| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762988
Identifier: 108762988
GI number: 108762988
Start: 2321823
End: 2323136
Strand: Direct
Name: 108762988
Synonym: MXAN_1987
Alternate gene names: NA
Gene position: 2321823-2323136 (Clockwise)
Preceding gene: 108761848
Following gene: 108762676
Centisome position: 25.4
GC content: 73.59
Gene sequence:
>1314_bases GTGGGTGTCCAGTCGCGCCAGCAAGCGGCCGTGCACGTCTCGGCTTCCCGGCCACGGGGTGATGCCGTACCCTGGCGGCC CATGTCGCGGCGCGGTCTGCTCGCCTTCTGTCTCCTCATTGCTGCCTGCAAGCGCGGCCCCCTGGCCTCTGAGGCGCCGG ACGCGTCATGTCCGGCCGTGCCCGCCCTCAGCGCGCCTGGCGCCGGGGCGCCCACCGCCAGCGTGCGTTCCGCACCGCCC CCGGAGGACGCCACTCACCGGATGCAGCCGCTGGCCGTGTGCCGCTCGGACGGCGCGGCCCCGTTGGATGCGTCGCGTCG CTACTTCGAGGAAGGCCGCTTCGAGGATGCACTGTCCTGCGCCGCCCAGGCCGCCGCGCTGGAGCCGGACCTGGCCGCCG CCCACGCGGAACGCGGCGTGGCGCTGGCCGCCCTGGGCCGCGAGACAGAGGCGCAGCTCGCCTACGCGCGGGCGCTCGCC ATCGACCCGGGGGACCCGTCCGCCCTTCTGGGCTCGGCGCACCTGTACGCCGTGCAACTGTCCTCCACCCGGGAGCGGGA CGAATTGGGCGCCCTCTACGCCGAGCGCGGCCTGTCCCAGCCCAACACGCCCCCGGAGCTGATTCCGCACCTCGCGCTGG TGGCCGCCATGGCCTTCAATGATTTGGGACAGGCGGAGTCCTCGCTGGCGCACTCCGCCATCGTCCTCGCGCGCAATCCC GGAAGCCGCGAGGCCCTCTACGAGCGCGCCCTGGCCCTCTTCGAGCTGTGCCGCTTCCGGGAGGCCCGCACCGCCTTCAC CAGTCTCGTGGACGACCCGGAGCGGGCCGCGCACGCCCATCATCACCTGGGGCTCCTGTTGGAGCGCGAGGGCAAGTGGA AGCAGGCGCAGGGCCACTTCGACAAGGCGCGCACGCTGGCGCCGGACGACTTTCCCGAGCCGCCGCTGCCCGCGGAGGAG GACTTCCGCGCCGAGGTGGTGAGGGCCGTCGCCGAGCTGCCCAAGGACATGCGCGGGGACTTGGACGGCGTGCCCGTCAC TGCGGAGGAGCTGCCCGCGGACGCGGACCTGCTGGCCAACCAGCCGCCGCTGTCGCCCACGATTCTGGGGCTCTACCGGG GCCCGCCGCTGGCCGAGCCCTGTGACGGCTCCGAGGTGCCGTGCCGCTCCGTGGTGCTCTACCGCCGCAACCTGGCGCGC GCCGCCCGGACGCCCGAGGAACTTCGCGAGCAGATCCGCGTGACGTTGCTGCACGAAATCGGGCACCTTCGCGGCGAGGA CGACGAAGAACTGGCCGCTCGCGGCCTGGAGTGA
Upstream 100 bases:
>100_bases GGGAAGCCTCAGTCCATCCATCAGGGCCCGCCGGGCGCTCGACGTGGAGGCCAGAATCAATTCGCTCATGGGACGGGCAA CCTAGTGCAGGGCGGGGCGG
Downstream 100 bases:
>100_bases GCCTGATGCCCCCCCATGCAGCCCTGCCCGTCGCGCGCGTCACCCCCAAGGGGGCGCGCTCGCTGCGGCACTTCAATCCC TGGGTGTACCGCACCGAAAT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MGVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAVPALSAPGAGAPTASVRSAPP PEDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSCAAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALA IDPGDPSALLGSAHLYAVQLSSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNP GSREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHFDKARTLAPDDFPEPPLPAEE DFRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLANQPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLAR AARTPEELREQIRVTLLHEIGHLRGEDDEELAARGLE
Sequences:
>Translated_437_residues MGVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAVPALSAPGAGAPTASVRSAPP PEDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSCAAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALA IDPGDPSALLGSAHLYAVQLSSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNP GSREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHFDKARTLAPDDFPEPPLPAEE DFRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLANQPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLAR AARTPEELREQIRVTLLHEIGHLRGEDDEELAARGLE >Mature_436_residues GVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAVPALSAPGAGAPTASVRSAPPP EDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSCAAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALAI DPGDPSALLGSAHLYAVQLSSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNPG SREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHFDKARTLAPDDFPEPPLPAEED FRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLANQPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLARA ARTPEELREQIRVTLLHEIGHLRGEDDEELAARGLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46806; Mature: 46675
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAV CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC PALSAPGAGAPTASVRSAPPPEDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSC CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHH AAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALAIDPGDPSALLGSAHLYAVQL HHHHHHCCCHHHHHHHHCCEEEEHHCCCHHHHHHHHHHEEECCCCCHHHHCCCEEEEEEE SSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNP CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC GSREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCCCCCHHCCCH DKARTLAPDDFPEPPLPAEEDFRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLAN HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHCCCCHHHHCC QPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLARAARTPEELREQIRVTLLHEI CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GHLRGEDDEELAARGLE HHCCCCCHHHHHHCCCC >Mature Secondary Structure GVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAV CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC PALSAPGAGAPTASVRSAPPPEDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSC CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHH AAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALAIDPGDPSALLGSAHLYAVQL HHHHHHCCCHHHHHHHHCCEEEEHHCCCHHHHHHHHHHEEECCCCCHHHHCCCEEEEEEE SSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNP CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC GSREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCCCCCHHCCCH DKARTLAPDDFPEPPLPAEEDFRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLAN HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHCCCCHHHHCC QPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLARAARTPEELREQIRVTLLHEI CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GHLRGEDDEELAARGLE HHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA