| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is iaaA [H]
Identifier: 108762857
GI number: 108762857
Start: 1350467
End: 1351522
Strand: Direct
Name: iaaA [H]
Synonym: MXAN_1160
Alternate gene names: 108762857
Gene position: 1350467-1351522 (Clockwise)
Preceding gene: 108757287
Following gene: 108758831
Centisome position: 14.78
GC content: 70.55
Gene sequence:
>1056_bases GTGGGCTGTGCCACCCAGACTGGGGCTGCTCGCACCGACAGCGAGCAGCCCACCTCGCGTGATGCACCCGCGCCCAAGCC GAAGTGGGGGCTGGTCATCCACGGCGGCGCGGGTGTCATCTCCCGGGAGAATCTCTCCCCAGAGCGCGAGGAGGAGGTCC GCGCCGCGCTGACCCAGTCCCTCCAGGCGGGACACGCGGTGTTGGCCAGTGGTGGCTCCGCGCTGGACGCAGTGAGCGCC GCGGTCCGCATCCTGGAGGACTCTCCGTACTTCAACGCGGGCAAGGGCGCCGTCTTCACGCACGACGGGGTCAACGAGCT GGATGCCGCCATCATGGATGGCACGACGCGCAAGGCGGGGGCCGTGGCGGGCTTGCGGCACGTGAAGAACCCCATCTCGC TGGCGCGGCTCGTCATGGAGCAGTCGCCGCACGTGATGATGGTGGGGGAGGGCGCGGAGGCCTTCGCGAAGTCGCAGGGT GTGGAGTTGGTGGACCCGAAGTACTTCTACACGGAGGACCGGTGGCAGGGCCTCCAGCGCGCGCTGGAGAAGGAGCGCTC GCAGCCGCAGCCATCCTCCGCGCTCCCGGCGGGGTATGACCCGGTGAGCGGGGACCACAAGTTCGGCACCGTGGGCGCCG TGGCCCTGGACCAGACGGGCGCGCTCGCCGCGGCCACGTCCACGGGAGGCATGACGAACAAGCGCTACGGCCGCGTGGGG GACTCGCCCATCATCGGCGCGGGGACGTATGCGGACGCGCGCTGCGCCGTGTCCGCCACCGGCCATGGCGAGTTCTTCAT TCGCTACACCGTGGCGCGCGACATCTGCGCCCGCGTGGAATACCAGAACGTGCCGTTGCCGGAGGCCGCCGACGTCGTCA TCAACGACGTGCTGGTGAAGGTCGGCGGCGAGGGCGGCGTCATCGCGATGGACCGCGAGGGCAACGTGGCCATGCCCTTC AACTCCGCCGGCATGTACCGCGGCTACGTGGGCGAGGACGGCAAGCCCGTCGTGGCCATCTTCCGGGATGCGGCGGAGGC CGCTGGCGCGAAGTAG
Upstream 100 bases:
>100_bases GTGCTACCGACGGAGCGCTCTGGAGGTCCTTCGAATGTCCGCCGCTTCCGTTCTCCTCCGCCGTTCTTTCGTCGTGGGTG CCGTGATGCTGCTTTCTCCC
Downstream 100 bases:
>100_bases CAGCGCACGGAGGCCACCATCCGGGATGCGCCCGGGGGGCCTCCCCGAGCGCGCCGTGAGGCGTCAGTCCCGGCCGCCGC GATGTCCCCCATCGCGGCGG
Product: asparaginase family protein
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MGCATQTGAARTDSEQPTSRDAPAPKPKWGLVIHGGAGVISRENLSPEREEEVRAALTQSLQAGHAVLASGGSALDAVSA AVRILEDSPYFNAGKGAVFTHDGVNELDAAIMDGTTRKAGAVAGLRHVKNPISLARLVMEQSPHVMMVGEGAEAFAKSQG VELVDPKYFYTEDRWQGLQRALEKERSQPQPSSALPAGYDPVSGDHKFGTVGAVALDQTGALAAATSTGGMTNKRYGRVG DSPIIGAGTYADARCAVSATGHGEFFIRYTVARDICARVEYQNVPLPEAADVVINDVLVKVGGEGGVIAMDREGNVAMPF NSAGMYRGYVGEDGKPVVAIFRDAAEAAGAK
Sequences:
>Translated_351_residues MGCATQTGAARTDSEQPTSRDAPAPKPKWGLVIHGGAGVISRENLSPEREEEVRAALTQSLQAGHAVLASGGSALDAVSA AVRILEDSPYFNAGKGAVFTHDGVNELDAAIMDGTTRKAGAVAGLRHVKNPISLARLVMEQSPHVMMVGEGAEAFAKSQG VELVDPKYFYTEDRWQGLQRALEKERSQPQPSSALPAGYDPVSGDHKFGTVGAVALDQTGALAAATSTGGMTNKRYGRVG DSPIIGAGTYADARCAVSATGHGEFFIRYTVARDICARVEYQNVPLPEAADVVINDVLVKVGGEGGVIAMDREGNVAMPF NSAGMYRGYVGEDGKPVVAIFRDAAEAAGAK >Mature_350_residues GCATQTGAARTDSEQPTSRDAPAPKPKWGLVIHGGAGVISRENLSPEREEEVRAALTQSLQAGHAVLASGGSALDAVSAA VRILEDSPYFNAGKGAVFTHDGVNELDAAIMDGTTRKAGAVAGLRHVKNPISLARLVMEQSPHVMMVGEGAEAFAKSQGV ELVDPKYFYTEDRWQGLQRALEKERSQPQPSSALPAGYDPVSGDHKFGTVGAVALDQTGALAAATSTGGMTNKRYGRVGD SPIIGAGTYADARCAVSATGHGEFFIRYTVARDICARVEYQNVPLPEAADVVINDVLVKVGGEGGVIAMDREGNVAMPFN SAGMYRGYVGEDGKPVVAIFRDAAEAAGAK
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=297, Percent_Identity=42.0875420875421, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI145275200, Length=297, Percent_Identity=42.0875420875421, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI98991769, Length=295, Percent_Identity=30.8474576271186, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI285002251, Length=219, Percent_Identity=37.4429223744292, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI285002253, Length=219, Percent_Identity=35.1598173515982, Blast_Score=91, Evalue=1e-18, Organism=Escherichia coli, GI1787050, Length=316, Percent_Identity=53.1645569620253, Blast_Score=306, Evalue=2e-84, Organism=Caenorhabditis elegans, GI17569239, Length=241, Percent_Identity=28.2157676348548, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI18921183, Length=325, Percent_Identity=38.7692307692308, Blast_Score=187, Evalue=8e-48, Organism=Drosophila melanogaster, GI21357893, Length=277, Percent_Identity=32.8519855595668, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI221330102, Length=240, Percent_Identity=35.4166666666667, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24652135, Length=240, Percent_Identity=35.4166666666667, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24655553, Length=264, Percent_Identity=29.1666666666667, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24657358, Length=235, Percent_Identity=30.2127659574468, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 36601; Mature: 36470
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCATQTGAARTDSEQPTSRDAPAPKPKWGLVIHGGAGVISRENLSPEREEEVRAALTQS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHH LQAGHAVLASGGSALDAVSAAVRILEDSPYFNAGKGAVFTHDGVNELDAAIMDGTTRKAG HHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCHHH AVAGLRHVKNPISLARLVMEQSPHVMMVGEGAEAFAKSQGVELVDPKYFYTEDRWQGLQR HHHHHHHHCCHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEECCCEEECCHHHHHHHH ALEKERSQPQPSSALPAGYDPVSGDHKFGTVGAVALDQTGALAAATSTGGMTNKRYGRVG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCC DSPIIGAGTYADARCAVSATGHGEFFIRYTVARDICARVEYQNVPLPEAADVVINDVLVK CCCEECCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEE VGGEGGVIAMDREGNVAMPFNSAGMYRGYVGEDGKPVVAIFRDAAEAAGAK ECCCCCEEEEECCCCEEECCCCCCCEECCCCCCCCEEEEEEHHHHHHCCCC >Mature Secondary Structure GCATQTGAARTDSEQPTSRDAPAPKPKWGLVIHGGAGVISRENLSPEREEEVRAALTQS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHH LQAGHAVLASGGSALDAVSAAVRILEDSPYFNAGKGAVFTHDGVNELDAAIMDGTTRKAG HHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCHHH AVAGLRHVKNPISLARLVMEQSPHVMMVGEGAEAFAKSQGVELVDPKYFYTEDRWQGLQR HHHHHHHHCCHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEECCCEEECCHHHHHHHH ALEKERSQPQPSSALPAGYDPVSGDHKFGTVGAVALDQTGALAAATSTGGMTNKRYGRVG HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCC DSPIIGAGTYADARCAVSATGHGEFFIRYTVARDICARVEYQNVPLPEAADVVINDVLVK CCCEECCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEE VGGEGGVIAMDREGNVAMPFNSAGMYRGYVGEDGKPVVAIFRDAAEAAGAK ECCCCCEEEEECCCCEEECCCCCCCEECCCCCCCCEEEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]