMNESHLMTN
IAPQHGNHNQQVWRTLEQGVSGLVNSQGGKAYILTGNLYLDDKGQPLPPEKRETTGAGERRIAVPTHNFKTVLHELPNGS
LTMYAYLVPNTKDGPSKKEDILPLLDSHRVPVDRIEELLGQDLYANLPKRVQDKLEKGTSAEGVFQRNSLYFAASLFRFA
PGN
>Mature_482_residues
ARRTADDEGRGSTSCFTSSAPRTFRMTLRPTTTRAVPPRPASAASPLNAVTTPGGSWRRSTAREVPINELQEKFGWKDDS
WQVGLMQAADAAGSKTRGGNGQVSAAELERYLAAPEDGQYLTSTALQQKRSSLDAKLAQGNGSAVGVDAFESGWQATVAR
RADLLGGNGDGQLSAEELDAFIQASKAGKHADTRWVPDQQMAAFQSRVAEAAGELDPMRPAGALGSEGLSLVKEYSRLAL
DQGANVPTFVSYMLSASDIQETPATVSRLESTFVRDPELGRTGVTDSDYTRTGFDRGHMKPAEDSPTQEAMNESHLMTNI
APQHGNHNQQVWRTLEQGVSGLVNSQGGKAYILTGNLYLDDKGQPLPPEKRETTGAGERRIAVPTHNFKTVLHELPNGSL
TMYAYLVPNTKDGPSKKEDILPLLDSHRVPVDRIEELLGQDLYANLPKRVQDKLEKGTSAEGVFQRNSLYFAASLFRFAP
GN

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA/RNA non-specific endonuclease family [H]

Homologues:

Organism=Homo sapiens, GI53759134, Length=166, Percent_Identity=30.7228915662651, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI224451073, Length=249, Percent_Identity=26.5060240963855, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17505967, Length=173, Percent_Identity=32.3699421965318, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322253, Length=186, Percent_Identity=32.258064516129, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI20129899, Length=193, Percent_Identity=33.6787564766839, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24581065, Length=236, Percent_Identity=32.2033898305085, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018524
- InterPro:   IPR001604
- InterPro:   IPR020821 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: NA

Molecular weight: Translated: 52249; Mature: 52117

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRTADDEGRGSTSCFTSSAPRTFRMTLRPTTTRAVPPRPASAASPLNAVTTPGGSWRR
CCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCHH
STAREVPINELQEKFGWKDDSWQVGLMQAADAAGSKTRGGNGQVSAAELERYLAAPEDGQ
CCCCCCCHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCCCCC
YLTSTALQQKRSSLDAKLAQGNGSAVGVDAFESGWQATVARRADLLGGNGDGQLSAEELD
HHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHH
AFIQASKAGKHADTRWVPDQQMAAFQSRVAEAAGELDPMRPAGALGSEGLSLVKEYSRLA
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
LDQGANVPTFVSYMLSASDIQETPATVSRLESTFVRDPELGRTGVTDSDYTRTGFDRGHM
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
KPAEDSPTQEAMNESHLMTNIAPQHGNHNQQVWRTLEQGVSGLVNSQGGKAYILTGNLYL
CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEE
DDKGQPLPPEKRETTGAGERRIAVPTHNFKTVLHELPNGSLTMYAYLVPNTKDGPSKKED
CCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHH
ILPLLDSHRVPVDRIEELLGQDLYANLPKRVQDKLEKGTSAEGVFQRNSLYFAASLFRFA
HHHHHHCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC
PGN
CCC
>Mature Secondary Structure 
ARRTADDEGRGSTSCFTSSAPRTFRMTLRPTTTRAVPPRPASAASPLNAVTTPGGSWRR
CCCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCHH
STAREVPINELQEKFGWKDDSWQVGLMQAADAAGSKTRGGNGQVSAAELERYLAAPEDGQ
CCCCCCCHHHHHHHHCCCCCCCEEEHHHHHCCCCCCCCCCCCCEEHHHHHHHHCCCCCCC
YLTSTALQQKRSSLDAKLAQGNGSAVGVDAFESGWQATVARRADLLGGNGDGQLSAEELD
HHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHH
AFIQASKAGKHADTRWVPDQQMAAFQSRVAEAAGELDPMRPAGALGSEGLSLVKEYSRLA
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
LDQGANVPTFVSYMLSASDIQETPATVSRLESTFVRDPELGRTGVTDSDYTRTGFDRGHM
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
KPAEDSPTQEAMNESHLMTNIAPQHGNHNQQVWRTLEQGVSGLVNSQGGKAYILTGNLYL
CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEE
DDKGQPLPPEKRETTGAGERRIAVPTHNFKTVLHELPNGSLTMYAYLVPNTKDGPSKKED
CCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHH
ILPLLDSHRVPVDRIEELLGQDLYANLPKRVQDKLEKGTSAEGVFQRNSLYFAASLFRFA
HHHHHHCCCCCHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCEEECCCHHHHHHHHHCC
PGN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]