| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yebA [C]
Identifier: 108763007
GI number: 108763007
Start: 2062286
End: 2063644
Strand: Reverse
Name: yebA [C]
Synonym: MXAN_1741
Alternate gene names: 108763007
Gene position: 2063644-2062286 (Counterclockwise)
Preceding gene: 108761203
Following gene: 108762283
Centisome position: 22.58
GC content: 67.62
Gene sequence:
>1359_bases ATGTCTCCCGAGTCCCGCAACCGTCGCCAATTCTCCCGGCGCTCCCTTCTGCGTGCCGGCAGTGTCGCGGCCGGTTTCGC CGCCTTTGGCAGGTCTGGCCTGCTGATTGGCACCGCCCACGCCGCAGAGACAATCATCAACCCATTCACTGGCTACTCAA TCTCGGATGGGTGGTGGGACCACGTCAACCGCGGCTCCCTGGGCGGCATCGACTACGTGATGGGCGTTGGTACGCCGCTC CCGGCCTGCGCGTCGGGGCAGCTCCGGATCGACTGGAACAACGGCACGGGCGGCTACACCGCGACCATCGTGATGGCCAA CGGAATGAGGAGCCAGTACCTCCACCTGTCTGGATTCAACGGCGGCGAGCGCTACGTCCAACAGGGAGAAATCGTCGGGT ACTCCGGGGGCGCTGCGGGTGCACCCGGCTCCGGGTCCTCGACGGGTCCGCATCTGCACTGGCATCTGGTGACCGCCGGC GGCACCCGGGTGAACCCGCTCGACTACGTCGGCGCCGGCAGCGGCGGCACCGGGGGCGGTCTGCCGCTGGAGGACCGGCG CCTCGGGCATCTCGGCACCGCGGGGGGCTGGGCCCACATGCTCAGCAACCTCGTGCTGCCGGGCAACACGACCTACGGGG CGTTCTCGCCGGGCCCTGGACAGTCGCCGCGCGCCATGGCGAACATCGACGGCGTGATGATGCTGGTCTACGCCGGCAGC AACGGCTGGACCACGATGAGCAGTGGCCTGGCGATGGACCCGGGGGCGCCGCTCAACGTGCTGCGGACCCCGGCCAATGC CTCGGCCCAAATCTTTACCCTCGAAGACGGACGGCTCTGGCACACCTTCGACGGCAATGGCTGGAAGAAGTTCCCGTCGT CCGTGACGGTGTCTGGCAACTGCACCTTCTCGATGACGGCCAATGGAACGGACCTTCATGGCCTGTTCAACGACAACGGC CGGCTGTTCCATGTCTGGGCTGACGGTTCCGGCTGGCACAAGGGTGACACCCAGGTGGACCTGCAGCCCGGCTCCGACCT GGTCGCCGTGATTCAGCCGGATGGAAGCCTGCAAGGCCTGTCACTGGAGTTCAGCCGGGTGCACCACATCTTCGGGGCAA ACGGGAGGTGGAACCGGATACCGACCACGGCGTCCCTACCGACTGGGACGCCCATCGCCGGCCGCGCCGCCTATGGCTGG CCGCAGTTGGTCGCCAACCACAACGGTGCCATCACCCACGTCTGGGGCACCTCGTCGGGCTGGATGTGCGTGCCGACTGG ACAGACGACGAACCCGGGACGGCGGCTCAGCCTCGTCCCGGATGTCGCCTCGGCCTCGTTGGTCGGCCTGACACTCTGA
Upstream 100 bases:
>100_bases GCCAATAACTCGCGGCGGTTCCACTGCCTGGGCGAGCCACAGACCGTGACAAAACGAGCCGCAGTCTTCACGACCTCTCC CCATCCCCACTCGAGGTTTT
Downstream 100 bases:
>100_bases GACGCGCCTCACCTCCTCGGACGAGGGCGCCCCACACGCCCGCGCTGCCCGGTCCAGGGTTCGGTCCGACGATGTTTCTT TCACATCGCCAGGCAACTTT
Product: M23 peptidase domain-containing protein
Products: NA
Alternate protein names: M23 Peptidase Domain-Containing Protein
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWDHVNRGSLGGIDYVMGVGTPL PACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFNGGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAG GTRVNPLDYVGAGSGGTGGGLPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGS NGWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGNCTFSMTANGTDLHGLFNDNG RLFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGLSLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGW PQLVANHNGAITHVWGTSSGWMCVPTGQTTNPGRRLSLVPDVASASLVGLTL
Sequences:
>Translated_452_residues MSPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWDHVNRGSLGGIDYVMGVGTPL PACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFNGGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAG GTRVNPLDYVGAGSGGTGGGLPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGS NGWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGNCTFSMTANGTDLHGLFNDNG RLFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGLSLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGW PQLVANHNGAITHVWGTSSGWMCVPTGQTTNPGRRLSLVPDVASASLVGLTL >Mature_451_residues SPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWDHVNRGSLGGIDYVMGVGTPLP ACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFNGGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAGG TRVNPLDYVGAGSGGTGGGLPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGSN GWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGNCTFSMTANGTDLHGLFNDNGR LFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGLSLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGWP QLVANHNGAITHVWGTSSGWMCVPTGQTTNPGRRLSLVPDVASASLVGLTL
Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 47135; Mature: 47004
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWD CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHH HVNRGSLGGIDYVMGVGTPLPACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFN CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCC GGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAGGTRVNPLDYVGAGSGGTGGG CHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCC LPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGS CCCCCCCCCCCCCCCHHHHHHHCEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECC NGWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGN CCCEEECCCEEECCCCCCEEEECCCCCCEEEEEEECCEEEEEECCCCHHHCCCEEEEECC CTFSMTANGTDLHGLFNDNGRLFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGL EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEE SLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGWPQLVANHNGAITHVWGTSSG EEEHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEECCCC WMCVPTGQTTNPGRRLSLVPDVASASLVGLTL CEEEECCCCCCCCCEEEECCCCCCCEEEEEEC >Mature Secondary Structure SPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWD CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHH HVNRGSLGGIDYVMGVGTPLPACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFN CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCC GGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAGGTRVNPLDYVGAGSGGTGGG CHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCC LPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGS CCCCCCCCCCCCCCCHHHHHHHCEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECC NGWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGN CCCEEECCCEEECCCCCCEEEECCCCCCEEEEEEECCEEEEEECCCCHHHCCCEEEEECC CTFSMTANGTDLHGLFNDNGRLFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGL EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEE SLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGWPQLVANHNGAITHVWGTSSG EEEHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEECCCC WMCVPTGQTTNPGRRLSLVPDVASASLVGLTL CEEEECCCCCCCCCEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA