| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is uidR [C]
Identifier: 108763011
GI number: 108763011
Start: 1008900
End: 1009562
Strand: Reverse
Name: uidR [C]
Synonym: MXAN_0887
Alternate gene names: 108763011
Gene position: 1009562-1008900 (Counterclockwise)
Preceding gene: 108756814
Following gene: 108760962
Centisome position: 11.05
GC content: 65.46
Gene sequence:
>663_bases ATGGCCAGGGAACCCGCCCAACGAGAGCTGAAACAAGAGCGTGCCGCGCGCACGCGCATGGACATTCTGGAAGCGGCCAT CCACCTCTTCGCGAGGCGAGGCTTCCTCGCCACGACGATGGCGGACTTATCCCGCGCCATCCGGATGACGCCCGGAGCGC TGTACTGGCACTTCCCCACCAAGGAAGACCTGCTGCTGGCTGCGATTGAGGAATTACACCAGCGCTGTCTGAGAGCCTTT CAGCTACCTGGAGACGACCGCGAGCTTCCGGCGCGGGAGCAATTCCAAGCCATCTGCGAGCGGACGCACCTCCTCCTTCG CGAGCACCGCGAATACGGAATCTTCTTCGCGATGCTCGCGGCCGAGGCCGCCGACTCCAATGACCAGGTAGCGGAGGCCA TCCGAGACAAGCTGGCCCTCTACGCGACGACGCTGGAGCGCCTCATCCGTCACGGGCAGCAGATGGGGGAGTTCCGGCAG GACGTGGACGCACTCGCCGCCGCGCACAGCCTCCTGGGCGGGCTCCTGGGCATGCTCGTGCACCAGAACCTCTTCCGCGC CTCCGTGGATTACGACCCGCTGTACCGCGCCGTCATGCGGATACACCTGGCGGGACTCGTGCAGGCCACAGGCTTCGACT GCGTCAATGCCAGCCAGTCCTGA
Upstream 100 bases:
>100_bases CAGCCGGGGAACAGGTTTCTGGGGTCCGCCGCTCCGCGTCGGAGCGCCGCCGGAGATCGTCCGGGTGACACTCCTGGCGT GATGCATAGATTCGGCGGGT
Downstream 100 bases:
>100_bases CATCCCTGACGCGGCAACGCCAGCCAGCGCCCGGATACATGCCAGCTCAAAATGAAACGGGCGGAACCCCATGTCAGGGT TCCGCCCGCTTGAAGCCTTA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator UidR
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAREPAQRELKQERAARTRMDILEAAIHLFARRGFLATTMADLSRAIRMTPGALYWHFPTKEDLLLAAIEELHQRCLRAF QLPGDDRELPAREQFQAICERTHLLLREHREYGIFFAMLAAEAADSNDQVAEAIRDKLALYATTLERLIRHGQQMGEFRQ DVDALAAAHSLLGGLLGMLVHQNLFRASVDYDPLYRAVMRIHLAGLVQATGFDCVNASQS
Sequences:
>Translated_220_residues MAREPAQRELKQERAARTRMDILEAAIHLFARRGFLATTMADLSRAIRMTPGALYWHFPTKEDLLLAAIEELHQRCLRAF QLPGDDRELPAREQFQAICERTHLLLREHREYGIFFAMLAAEAADSNDQVAEAIRDKLALYATTLERLIRHGQQMGEFRQ DVDALAAAHSLLGGLLGMLVHQNLFRASVDYDPLYRAVMRIHLAGLVQATGFDCVNASQS >Mature_219_residues AREPAQRELKQERAARTRMDILEAAIHLFARRGFLATTMADLSRAIRMTPGALYWHFPTKEDLLLAAIEELHQRCLRAFQ LPGDDRELPAREQFQAICERTHLLLREHREYGIFFAMLAAEAADSNDQVAEAIRDKLALYATTLERLIRHGQQMGEFRQD VDALAAAHSLLGGLLGMLVHQNLFRASVDYDPLYRAVMRIHLAGLVQATGFDCVNASQS
Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24912; Mature: 24781
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50977 HTH_TETR_2 ; PS00435 PEROXIDASE_1 ; PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREPAQRELKQERAARTRMDILEAAIHLFARRGFLATTMADLSRAIRMTPGALYWHFPT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCC KEDLLLAAIEELHQRCLRAFQLPGDDRELPAREQFQAICERTHLLLREHREYGIFFAMLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAADSNDQVAEAIRDKLALYATTLERLIRHGQQMGEFRQDVDALAAAHSLLGGLLGMLV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQNLFRASVDYDPLYRAVMRIHLAGLVQATGFDCVNASQS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AREPAQRELKQERAARTRMDILEAAIHLFARRGFLATTMADLSRAIRMTPGALYWHFPT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCC KEDLLLAAIEELHQRCLRAFQLPGDDRELPAREQFQAICERTHLLLREHREYGIFFAMLA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAADSNDQVAEAIRDKLALYATTLERLIRHGQQMGEFRQDVDALAAAHSLLGGLLGMLV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HQNLFRASVDYDPLYRAVMRIHLAGLVQATGFDCVNASQS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA