| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is thrB [H]
Identifier: 108762975
GI number: 108762975
Start: 2938045
End: 2939016
Strand: Direct
Name: thrB [H]
Synonym: MXAN_2524
Alternate gene names: 108762975
Gene position: 2938045-2939016 (Clockwise)
Preceding gene: 108760355
Following gene: 108763008
Centisome position: 32.15
GC content: 70.37
Gene sequence:
>972_bases ATGGCGGTACACACGGCGCTACCCCGCGAGGCATTCGAGCGGGTCGCGGAGGCATTCGGGCTCGGGGCTGTGCGTGAGGT GACGCCCATTCCCCAGGGCTCCATCAACACCAACCACCGCGTGGAGACGCAGAGCGGGCGCTACTTCGTGCGCCACACCA CGGTGCGCTCCGCGGACGATTTGCGCTTCGAATCCGCGCTGCTCGCGCACCTGGCCGCGTACCACTTCCCCGGGCCCGTG CAGGTGACGACGCGTGACGGCGCGACCTTCCTGGAGCTGGAGGGTGGCCGCGTCAGCGTCTTCCGCTGGCTGCCGGGCGA GGAGCTGCGCCACCCGGCCCTCACCGCCGACCACCTGGAGCGGCTGGGCGCGGAGCTGGGCAAGCTGCACCGCGACACGC AGTCCTTCTCCGGCTCGAGGGAGAATCCCTACGGACCGGAGACGGTGAGCGGCTGGCTGGAGGCGCTGGTGGCGCACCCG GATGCGGAGCTGGCGGCCGTGGCGCGTGAGCTGCAACGCGACATGGAGACGTCGCGCGCGGCGCGGCAGGGGCTGGAGCC TCGCGGCGTCATCCACGCGGACCTCTTCATGGACAACGTGAAGTGGCTGGGGGACCGCGTGGGCGCCTTCTTCGACTTCG AGATGGCGTGCCGGGAGGACTACGGCCTGGACGTGGCCATCACGCTCAATGCCTGGTGCTTCGACGGCGGGCAGTACCTG CCGGAGCTGTGCCGGGCCTTCATTCGCGGCTACGTGGACGTCCGGCCGCTATCCGCCGTGGAGCGCACGAACCTCTTCGG CCATGCGCTCTACGGGGCGGTGCGCTTCACGGCGAGCCGCATCCGCGACTACCACCTGTCCCCGCTGCCTGCGGACAAGC TGGTGCGCAAGGACTACCGCACCTACCTCAACCGGGCCCGGGCATTGAATGCCATGGGGCCCGAGGGCTTCGCCGCGCTG TTGGGCCTGTGA
Upstream 100 bases:
>100_bases GCCGTTGTGCCGGGTATAGAAGCCGCGCTCAGATAGGAACGGTCCCCTCGACTGTCAACGGGGGGCGGCGGCGTGAACAC GGACGTGGGAGGTCAGAGGT
Downstream 100 bases:
>100_bases GGGCCCGACGGAGTCAGATGCCGGTGAGGATCTTCCAGGTGCCGTCTTCCTTGCGCAGCACCATCTGCTCCAGCTCGGAC TCCTTCATCGGGCGCGAGTG
Product: putative homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAVHTALPREAFERVAEAFGLGAVREVTPIPQGSINTNHRVETQSGRYFVRHTTVRSADDLRFESALLAHLAAYHFPGPV QVTTRDGATFLELEGGRVSVFRWLPGEELRHPALTADHLERLGAELGKLHRDTQSFSGSRENPYGPETVSGWLEALVAHP DAELAAVARELQRDMETSRAARQGLEPRGVIHADLFMDNVKWLGDRVGAFFDFEMACREDYGLDVAITLNAWCFDGGQYL PELCRAFIRGYVDVRPLSAVERTNLFGHALYGAVRFTASRIRDYHLSPLPADKLVRKDYRTYLNRARALNAMGPEGFAAL LGL
Sequences:
>Translated_323_residues MAVHTALPREAFERVAEAFGLGAVREVTPIPQGSINTNHRVETQSGRYFVRHTTVRSADDLRFESALLAHLAAYHFPGPV QVTTRDGATFLELEGGRVSVFRWLPGEELRHPALTADHLERLGAELGKLHRDTQSFSGSRENPYGPETVSGWLEALVAHP DAELAAVARELQRDMETSRAARQGLEPRGVIHADLFMDNVKWLGDRVGAFFDFEMACREDYGLDVAITLNAWCFDGGQYL PELCRAFIRGYVDVRPLSAVERTNLFGHALYGAVRFTASRIRDYHLSPLPADKLVRKDYRTYLNRARALNAMGPEGFAAL LGL >Mature_322_residues AVHTALPREAFERVAEAFGLGAVREVTPIPQGSINTNHRVETQSGRYFVRHTTVRSADDLRFESALLAHLAAYHFPGPVQ VTTRDGATFLELEGGRVSVFRWLPGEELRHPALTADHLERLGAELGKLHRDTQSFSGSRENPYGPETVSGWLEALVAHPD AELAAVARELQRDMETSRAARQGLEPRGVIHADLFMDNVKWLGDRVGAFFDFEMACREDYGLDVAITLNAWCFDGGQYLP ELCRAFIRGYVDVRPLSAVERTNLFGHALYGAVRFTASRIRDYHLSPLPADKLVRKDYRTYLNRARALNAMGPEGFAALL GL
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 36018; Mature: 35887
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHTALPREAFERVAEAFGLGAVREVTPIPQGSINTNHRVETQSGRYFVRHTTVRSADD CCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHH LRFESALLAHLAAYHFPGPVQVTTRDGATFLELEGGRVSVFRWLPGEELRHPALTADHLE HHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEECCCHHHCCCCCCHHHHH RLGAELGKLHRDTQSFSGSRENPYGPETVSGWLEALVAHPDAELAAVARELQRDMETSRA HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ARQGLEPRGVIHADLFMDNVKWLGDRVGAFFDFEMACREDYGLDVAITLNAWCFDGGQYL HHHCCCCCCEEEHHHHHHHHHHHHHHHCHHCCHHHHHHHCCCCEEEEEEEEEEECCHHHH PELCRAFIRGYVDVRPLSAVERTNLFGHALYGAVRFTASRIRDYHLSPLPADKLVRKDYR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TYLNRARALNAMGPEGFAALLGL HHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure AVHTALPREAFERVAEAFGLGAVREVTPIPQGSINTNHRVETQSGRYFVRHTTVRSADD CCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHH LRFESALLAHLAAYHFPGPVQVTTRDGATFLELEGGRVSVFRWLPGEELRHPALTADHLE HHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEECCCHHHCCCCCCHHHHH RLGAELGKLHRDTQSFSGSRENPYGPETVSGWLEALVAHPDAELAAVARELQRDMETSRA HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ARQGLEPRGVIHADLFMDNVKWLGDRVGAFFDFEMACREDYGLDVAITLNAWCFDGGQYL HHHCCCCCCEEEHHHHHHHHHHHHHHHCHHCCHHHHHHHCCCCEEEEEEEEEEECCHHHH PELCRAFIRGYVDVRPLSAVERTNLFGHALYGAVRFTASRIRDYHLSPLPADKLVRKDYR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TYLNRARALNAMGPEGFAALLGL HHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA