| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pkwA [H]
Identifier: 108762815
GI number: 108762815
Start: 859316
End: 860959
Strand: Direct
Name: pkwA [H]
Synonym: MXAN_0752
Alternate gene names: 108762815
Gene position: 859316-860959 (Clockwise)
Preceding gene: 108759978
Following gene: 108760772
Centisome position: 9.4
GC content: 73.78
Gene sequence:
>1644_bases ATGAAGTTCGCGAGGGGGGCGTTCGCACTGCTGGCGGGCGGGGTGGTGGCGGTAGGGGGTGGTGGCTGTGCACACGCGCC TCCTCGGGTGTCCCCGGAGCTGAGCGCCCGGCTGGAGTCGGAGCCGGGCACCTGGGTGTCCGGTAGCGCCTCGGGCCTTG GGCGCAAGGCCGTCCTCAACAACAAGGACTTCATCTGGGGCCTGGCCTTCGCGCCCCAAGGCGCCCGGGTGGCGTACTCG CGCCTGGGCAGCAAGTCCTACTTCCTCTCCGTCTGGGAGCTGGGCTCCGCCGAGCCGACGATGCTGGCGGACCCGGCCAT CAACCCCTACGAGTTCGACGTGGAGGGCGTGGCCTTCTCCCCGGATGGCACGCGCGTGGCCACCGCGGGCAAGGACAGCG TGGTGCGCCTCTTCGACGCGGCCACCGGCGCGCTCGTGGCGGAGCGCCGCACCGAGGAACCGCTGTCCGTGGTGGCCTTC CACCCGGAGGGGCAGTGGCTGGTGGTGGGCAGCTACAAGGGACTGATGACGGTGTTGTCGGCGCCCGCGCTGGAGTACGG CTCCGAGGAGCGCGGACACCTGGGGCCGGTGACGGCGCTGGCCTTCGCGCCGGACGGGACGCTGTATTCGGGCGGCTGGG ACAAGCACGTGCGGGCCTGGCGCACCTCCGTGGAGGGGCTGCGGCCGGGGCAGGCGCGCATGCGCTTCGAGCGGCGCGCC GGCTCCGTGGTGCTGGGCGGCACGGTGAATGACAAGGCGCCGCTGTCCTTCGCGTTGGATGCGCGCGCGCCCGCGCTGGT GCTCACCAGCGAGGCGGCCGCCGCGGCGGGCATCGACGTGCCCTTCTTGAAGGAGACGGTCAACGTGCCGGGGCCGCTGG GCACCATCGCCGCGCGGCTGGCGCCGGCCCAGTCCCTGCGCTTCAAGTCCATGCGGGTGGAGGGCGTAGACGTCGCCATC TGTGACGCGTGCGTGCCGCAGGGCACCCAGGGCGTGCTGGGCGCGCCCTTCTCCGAACGGGTGGACGTGGCCTTCGACGA AGTCACGCAGGAGGCCGTGCTGTCGCTGAAGGGCGGCCCGCCCGAGGGCGCGGTGACGGTGGACGCGCTGGTGCTCGCGC GGCGCTCGGAGTTTCCCTTCCCGGCCTACGTGAGCGACGTCACCGTGGACGCGCGCGGCCAGAGGCTGGGGGTGGGGCTG TCGGAGCAGAAGCCGGAGCGCGACCGCGGCGTGTACGAGCGCGAGCGCAAGGGCGTGGAGGAGCCGCAGGGCCCCTTCAA CGCGGGCGCGCTGGTGGACGCGCAGTCCGGTCAGGTGCTGGCGAAGTGGCCGGTGCACCGGGGCGTGGTGGCCACCGCGG CCATCTCCCCGGACGGGCGCTCGCTGGCCAGCGGCGGCTGGGACAAGCGCGTGTACCTGTTCACCGAAGGGGACGTGGAC GCGCGCGGCGAGCACCGCTTCGACTGGTCCGTGCGGCGCGTGCGCTTCAGCCCGGATGGGCGCTGGCTGGGCGTGGCCGC GTGGACGCCCCAGGTGGCCAGCCGCGACGGGGACAGCGACCCGGCGGCGGTGCTGCTGGACGTGGGCTATGAATCGCCCA CTGTGCAGGGGCCGGGCACGGCCGGCGCGTCCGTCGCTCCGTAG
Upstream 100 bases:
>100_bases AGCAGCTGTTCCTGTTGTCCATCGACAACAAGGGCGTCACGGAAATCAACGTCGAGAAGGAGCGGCAGAAGGCCGCCTCG GCGTCAGGAGGCTCAGGGAC
Downstream 100 bases:
>100_bases TCCTCACTCCACCGCTCAGAAGTTGAGGTGGATGTCACCCGCGGGCATGCCGCGGGCCTGGAGCGTCGTCATCACGCCCC GCACCATCTCCTTCTGCCCG
Product: WD domain-/G-beta repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKFARGAFALLAGGVVAVGGGGCAHAPPRVSPELSARLESEPGTWVSGSASGLGRKAVLNNKDFIWGLAFAPQGARVAYS RLGSKSYFLSVWELGSAEPTMLADPAINPYEFDVEGVAFSPDGTRVATAGKDSVVRLFDAATGALVAERRTEEPLSVVAF HPEGQWLVVGSYKGLMTVLSAPALEYGSEERGHLGPVTALAFAPDGTLYSGGWDKHVRAWRTSVEGLRPGQARMRFERRA GSVVLGGTVNDKAPLSFALDARAPALVLTSEAAAAAGIDVPFLKETVNVPGPLGTIAARLAPAQSLRFKSMRVEGVDVAI CDACVPQGTQGVLGAPFSERVDVAFDEVTQEAVLSLKGGPPEGAVTVDALVLARRSEFPFPAYVSDVTVDARGQRLGVGL SEQKPERDRGVYERERKGVEEPQGPFNAGALVDAQSGQVLAKWPVHRGVVATAAISPDGRSLASGGWDKRVYLFTEGDVD ARGEHRFDWSVRRVRFSPDGRWLGVAAWTPQVASRDGDSDPAAVLLDVGYESPTVQGPGTAGASVAP
Sequences:
>Translated_547_residues MKFARGAFALLAGGVVAVGGGGCAHAPPRVSPELSARLESEPGTWVSGSASGLGRKAVLNNKDFIWGLAFAPQGARVAYS RLGSKSYFLSVWELGSAEPTMLADPAINPYEFDVEGVAFSPDGTRVATAGKDSVVRLFDAATGALVAERRTEEPLSVVAF HPEGQWLVVGSYKGLMTVLSAPALEYGSEERGHLGPVTALAFAPDGTLYSGGWDKHVRAWRTSVEGLRPGQARMRFERRA GSVVLGGTVNDKAPLSFALDARAPALVLTSEAAAAAGIDVPFLKETVNVPGPLGTIAARLAPAQSLRFKSMRVEGVDVAI CDACVPQGTQGVLGAPFSERVDVAFDEVTQEAVLSLKGGPPEGAVTVDALVLARRSEFPFPAYVSDVTVDARGQRLGVGL SEQKPERDRGVYERERKGVEEPQGPFNAGALVDAQSGQVLAKWPVHRGVVATAAISPDGRSLASGGWDKRVYLFTEGDVD ARGEHRFDWSVRRVRFSPDGRWLGVAAWTPQVASRDGDSDPAAVLLDVGYESPTVQGPGTAGASVAP >Mature_547_residues MKFARGAFALLAGGVVAVGGGGCAHAPPRVSPELSARLESEPGTWVSGSASGLGRKAVLNNKDFIWGLAFAPQGARVAYS RLGSKSYFLSVWELGSAEPTMLADPAINPYEFDVEGVAFSPDGTRVATAGKDSVVRLFDAATGALVAERRTEEPLSVVAF HPEGQWLVVGSYKGLMTVLSAPALEYGSEERGHLGPVTALAFAPDGTLYSGGWDKHVRAWRTSVEGLRPGQARMRFERRA GSVVLGGTVNDKAPLSFALDARAPALVLTSEAAAAAGIDVPFLKETVNVPGPLGTIAARLAPAQSLRFKSMRVEGVDVAI CDACVPQGTQGVLGAPFSERVDVAFDEVTQEAVLSLKGGPPEGAVTVDALVLARRSEFPFPAYVSDVTVDARGQRLGVGL SEQKPERDRGVYERERKGVEEPQGPFNAGALVDAQSGQVLAKWPVHRGVVATAAISPDGRSLASGGWDKRVYLFTEGDVD ARGEHRFDWSVRRVRFSPDGRWLGVAAWTPQVASRDGDSDPAAVLLDVGYESPTVQGPGTAGASVAP
Specific function: May play a regulatory role during the complex growth cycle and in secondary metabolite production [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 WD repeats [H]
Homologues:
Organism=Homo sapiens, GI26665869, Length=114, Percent_Identity=32.4561403508772, Blast_Score=70, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020472 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00069 Pkinase; PF00400 WD40 [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 57483; Mature: 57483
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01047 HMA_1 ; PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFARGAFALLAGGVVAVGGGGCAHAPPRVSPELSARLESEPGTWVSGSASGLGRKAVLN CCCCHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHEECCCCCCEECCCCCCCCCEEEEC NKDFIWGLAFAPQGARVAYSRLGSKSYFLSVWELGSAEPTMLADPAINPYEFDVEGVAFS CCCEEEEEEECCCCCHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCCCEEEEEEEEEEC PDGTRVATAGKDSVVRLFDAATGALVAERRTEEPLSVVAFHPEGQWLVVGSYKGLMTVLS CCCCEEEECCCCCEEEEEHHHCCHHHHHCCCCCCCEEEEECCCCCEEEEECCHHHHHHHH APALEYGSEERGHLGPVTALAFAPDGTLYSGGWDKHVRAWRTSVEGLRPGQARMRFERRA CCHHHCCCCCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCC GSVVLGGTVNDKAPLSFALDARAPALVLTSEAAAAAGIDVPFLKETVNVPGPLGTIAARL CCEEECCCCCCCCCEEEEECCCCCEEEEECCCHHHCCCCCHHHHHHCCCCCCHHHHHHHH APAQSLRFKSMRVEGVDVAICDACVPQGTQGVLGAPFSERVDVAFDEVTQEAVLSLKGGP CCHHHHEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCC PEGAVTVDALVLARRSEFPFPAYVSDVTVDARGQRLGVGLSEQKPERDRGVYERERKGVE CCCCEEHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCHHCCHHHHHHCCCC EPQGPFNAGALVDAQSGQVLAKWPVHRGVVATAAISPDGRSLASGGWDKRVYLFTEGDVD CCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEECCCCCHHCCCCCCCEEEEEECCCCC ARGEHRFDWSVRRVRFSPDGRWLGVAAWTPQVASRDGDSDPAAVLLDVGYESPTVQGPGT CCCCEEECEEEEEEEECCCCCEEEEEECCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCC AGASVAP CCCCCCC >Mature Secondary Structure MKFARGAFALLAGGVVAVGGGGCAHAPPRVSPELSARLESEPGTWVSGSASGLGRKAVLN CCCCHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHEECCCCCCEECCCCCCCCCEEEEC NKDFIWGLAFAPQGARVAYSRLGSKSYFLSVWELGSAEPTMLADPAINPYEFDVEGVAFS CCCEEEEEEECCCCCHHHHHHCCCCEEEEEEEECCCCCCCEEECCCCCCEEEEEEEEEEC PDGTRVATAGKDSVVRLFDAATGALVAERRTEEPLSVVAFHPEGQWLVVGSYKGLMTVLS CCCCEEEECCCCCEEEEEHHHCCHHHHHCCCCCCCEEEEECCCCCEEEEECCHHHHHHHH APALEYGSEERGHLGPVTALAFAPDGTLYSGGWDKHVRAWRTSVEGLRPGQARMRFERRA CCHHHCCCCCCCCCCCEEEEEECCCCCEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCC GSVVLGGTVNDKAPLSFALDARAPALVLTSEAAAAAGIDVPFLKETVNVPGPLGTIAARL CCEEECCCCCCCCCEEEEECCCCCEEEEECCCHHHCCCCCHHHHHHCCCCCCHHHHHHHH APAQSLRFKSMRVEGVDVAICDACVPQGTQGVLGAPFSERVDVAFDEVTQEAVLSLKGGP CCHHHHEEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCC PEGAVTVDALVLARRSEFPFPAYVSDVTVDARGQRLGVGLSEQKPERDRGVYERERKGVE CCCCEEHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCHHCCHHHHHHCCCC EPQGPFNAGALVDAQSGQVLAKWPVHRGVVATAAISPDGRSLASGGWDKRVYLFTEGDVD CCCCCCCCCEEEECCCCCEEEECCCCCCEEEEEEECCCCCHHCCCCCCCEEEEEECCCCC ARGEHRFDWSVRRVRFSPDGRWLGVAAWTPQVASRDGDSDPAAVLLDVGYESPTVQGPGT CCCCEEECEEEEEEEECCCCCEEEEEECCCHHHCCCCCCCCEEEEEEECCCCCCCCCCCC AGASVAP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8631732 [H]