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The map label for this gene is 108762854

Identifier: 108762854

GI number: 108762854

Start: 75585

End: 76625

Strand: Direct

Name: 108762854

Synonym: MXAN_0068

Alternate gene names: NA

Gene position: 75585-76625 (Clockwise)

Preceding gene: 108762656

Following gene: 108763383

Centisome position: 0.83

GC content: 70.99

Gene sequence:

>1041_bases
TTGGCGACTTCCTGGCGCGGTTGCTCGCCGAGCCGTCGTGCTGGCCGGGTGGAAACGGGGGGAGGGAACGGGGTAACAAG
GCGGGTGAGCCGTGCCGTTCCAGGCACGCGCGGTGCCGAGGTGCGCATGCGAACGCAGCAGAGCCGCTCGCTCGTCTTCC
TCCAGCAGCTCGGCTCCGGGACACGCGAGGGCTACGAGGCCCTGTCCGGACTGGAGGACACGCTGGTCGCGCTCTGCGCC
GCGGCGCGGCAGGCCTGGCCGGGCGTGACGCTGGCGGAGGAAGACTTCCTACGCCACCTTGCTTCGTGCCTGCCACGGGA
CGAGGACCCCTCACGGGTGCTGGCCTCCGTGCATGCCGCGGACCTCTATCTGGCGTGCGCCTGTGTGCGGGGGAACGCCG
CGGCGCATGTCGCGCTGGAGCGCCACGTTCTTCCCAAGGCGGCGGCGTCCTTGGCTCGGATGCGGGACACGGGTGTGGAC
CCCTCCGAGGTGGTTCAACACCTGCGCGAGCGGCTGCTCGTCCCAGAAGGTGACCGGCCCGCACGCATGGCGGAATACCT
GGGCAGTGGTCCGCTCGCGGCTTGGTTGCGCGCGGCAGCGGTGCGCACCGCCCTCAACCTCCAGCGCTCGGAGCGCCGGA
GGGCCCACGCCGAAGAGGAGGCGGAGGCGCTCCCGCTGCCAACCCATGCGGGCATGGCGGACGTCGAGTTGGACTACCTG
CGCAAGAACCACCGCGAGCATTTCCAGGCGGCGCTCTCCGAGGCACTGAATGCCCTGCCCACGCGGGAGCGCACCGTGCT
GCGCTTGCACGTGGTGGAGGGGCTGAGCCTGGAGCGCATCGGCACCATGTACCAGACGCACAAGTCCACCGTGTCGCGCT
GGGTGGCCCGTGCCCGGGAAGCGGCGCTGGAGGGCACACGTCAGCGGCTGGCGGAGCGGCTTCGGCTCACCTCCGGCGAA
CTGCACAGCCTGATGCGGGTGGTACAGGGAGAGCTGGACCTGAGCCTGCCGTCCCTGCTGAGCAGCCCTGGGGCTTCCTG
A

Upstream 100 bases:

>100_bases
CGCCGCGTCCGGTCCTTCGTGTGCGAGCACAGGGGGGAGCGGGGAGCCTTGTGGCGGGTGTGGCCGCCCGCGCGCCCCAC
GCCGCCCAAGTTAAAGGCCC

Downstream 100 bases:

>100_bases
GGGTCCGCGGACTTTTTTCGCGGCCGCGTGCAACGCTCCGACCTGGCCGGTGTCATCCGGGTGAAGGTGGAACAACCCCC
TCTTGGAGGACACACACCAT

Product: putative DNA-binding regulatory protein

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MATSWRGCSPSRRAGRVETGGGNGVTRRVSRAVPGTRGAEVRMRTQQSRSLVFLQQLGSGTREGYEALSGLEDTLVALCA
AARQAWPGVTLAEEDFLRHLASCLPRDEDPSRVLASVHAADLYLACACVRGNAAAHVALERHVLPKAAASLARMRDTGVD
PSEVVQHLRERLLVPEGDRPARMAEYLGSGPLAAWLRAAAVRTALNLQRSERRRAHAEEEAEALPLPTHAGMADVELDYL
RKNHREHFQAALSEALNALPTRERTVLRLHVVEGLSLERIGTMYQTHKSTVSRWVARAREAALEGTRQRLAERLRLTSGE
LHSLMRVVQGELDLSLPSLLSSPGAS

Sequences:

>Translated_346_residues
MATSWRGCSPSRRAGRVETGGGNGVTRRVSRAVPGTRGAEVRMRTQQSRSLVFLQQLGSGTREGYEALSGLEDTLVALCA
AARQAWPGVTLAEEDFLRHLASCLPRDEDPSRVLASVHAADLYLACACVRGNAAAHVALERHVLPKAAASLARMRDTGVD
PSEVVQHLRERLLVPEGDRPARMAEYLGSGPLAAWLRAAAVRTALNLQRSERRRAHAEEEAEALPLPTHAGMADVELDYL
RKNHREHFQAALSEALNALPTRERTVLRLHVVEGLSLERIGTMYQTHKSTVSRWVARAREAALEGTRQRLAERLRLTSGE
LHSLMRVVQGELDLSLPSLLSSPGAS
>Mature_345_residues
ATSWRGCSPSRRAGRVETGGGNGVTRRVSRAVPGTRGAEVRMRTQQSRSLVFLQQLGSGTREGYEALSGLEDTLVALCAA
ARQAWPGVTLAEEDFLRHLASCLPRDEDPSRVLASVHAADLYLACACVRGNAAAHVALERHVLPKAAASLARMRDTGVDP
SEVVQHLRERLLVPEGDRPARMAEYLGSGPLAAWLRAAAVRTALNLQRSERRRAHAEEEAEALPLPTHAGMADVELDYLR
KNHREHFQAALSEALNALPTRERTVLRLHVVEGLSLERIGTMYQTHKSTVSRWVARAREAALEGTRQRLAERLRLTSGEL
HSLMRVVQGELDLSLPSLLSSPGAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37807; Mature: 37675

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSWRGCSPSRRAGRVETGGGNGVTRRVSRAVPGTRGAEVRMRTQQSRSLVFLQQLGSG
CCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
TREGYEALSGLEDTLVALCAAARQAWPGVTLAEEDFLRHLASCLPRDEDPSRVLASVHAA
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
DLYLACACVRGNAAAHVALERHVLPKAAASLARMRDTGVDPSEVVQHLRERLLVPEGDRP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCH
ARMAEYLGSGPLAAWLRAAAVRTALNLQRSERRRAHAEEEAEALPLPTHAGMADVELDYL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
RKNHREHFQAALSEALNALPTRERTVLRLHVVEGLSLERIGTMYQTHKSTVSRWVARARE
HHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALEGTRQRLAERLRLTSGELHSLMRVVQGELDLSLPSLLSSPGAS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCC
>Mature Secondary Structure 
ATSWRGCSPSRRAGRVETGGGNGVTRRVSRAVPGTRGAEVRMRTQQSRSLVFLQQLGSG
CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
TREGYEALSGLEDTLVALCAAARQAWPGVTLAEEDFLRHLASCLPRDEDPSRVLASVHAA
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
DLYLACACVRGNAAAHVALERHVLPKAAASLARMRDTGVDPSEVVQHLRERLLVPEGDRP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCH
ARMAEYLGSGPLAAWLRAAAVRTALNLQRSERRRAHAEEEAEALPLPTHAGMADVELDYL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
RKNHREHFQAALSEALNALPTRERTVLRLHVVEGLSLERIGTMYQTHKSTVSRWVARARE
HHHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALEGTRQRLAERLRLTSGELHSLMRVVQGELDLSLPSLLSSPGAS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA