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The map label for this gene is rcaC [H]

Identifier: 108762799

GI number: 108762799

Start: 829172

End: 829669

Strand: Reverse

Name: rcaC [H]

Synonym: MXAN_0726

Alternate gene names: 108762799

Gene position: 829669-829172 (Counterclockwise)

Preceding gene: 108760585

Following gene: 108762821

Centisome position: 9.08

GC content: 67.87

Gene sequence:

>498_bases
ATGTGGGGGGCGACAGGGAATGACGTCTGGAGGATACTTACCCCGTCAGGAAGCACCCGCAGTGCCATCCGCACGCTGAA
GGGGGAAGCCATGCCGGAGACCAAGATTCGCGTCCTCATCGTGGACGATGACCAGGACCAGCTCTCCCTCGTGGAGCGCA
CCCTCTCCGCCTTCGGCTTCGACGTCCGCACCCACCGCTCCTCCCTGGGCGTGTCCAACCTGGTGCGCACCACCCAGCCG
GACCTGGTGCTGCTGGACGTGAACATCCCCGCGCTCAGCGGAGACAAGGTGCTCACGCTCGCGCGCGGTCAGGCCCCCAA
GGGCACGAAGTTCATCCTCTACTCCGCGTCGGACGAATCCCAGTTGCGCGCCCTGGCGCGCGCCTCGGGCGCGGACGGCT
ACATCTGCAAGAGCGTGCAGGGCGAGGAGCTGGCCCAGCGGCTGGAAGCGCTCCACCTCAAGCCCGCGGCTTCGGAAGCC
GTGCAGGCCGCGCGTTAG

Upstream 100 bases:

>100_bases
GGTCCTCCAGGATGGCCACCCGGATGCGTTCCGATTCCATGGCCCTTCCACCCTCCCCTGTCCGTCCCCTGCGATTCAAC
CCCGCTAAGGGGATTCCCTC

Downstream 100 bases:

>100_bases
CGCGGCGCCGGCCTCACGCGGGCAGGTCCGTCACTTCCAGGAAGACCGCGCGGAAGTCCCCCCGCGCGCCGATGAGCCTC
AGGTTCTGCGCCAGCCCACC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MWGATGNDVWRILTPSGSTRSAIRTLKGEAMPETKIRVLIVDDDQDQLSLVERTLSAFGFDVRTHRSSLGVSNLVRTTQP
DLVLLDVNIPALSGDKVLTLARGQAPKGTKFILYSASDESQLRALARASGADGYICKSVQGEELAQRLEALHLKPAASEA
VQAAR

Sequences:

>Translated_165_residues
MWGATGNDVWRILTPSGSTRSAIRTLKGEAMPETKIRVLIVDDDQDQLSLVERTLSAFGFDVRTHRSSLGVSNLVRTTQP
DLVLLDVNIPALSGDKVLTLARGQAPKGTKFILYSASDESQLRALARASGADGYICKSVQGEELAQRLEALHLKPAASEA
VQAAR
>Mature_165_residues
MWGATGNDVWRILTPSGSTRSAIRTLKGEAMPETKIRVLIVDDDQDQLSLVERTLSAFGFDVRTHRSSLGVSNLVRTTQP
DLVLLDVNIPALSGDKVLTLARGQAPKGTKFILYSASDESQLRALARASGADGYICKSVQGEELAQRLEALHLKPAASEA
VQAAR

Specific function: Required for chromatic adaptation. Thought to be a positive regulator of phycobiliproteins [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 response regulatory domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR008207
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01627 Hpt; PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 17786; Mature: 17786

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGATGNDVWRILTPSGSTRSAIRTLKGEAMPETKIRVLIVDDDQDQLSLVERTLSAFGF
CCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
DVRTHRSSLGVSNLVRTTQPDLVLLDVNIPALSGDKVLTLARGQAPKGTKFILYSASDES
CHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCHH
QLRALARASGADGYICKSVQGEELAQRLEALHLKPAASEAVQAAR
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCC
>Mature Secondary Structure
MWGATGNDVWRILTPSGSTRSAIRTLKGEAMPETKIRVLIVDDDQDQLSLVERTLSAFGF
CCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
DVRTHRSSLGVSNLVRTTQPDLVLLDVNIPALSGDKVLTLARGQAPKGTKFILYSASDES
CHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCHH
QLRALARASGADGYICKSVQGEELAQRLEALHLKPAASEAVQAAR
HHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1409650 [H]