Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108762988

Identifier: 108762988

GI number: 108762988

Start: 2321823

End: 2323136

Strand: Direct

Name: 108762988

Synonym: MXAN_1987

Alternate gene names: NA

Gene position: 2321823-2323136 (Clockwise)

Preceding gene: 108761848

Following gene: 108762676

Centisome position: 25.4

GC content: 73.59

Gene sequence:

>1314_bases
GTGGGTGTCCAGTCGCGCCAGCAAGCGGCCGTGCACGTCTCGGCTTCCCGGCCACGGGGTGATGCCGTACCCTGGCGGCC
CATGTCGCGGCGCGGTCTGCTCGCCTTCTGTCTCCTCATTGCTGCCTGCAAGCGCGGCCCCCTGGCCTCTGAGGCGCCGG
ACGCGTCATGTCCGGCCGTGCCCGCCCTCAGCGCGCCTGGCGCCGGGGCGCCCACCGCCAGCGTGCGTTCCGCACCGCCC
CCGGAGGACGCCACTCACCGGATGCAGCCGCTGGCCGTGTGCCGCTCGGACGGCGCGGCCCCGTTGGATGCGTCGCGTCG
CTACTTCGAGGAAGGCCGCTTCGAGGATGCACTGTCCTGCGCCGCCCAGGCCGCCGCGCTGGAGCCGGACCTGGCCGCCG
CCCACGCGGAACGCGGCGTGGCGCTGGCCGCCCTGGGCCGCGAGACAGAGGCGCAGCTCGCCTACGCGCGGGCGCTCGCC
ATCGACCCGGGGGACCCGTCCGCCCTTCTGGGCTCGGCGCACCTGTACGCCGTGCAACTGTCCTCCACCCGGGAGCGGGA
CGAATTGGGCGCCCTCTACGCCGAGCGCGGCCTGTCCCAGCCCAACACGCCCCCGGAGCTGATTCCGCACCTCGCGCTGG
TGGCCGCCATGGCCTTCAATGATTTGGGACAGGCGGAGTCCTCGCTGGCGCACTCCGCCATCGTCCTCGCGCGCAATCCC
GGAAGCCGCGAGGCCCTCTACGAGCGCGCCCTGGCCCTCTTCGAGCTGTGCCGCTTCCGGGAGGCCCGCACCGCCTTCAC
CAGTCTCGTGGACGACCCGGAGCGGGCCGCGCACGCCCATCATCACCTGGGGCTCCTGTTGGAGCGCGAGGGCAAGTGGA
AGCAGGCGCAGGGCCACTTCGACAAGGCGCGCACGCTGGCGCCGGACGACTTTCCCGAGCCGCCGCTGCCCGCGGAGGAG
GACTTCCGCGCCGAGGTGGTGAGGGCCGTCGCCGAGCTGCCCAAGGACATGCGCGGGGACTTGGACGGCGTGCCCGTCAC
TGCGGAGGAGCTGCCCGCGGACGCGGACCTGCTGGCCAACCAGCCGCCGCTGTCGCCCACGATTCTGGGGCTCTACCGGG
GCCCGCCGCTGGCCGAGCCCTGTGACGGCTCCGAGGTGCCGTGCCGCTCCGTGGTGCTCTACCGCCGCAACCTGGCGCGC
GCCGCCCGGACGCCCGAGGAACTTCGCGAGCAGATCCGCGTGACGTTGCTGCACGAAATCGGGCACCTTCGCGGCGAGGA
CGACGAAGAACTGGCCGCTCGCGGCCTGGAGTGA

Upstream 100 bases:

>100_bases
GGGAAGCCTCAGTCCATCCATCAGGGCCCGCCGGGCGCTCGACGTGGAGGCCAGAATCAATTCGCTCATGGGACGGGCAA
CCTAGTGCAGGGCGGGGCGG

Downstream 100 bases:

>100_bases
GCCTGATGCCCCCCCATGCAGCCCTGCCCGTCGCGCGCGTCACCCCCAAGGGGGCGCGCTCGCTGCGGCACTTCAATCCC
TGGGTGTACCGCACCGAAAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MGVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAVPALSAPGAGAPTASVRSAPP
PEDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSCAAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALA
IDPGDPSALLGSAHLYAVQLSSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNP
GSREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHFDKARTLAPDDFPEPPLPAEE
DFRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLANQPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLAR
AARTPEELREQIRVTLLHEIGHLRGEDDEELAARGLE

Sequences:

>Translated_437_residues
MGVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAVPALSAPGAGAPTASVRSAPP
PEDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSCAAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALA
IDPGDPSALLGSAHLYAVQLSSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNP
GSREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHFDKARTLAPDDFPEPPLPAEE
DFRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLANQPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLAR
AARTPEELREQIRVTLLHEIGHLRGEDDEELAARGLE
>Mature_436_residues
GVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAVPALSAPGAGAPTASVRSAPPP
EDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSCAAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALAI
DPGDPSALLGSAHLYAVQLSSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNPG
SREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHFDKARTLAPDDFPEPPLPAEED
FRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLANQPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLARA
ARTPEELREQIRVTLLHEIGHLRGEDDEELAARGLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46806; Mature: 46675

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAV
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PALSAPGAGAPTASVRSAPPPEDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSC
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHH
AAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALAIDPGDPSALLGSAHLYAVQL
HHHHHHCCCHHHHHHHHCCEEEEHHCCCHHHHHHHHHHEEECCCCCHHHHCCCEEEEEEE
SSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNP
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
GSREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCCCCCHHCCCH
DKARTLAPDDFPEPPLPAEEDFRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLAN
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHCCCCHHHHCC
QPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLARAARTPEELREQIRVTLLHEI
CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GHLRGEDDEELAARGLE
HHCCCCCHHHHHHCCCC
>Mature Secondary Structure 
GVQSRQQAAVHVSASRPRGDAVPWRPMSRRGLLAFCLLIAACKRGPLASEAPDASCPAV
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PALSAPGAGAPTASVRSAPPPEDATHRMQPLAVCRSDGAAPLDASRRYFEEGRFEDALSC
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHH
AAQAAALEPDLAAAHAERGVALAALGRETEAQLAYARALAIDPGDPSALLGSAHLYAVQL
HHHHHHCCCHHHHHHHHCCEEEEHHCCCHHHHHHHHHHEEECCCCCHHHHCCCEEEEEEE
SSTRERDELGALYAERGLSQPNTPPELIPHLALVAAMAFNDLGQAESSLAHSAIVLARNP
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
GSREALYERALALFELCRFREARTAFTSLVDDPERAAHAHHHLGLLLEREGKWKQAQGHF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCCCCCHHCCCH
DKARTLAPDDFPEPPLPAEEDFRAEVVRAVAELPKDMRGDLDGVPVTAEELPADADLLAN
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHCCCCHHHHCC
QPPLSPTILGLYRGPPLAEPCDGSEVPCRSVVLYRRNLARAARTPEELREQIRVTLLHEI
CCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GHLRGEDDEELAARGLE
HHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA