Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 108763007

GI number: 108763007

Start: 2062286

End: 2063644

Strand: Reverse

Name: yebA [C]

Synonym: MXAN_1741

Alternate gene names: 108763007

Gene position: 2063644-2062286 (Counterclockwise)

Preceding gene: 108761203

Following gene: 108762283

Centisome position: 22.58

GC content: 67.62

Gene sequence:

>1359_bases
ATGTCTCCCGAGTCCCGCAACCGTCGCCAATTCTCCCGGCGCTCCCTTCTGCGTGCCGGCAGTGTCGCGGCCGGTTTCGC
CGCCTTTGGCAGGTCTGGCCTGCTGATTGGCACCGCCCACGCCGCAGAGACAATCATCAACCCATTCACTGGCTACTCAA
TCTCGGATGGGTGGTGGGACCACGTCAACCGCGGCTCCCTGGGCGGCATCGACTACGTGATGGGCGTTGGTACGCCGCTC
CCGGCCTGCGCGTCGGGGCAGCTCCGGATCGACTGGAACAACGGCACGGGCGGCTACACCGCGACCATCGTGATGGCCAA
CGGAATGAGGAGCCAGTACCTCCACCTGTCTGGATTCAACGGCGGCGAGCGCTACGTCCAACAGGGAGAAATCGTCGGGT
ACTCCGGGGGCGCTGCGGGTGCACCCGGCTCCGGGTCCTCGACGGGTCCGCATCTGCACTGGCATCTGGTGACCGCCGGC
GGCACCCGGGTGAACCCGCTCGACTACGTCGGCGCCGGCAGCGGCGGCACCGGGGGCGGTCTGCCGCTGGAGGACCGGCG
CCTCGGGCATCTCGGCACCGCGGGGGGCTGGGCCCACATGCTCAGCAACCTCGTGCTGCCGGGCAACACGACCTACGGGG
CGTTCTCGCCGGGCCCTGGACAGTCGCCGCGCGCCATGGCGAACATCGACGGCGTGATGATGCTGGTCTACGCCGGCAGC
AACGGCTGGACCACGATGAGCAGTGGCCTGGCGATGGACCCGGGGGCGCCGCTCAACGTGCTGCGGACCCCGGCCAATGC
CTCGGCCCAAATCTTTACCCTCGAAGACGGACGGCTCTGGCACACCTTCGACGGCAATGGCTGGAAGAAGTTCCCGTCGT
CCGTGACGGTGTCTGGCAACTGCACCTTCTCGATGACGGCCAATGGAACGGACCTTCATGGCCTGTTCAACGACAACGGC
CGGCTGTTCCATGTCTGGGCTGACGGTTCCGGCTGGCACAAGGGTGACACCCAGGTGGACCTGCAGCCCGGCTCCGACCT
GGTCGCCGTGATTCAGCCGGATGGAAGCCTGCAAGGCCTGTCACTGGAGTTCAGCCGGGTGCACCACATCTTCGGGGCAA
ACGGGAGGTGGAACCGGATACCGACCACGGCGTCCCTACCGACTGGGACGCCCATCGCCGGCCGCGCCGCCTATGGCTGG
CCGCAGTTGGTCGCCAACCACAACGGTGCCATCACCCACGTCTGGGGCACCTCGTCGGGCTGGATGTGCGTGCCGACTGG
ACAGACGACGAACCCGGGACGGCGGCTCAGCCTCGTCCCGGATGTCGCCTCGGCCTCGTTGGTCGGCCTGACACTCTGA

Upstream 100 bases:

>100_bases
GCCAATAACTCGCGGCGGTTCCACTGCCTGGGCGAGCCACAGACCGTGACAAAACGAGCCGCAGTCTTCACGACCTCTCC
CCATCCCCACTCGAGGTTTT

Downstream 100 bases:

>100_bases
GACGCGCCTCACCTCCTCGGACGAGGGCGCCCCACACGCCCGCGCTGCCCGGTCCAGGGTTCGGTCCGACGATGTTTCTT
TCACATCGCCAGGCAACTTT

Product: M23 peptidase domain-containing protein

Products: NA

Alternate protein names: M23 Peptidase Domain-Containing Protein

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWDHVNRGSLGGIDYVMGVGTPL
PACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFNGGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAG
GTRVNPLDYVGAGSGGTGGGLPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGS
NGWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGNCTFSMTANGTDLHGLFNDNG
RLFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGLSLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGW
PQLVANHNGAITHVWGTSSGWMCVPTGQTTNPGRRLSLVPDVASASLVGLTL

Sequences:

>Translated_452_residues
MSPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWDHVNRGSLGGIDYVMGVGTPL
PACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFNGGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAG
GTRVNPLDYVGAGSGGTGGGLPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGS
NGWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGNCTFSMTANGTDLHGLFNDNG
RLFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGLSLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGW
PQLVANHNGAITHVWGTSSGWMCVPTGQTTNPGRRLSLVPDVASASLVGLTL
>Mature_451_residues
SPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWDHVNRGSLGGIDYVMGVGTPLP
ACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFNGGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAGG
TRVNPLDYVGAGSGGTGGGLPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGSN
GWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGNCTFSMTANGTDLHGLFNDNGR
LFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGLSLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGWP
QLVANHNGAITHVWGTSSGWMCVPTGQTTNPGRRLSLVPDVASASLVGLTL

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 47135; Mature: 47004

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWD
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHH
HVNRGSLGGIDYVMGVGTPLPACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFN
CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCC
GGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAGGTRVNPLDYVGAGSGGTGGG
CHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCC
LPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGS
CCCCCCCCCCCCCCCHHHHHHHCEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECC
NGWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGN
CCCEEECCCEEECCCCCCEEEECCCCCCEEEEEEECCEEEEEECCCCHHHCCCEEEEECC
CTFSMTANGTDLHGLFNDNGRLFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGL
EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEE
SLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGWPQLVANHNGAITHVWGTSSG
EEEHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEECCCC
WMCVPTGQTTNPGRRLSLVPDVASASLVGLTL
CEEEECCCCCCCCCEEEECCCCCCCEEEEEEC
>Mature Secondary Structure 
SPESRNRRQFSRRSLLRAGSVAAGFAAFGRSGLLIGTAHAAETIINPFTGYSISDGWWD
CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHH
HVNRGSLGGIDYVMGVGTPLPACASGQLRIDWNNGTGGYTATIVMANGMRSQYLHLSGFN
CCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCC
GGERYVQQGEIVGYSGGAAGAPGSGSSTGPHLHWHLVTAGGTRVNPLDYVGAGSGGTGGG
CHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCC
LPLEDRRLGHLGTAGGWAHMLSNLVLPGNTTYGAFSPGPGQSPRAMANIDGVMMLVYAGS
CCCCCCCCCCCCCCCHHHHHHHCEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECC
NGWTTMSSGLAMDPGAPLNVLRTPANASAQIFTLEDGRLWHTFDGNGWKKFPSSVTVSGN
CCCEEECCCEEECCCCCCEEEECCCCCCEEEEEEECCEEEEEECCCCHHHCCCEEEEECC
CTFSMTANGTDLHGLFNDNGRLFHVWADGSGWHKGDTQVDLQPGSDLVAVIQPDGSLQGL
EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEE
SLEFSRVHHIFGANGRWNRIPTTASLPTGTPIAGRAAYGWPQLVANHNGAITHVWGTSSG
EEEHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCEEEEEECCCC
WMCVPTGQTTNPGRRLSLVPDVASASLVGLTL
CEEEECCCCCCCCCEEEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA