| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is apt
Identifier: 108762776
GI number: 108762776
Start: 6666289
End: 6666843
Strand: Direct
Name: apt
Synonym: MXAN_5352
Alternate gene names: 108762776
Gene position: 6666289-6666843 (Clockwise)
Preceding gene: 108758686
Following gene: 108762228
Centisome position: 72.94
GC content: 70.81
Gene sequence:
>555_bases ATGCACCCGCCCGTCCCGAGCCTGACCGACACCACCCTCGTCGCCGACCTGAATGCCCGGCTCCGGGACGTACCGGACTT CCCCAAGCCCGGCATCGTCTTCAAGGACATCACCCCCGTGCTGGCGGACCCGCGCCTGTTCGGCCGCGTCATCGACGCCA TGTCGGCGCCCTTCCGGGGCCAGCACGTCACGAAGGTGGTGGGCGTGGAGGCCCGAGGCTTCCTGCTGGGCGCCCCCATC GCGCTGGCGCTCAACGCGGGCTTCGTGCCGGCGCGCAAGCCTGGGAAGCTGCCTCACCGCTCGGTGGTGGAGCGCTACTC GCTGGAGTACGGCTCTGACGGCGTGGAGATGCACGAGGACGCCATCCTCCAGGGGGAGCGGGTGCTCGTCGTGGATGACG TGCTGGCCACGGGAGGCACGGCGGAGGCCACCGCGAGGCTCGTGTCCCGGCTCGGCGGCGAGTTGGTGGGCTTCTGCTTC CTCCTCAGCCTGGACTTCCTCGAAGGCCCCAACCGCCTCGGGCGCGAGCGCGTGACGACGCTGCTGACCTTCTGA
Upstream 100 bases:
>100_bases TCGCCATGGCGACAGGGCGGGCGGCCGTCCGAGCCTTCCGTCCCCCGGTCCTCCCCTTCCCCGCCCCACCGTTTTTCATC CTCCCGCTGGAGCGCACGCC
Downstream 100 bases:
>100_bases TTGGCGCGTGCCGACCGCGAAGCGCTCCGGCCTCTCCCACCGGAGCGCGATGCCACGCCCGGACGACGGCACGCCCACGG GGATGAGCGGCGAGCAACCT
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MHPPVPSLTDTTLVADLNARLRDVPDFPKPGIVFKDITPVLADPRLFGRVIDAMSAPFRGQHVTKVVGVEARGFLLGAPI ALALNAGFVPARKPGKLPHRSVVERYSLEYGSDGVEMHEDAILQGERVLVVDDVLATGGTAEATARLVSRLGGELVGFCF LLSLDFLEGPNRLGRERVTTLLTF
Sequences:
>Translated_184_residues MHPPVPSLTDTTLVADLNARLRDVPDFPKPGIVFKDITPVLADPRLFGRVIDAMSAPFRGQHVTKVVGVEARGFLLGAPI ALALNAGFVPARKPGKLPHRSVVERYSLEYGSDGVEMHEDAILQGERVLVVDDVLATGGTAEATARLVSRLGGELVGFCF LLSLDFLEGPNRLGRERVTTLLTF >Mature_184_residues MHPPVPSLTDTTLVADLNARLRDVPDFPKPGIVFKDITPVLADPRLFGRVIDAMSAPFRGQHVTKVVGVEARGFLLGAPI ALALNAGFVPARKPGKLPHRSVVERYSLEYGSDGVEMHEDAILQGERVLVVDDVLATGGTAEATARLVSRLGGELVGFCF LLSLDFLEGPNRLGRERVTTLLTF
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=171, Percent_Identity=40.9356725146199, Blast_Score=126, Evalue=1e-29, Organism=Homo sapiens, GI71773201, Length=125, Percent_Identity=44.8, Blast_Score=107, Evalue=4e-24, Organism=Escherichia coli, GI1786675, Length=164, Percent_Identity=51.219512195122, Blast_Score=178, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17509087, Length=170, Percent_Identity=41.1764705882353, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323619, Length=178, Percent_Identity=40.4494382022472, Blast_Score=125, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6320649, Length=166, Percent_Identity=35.5421686746988, Blast_Score=92, Evalue=7e-20, Organism=Drosophila melanogaster, GI17136334, Length=181, Percent_Identity=36.4640883977901, Blast_Score=108, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_MYXXD (Q1D1H1)
Other databases:
- EMBL: CP000113 - RefSeq: YP_633502.1 - ProteinModelPortal: Q1D1H1 - SMR: Q1D1H1 - STRING: Q1D1H1 - GeneID: 4106529 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_5352 - TIGR: MXAN_5352 - eggNOG: COG0503 - HOGENOM: HBG703830 - OMA: GILFYDI - PhylomeDB: Q1D1H1 - ProtClustDB: PRK02304 - BioCyc: MXAN246197:MXAN_5352-MONOMER - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 19838; Mature: 19838
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPPVPSLTDTTLVADLNARLRDVPDFPKPGIVFKDITPVLADPRLFGRVIDAMSAPFRG CCCCCCCCCCCCCEECCCHHHHCCCCCCCCCEECCCCCHHHCCHHHHHHHHHHHCCCCCC QHVTKVVGVEARGFLLGAPIALALNAGFVPARKPGKLPHRSVVERYSLEYGSDGVEMHED CCHHHHCCCCCCCEEECCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH AILQGERVLVVDDVLATGGTAEATARLVSRLGGELVGFCFLLSLDFLEGPNRLGRERVTT HHHCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LLTF HHCC >Mature Secondary Structure MHPPVPSLTDTTLVADLNARLRDVPDFPKPGIVFKDITPVLADPRLFGRVIDAMSAPFRG CCCCCCCCCCCCCEECCCHHHHCCCCCCCCCEECCCCCHHHCCHHHHHHHHHHHCCCCCC QHVTKVVGVEARGFLLGAPIALALNAGFVPARKPGKLPHRSVVERYSLEYGSDGVEMHED CCHHHHCCCCCCCEEECCCHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH AILQGERVLVVDDVLATGGTAEATARLVSRLGGELVGFCFLLSLDFLEGPNRLGRERVTT HHHCCCEEEEEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LLTF HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA