| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is gpmA [H]
Identifier: 108762943
GI number: 108762943
Start: 6878826
End: 6879434
Strand: Direct
Name: gpmA [H]
Synonym: MXAN_5529
Alternate gene names: 108762943
Gene position: 6878826-6879434 (Clockwise)
Preceding gene: 108761882
Following gene: 108760376
Centisome position: 75.26
GC content: 68.14
Gene sequence:
>609_bases ATGCCTACCCTCGTCCTGGTCCGACACGGTCAGTCGCTGTGGAATCAAGAGAACCGCTTCACCGGCCTCGTCGACGTCCC CCTCACCGACCAGGGGCGCCAGGAGGCCCGGCGCGCGGCGGAGGCGCTGAGCGGGATGACGTTCGACGTCGCCTATACGT CAGCGCTCATCCGGGCGCAGGAGACGCTGTCCATCCTCTTGGACGCGTTGGGACAGCAGGTCCCCACCATCCGGGACGCC GCCCTCAACGAGCGCAACTACGGCGACCTGCAGGGGCTCAACAAGGCGGACGCCGCGAAGCGTTGGGGGGCCGCGCAAAT CAAGGAGTGGCGCCGCTCCTTCGACGTGCCGCCCCCCAACGGCGAGTCCCTGGAGATGACAGCGGAGCGCGTGTTGCCGT TCTATGAGCGCGCCATCGCCGGAGACCTGCGCCTGGGGAAGAACGTGCTGGTGGTGGCCCACGGCAACTCCAACCGTTCC CTGGTGATGAAGCTGGACAACCTCACGGGGGAGCAGGTGGTGGGGCTGGAGCTGGCCACCGGGGTGCCGCTCATCTACGA GATGTCGCCGGACGGAGAGGTGCTGTCCAAGCGCACCGCGTCCCCCTGA
Upstream 100 bases:
>100_bases AGCCTGAACGAAGCGCGAGACTGTGGAGCCTGGAACGCCCGGCCCCGGGTGGACGCGTACACCCCTGGCCGCCCCAGGGC TTCTGAATTACCTGAAGGCC
Downstream 100 bases:
>100_bases CTCAGGTGAAGGCACAGGGGGCTACCCATCCCCCTGGAGTCATGGGATACGCACGGCGGCGCGAGGACGGCTCAGGCCGC TCCAGGGGGAACTTCCGTGG
Product: putative 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPTLVLVRHGQSLWNQENRFTGLVDVPLTDQGRQEARRAAEALSGMTFDVAYTSALIRAQETLSILLDALGQQVPTIRDA ALNERNYGDLQGLNKADAAKRWGAAQIKEWRRSFDVPPPNGESLEMTAERVLPFYERAIAGDLRLGKNVLVVAHGNSNRS LVMKLDNLTGEQVVGLELATGVPLIYEMSPDGEVLSKRTASP
Sequences:
>Translated_202_residues MPTLVLVRHGQSLWNQENRFTGLVDVPLTDQGRQEARRAAEALSGMTFDVAYTSALIRAQETLSILLDALGQQVPTIRDA ALNERNYGDLQGLNKADAAKRWGAAQIKEWRRSFDVPPPNGESLEMTAERVLPFYERAIAGDLRLGKNVLVVAHGNSNRS LVMKLDNLTGEQVVGLELATGVPLIYEMSPDGEVLSKRTASP >Mature_201_residues PTLVLVRHGQSLWNQENRFTGLVDVPLTDQGRQEARRAAEALSGMTFDVAYTSALIRAQETLSILLDALGQQVPTIRDAA LNERNYGDLQGLNKADAAKRWGAAQIKEWRRSFDVPPPNGESLEMTAERVLPFYERAIAGDLRLGKNVLVVAHGNSNRSL VMKLDNLTGEQVVGLELATGVPLIYEMSPDGEVLSKRTASP
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=218, Percent_Identity=42.2018348623853, Blast_Score=178, Evalue=3e-45, Organism=Homo sapiens, GI4505753, Length=218, Percent_Identity=42.6605504587156, Blast_Score=166, Evalue=9e-42, Organism=Homo sapiens, GI71274132, Length=218, Percent_Identity=39.9082568807339, Blast_Score=152, Evalue=1e-37, Organism=Homo sapiens, GI4502445, Length=217, Percent_Identity=35.9447004608295, Blast_Score=144, Evalue=6e-35, Organism=Homo sapiens, GI40353764, Length=217, Percent_Identity=35.9447004608295, Blast_Score=144, Evalue=6e-35, Organism=Homo sapiens, GI310129614, Length=116, Percent_Identity=51.7241379310345, Blast_Score=118, Evalue=3e-27, Organism=Escherichia coli, GI1786970, Length=222, Percent_Identity=43.2432432432432, Blast_Score=177, Evalue=5e-46, Organism=Escherichia coli, GI1786857, Length=184, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1790856, Length=160, Percent_Identity=31.875, Blast_Score=63, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322697, Length=216, Percent_Identity=43.0555555555556, Blast_Score=167, Evalue=9e-43, Organism=Saccharomyces cerevisiae, GI6320183, Length=269, Percent_Identity=25.2788104089219, Blast_Score=92, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6324516, Length=265, Percent_Identity=24.9056603773585, Blast_Score=92, Evalue=8e-20, Organism=Drosophila melanogaster, GI85725270, Length=216, Percent_Identity=42.1296296296296, Blast_Score=171, Evalue=4e-43, Organism=Drosophila melanogaster, GI85725272, Length=216, Percent_Identity=42.1296296296296, Blast_Score=171, Evalue=4e-43, Organism=Drosophila melanogaster, GI24650981, Length=216, Percent_Identity=42.1296296296296, Blast_Score=171, Evalue=4e-43, Organism=Drosophila melanogaster, GI24646216, Length=216, Percent_Identity=40.7407407407407, Blast_Score=170, Evalue=5e-43, Organism=Drosophila melanogaster, GI28571815, Length=216, Percent_Identity=34.7222222222222, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI28571817, Length=216, Percent_Identity=34.7222222222222, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI24648979, Length=216, Percent_Identity=34.7222222222222, Blast_Score=118, Evalue=3e-27,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 22166; Mature: 22035
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLVLVRHGQSLWNQENRFTGLVDVPLTDQGRQEARRAAEALSGMTFDVAYTSALIRAQ CCEEEEEECCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHH ETLSILLDALGQQVPTIRDAALNERNYGDLQGLNKADAAKRWGAAQIKEWRRSFDVPPPN HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCC GESLEMTAERVLPFYERAIAGDLRLGKNVLVVAHGNSNRSLVMKLDNLTGEQVVGLELAT CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECC GVPLIYEMSPDGEVLSKRTASP CCCEEEEECCCHHHHHHCCCCC >Mature Secondary Structure PTLVLVRHGQSLWNQENRFTGLVDVPLTDQGRQEARRAAEALSGMTFDVAYTSALIRAQ CEEEEEECCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHH ETLSILLDALGQQVPTIRDAALNERNYGDLQGLNKADAAKRWGAAQIKEWRRSFDVPPPN HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCC GESLEMTAERVLPFYERAIAGDLRLGKNVLVVAHGNSNRSLVMKLDNLTGEQVVGLELAT CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEEECC GVPLIYEMSPDGEVLSKRTASP CCCEEEEECCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA