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The map label for this gene is gspD [C]

Identifier: 108762925

GI number: 108762925

Start: 3639440

End: 3640888

Strand: Direct

Name: gspD [C]

Synonym: MXAN_3106

Alternate gene names: 108762925

Gene position: 3639440-3640888 (Clockwise)

Preceding gene: 108758056

Following gene: 108762982

Centisome position: 39.82

GC content: 64.32

Gene sequence:

>1449_bases
ATGTTCACACGCATCACGCATGCCGCGGCGCTAGGCGCCCTCATCGCACTGGTGGCGGGCGGCAGCGCCCTGGCGCAGGA
TGGCACCACCGTCAGCCTCGGCGTGGGTTCCCAGAAGGTGATCACCATCCCTGGTCTCAGCCGCGTGGCGCTCGGTGATC
CGAGCGTCGCCGAGGTGAAGACGCTCGGCTCCGGCCAGCTGCTCATCACCGGTCAGGCTGAAGGCAAGACGACGCTGCTC
GTCTGGAAGTCCTCGGGCCAGCGCGTCAGCTACCTGGTGGCGGTGCGCAAGCAGGACCCCAACGAGGTCATCTCCGAAAT
CAAGCGCTTGCTGGGTGAGATTGAAGGCGTCTCCGTCCGCATGGTGGGTGATCGCATCTACCTGGACGGTCAGGCCTACA
CCACGCAGGACGCCGACCGCATCGAGCAGGTGGTGGGCCTCTACCCGAACGTGAAGTCGTTCGTGAAGATTGCCCCCAAC
GCCAAGAAGCTGGTGGCCCAGAACCTCAATGCGGCCTTCCAGAAGGCGGGCCTGAAGAACGTCCAGGCCAACGTGGTGGG
CGCCACCATCTTCCTGGAGGGCTCCGTGGAGAGCCAGCAGGATCTCCAGAAGGCGGAGCTCATCACCAAGGCCATCGGTG
AGAAGGTGGAGAACCTCCTCGTCGTCGGCATCAAGCGGATGATCCTCTCCGAGGTCCAGTTCGTCGAAATCCGCCGCAAC
AGCCGAGACCGCTACGGCATCCGCTACCCGACGGACATCACGGGGACCGCGACGGCCATCGCCAGCATCTCCCAGGAGCT
CTTCCCGGGCACCTTCGGCTCCGGCGTTTCCACGCTCACCCTCAACGCGAACGCGGACTTCTCCTTCGGCTTCCAGGGCA
ACGACGGTTACGGCCGTCTGCTCGCGCAGCCCAAGCTGGTGTGCGCCAGCGGTGAGAAGGCGGAGTTCCTCGCCGGTGGC
GAGGTTCCCATCCCGCTCATCACGAACAACCAGTTCACGGTGGAGTTCAAGAAGTACGGCGTCATCCTGAACCTGCGCCC
CACCGCGGACCGCAACGGCAACATCCAGACGGAGATCGAGGCGGAGGCCTCCGAAATCGACACCTCCGTGGCGGTGTCCT
TCGGTGGTTCGGCCTCCATCCCCGGCTTCCGGACCCGGAAGGTGAAGACGAACGTCACCGTGCGCCACGGTGAGACCATC
GTCCTGTCCGGCGTGTTCAGCCACGACGAGCAGAAGTCCGTGTCGAAGCTCCCCGGCCTGGGTCACATCCCGATCATCGG
TGAGCTCTTCAAGAGCCGCGGTTTCGACTCCACCAAGCGCGAGCTGGTCATCTTCGTCACCCCGCGCATCGTCAACCCGG
ACTCCGACAAGGTCCGCACCATCATCGAGGACGTGAAGAGCCGCTACAAGCAGGCCCGGTCCGAGGTGAACTTCAACATC
TTCGACTGA

Upstream 100 bases:

>100_bases
ATGGAGTGGCCATCGCGCTCGGCACCGTCTGGGCGCTGTGGTGGCAGCACGGAACGTTGGGTTAGCTCGGACTTCTGGAA
GAGAAGAGGGGACACGGACG

Downstream 100 bases:

>100_bases
GGTGGGCGCCCCTGGGGCGCCGCCTGAGACGGGCCTTTGAGGCCCACGGCACGGGCCGGCTTCTCCCCTTCCGGGGGCGG
ATGCCGGCCCGTCGCCTTGC

Product: outer membrane secretin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MFTRITHAAALGALIALVAGGSALAQDGTTVSLGVGSQKVITIPGLSRVALGDPSVAEVKTLGSGQLLITGQAEGKTTLL
VWKSSGQRVSYLVAVRKQDPNEVISEIKRLLGEIEGVSVRMVGDRIYLDGQAYTTQDADRIEQVVGLYPNVKSFVKIAPN
AKKLVAQNLNAAFQKAGLKNVQANVVGATIFLEGSVESQQDLQKAELITKAIGEKVENLLVVGIKRMILSEVQFVEIRRN
SRDRYGIRYPTDITGTATAIASISQELFPGTFGSGVSTLTLNANADFSFGFQGNDGYGRLLAQPKLVCASGEKAEFLAGG
EVPIPLITNNQFTVEFKKYGVILNLRPTADRNGNIQTEIEAEASEIDTSVAVSFGGSASIPGFRTRKVKTNVTVRHGETI
VLSGVFSHDEQKSVSKLPGLGHIPIIGELFKSRGFDSTKRELVIFVTPRIVNPDSDKVRTIIEDVKSRYKQARSEVNFNI
FD

Sequences:

>Translated_482_residues
MFTRITHAAALGALIALVAGGSALAQDGTTVSLGVGSQKVITIPGLSRVALGDPSVAEVKTLGSGQLLITGQAEGKTTLL
VWKSSGQRVSYLVAVRKQDPNEVISEIKRLLGEIEGVSVRMVGDRIYLDGQAYTTQDADRIEQVVGLYPNVKSFVKIAPN
AKKLVAQNLNAAFQKAGLKNVQANVVGATIFLEGSVESQQDLQKAELITKAIGEKVENLLVVGIKRMILSEVQFVEIRRN
SRDRYGIRYPTDITGTATAIASISQELFPGTFGSGVSTLTLNANADFSFGFQGNDGYGRLLAQPKLVCASGEKAEFLAGG
EVPIPLITNNQFTVEFKKYGVILNLRPTADRNGNIQTEIEAEASEIDTSVAVSFGGSASIPGFRTRKVKTNVTVRHGETI
VLSGVFSHDEQKSVSKLPGLGHIPIIGELFKSRGFDSTKRELVIFVTPRIVNPDSDKVRTIIEDVKSRYKQARSEVNFNI
FD
>Mature_482_residues
MFTRITHAAALGALIALVAGGSALAQDGTTVSLGVGSQKVITIPGLSRVALGDPSVAEVKTLGSGQLLITGQAEGKTTLL
VWKSSGQRVSYLVAVRKQDPNEVISEIKRLLGEIEGVSVRMVGDRIYLDGQAYTTQDADRIEQVVGLYPNVKSFVKIAPN
AKKLVAQNLNAAFQKAGLKNVQANVVGATIFLEGSVESQQDLQKAELITKAIGEKVENLLVVGIKRMILSEVQFVEIRRN
SRDRYGIRYPTDITGTATAIASISQELFPGTFGSGVSTLTLNANADFSFGFQGNDGYGRLLAQPKLVCASGEKAEFLAGG
EVPIPLITNNQFTVEFKKYGVILNLRPTADRNGNIQTEIEAEASEIDTSVAVSFGGSASIPGFRTRKVKTNVTVRHGETI
VLSGVFSHDEQKSVSKLPGLGHIPIIGELFKSRGFDSTKRELVIFVTPRIVNPDSDKVRTIIEDVKSRYKQARSEVNFNI
FD

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI87082242, Length=215, Percent_Identity=31.1627906976744, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1789793, Length=240, Percent_Identity=25, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 51882; Mature: 51882

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTRITHAAALGALIALVAGGSALAQDGTTVSLGVGSQKVITIPGLSRVALGDPSVAEVK
CCCCHHHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCCEEEECCCCCEEECCCCCHHHHE
TLGSGQLLITGQAEGKTTLLVWKSSGQRVSYLVAVRKQDPNEVISEIKRLLGEIEGVSVR
ECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEE
MVGDRIYLDGQAYTTQDADRIEQVVGLYPNVKSFVKIAPNAKKLVAQNLNAAFQKAGLKN
EECCEEEECCCEECCCCHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHHHHHHHCCCCC
VQANVVGATIFLEGSVESQQDLQKAELITKAIGEKVENLLVVGIKRMILSEVQFVEIRRN
CEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
SRDRYGIRYPTDITGTATAIASISQELFPGTFGSGVSTLTLNANADFSFGFQGNDGYGRL
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCEE
LAQPKLVCASGEKAEFLAGGEVPIPLITNNQFTVEFKKYGVILNLRPTADRNGNIQTEIE
ECCCEEEEECCCCCEEEECCCCCEEEEECCEEEEEEEEEEEEEEEECCCCCCCCEEEEEE
AEASEIDTSVAVSFGGSASIPGFRTRKVKTNVTVRHGETIVLSGVFSHDEQKSVSKLPGL
CCHHHCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEEEECCCCHHHHHHHCCCC
GHIPIIGELFKSRGFDSTKRELVIFVTPRIVNPDSDKVRTIIEDVKSRYKQARSEVNFNI
CCCCHHHHHHHHCCCCCCCCEEEEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE
FD
CC
>Mature Secondary Structure
MFTRITHAAALGALIALVAGGSALAQDGTTVSLGVGSQKVITIPGLSRVALGDPSVAEVK
CCCCHHHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCCEEEECCCCCEEECCCCCHHHHE
TLGSGQLLITGQAEGKTTLLVWKSSGQRVSYLVAVRKQDPNEVISEIKRLLGEIEGVSVR
ECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEE
MVGDRIYLDGQAYTTQDADRIEQVVGLYPNVKSFVKIAPNAKKLVAQNLNAAFQKAGLKN
EECCEEEECCCEECCCCHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHHHHHHHCCCCC
VQANVVGATIFLEGSVESQQDLQKAELITKAIGEKVENLLVVGIKRMILSEVQFVEIRRN
CEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
SRDRYGIRYPTDITGTATAIASISQELFPGTFGSGVSTLTLNANADFSFGFQGNDGYGRL
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCEE
LAQPKLVCASGEKAEFLAGGEVPIPLITNNQFTVEFKKYGVILNLRPTADRNGNIQTEIE
ECCCEEEEECCCCCEEEECCCCCEEEEECCEEEEEEEEEEEEEEEECCCCCCCCEEEEEE
AEASEIDTSVAVSFGGSASIPGFRTRKVKTNVTVRHGETIVLSGVFSHDEQKSVSKLPGL
CCHHHCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEEEECCCCHHHHHHHCCCC
GHIPIIGELFKSRGFDSTKRELVIFVTPRIVNPDSDKVRTIIEDVKSRYKQARSEVNFNI
CCCCHHHHHHHHCCCCCCCCEEEEEEECEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE
FD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]