| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762774
Identifier: 108762774
GI number: 108762774
Start: 2797053
End: 2798948
Strand: Direct
Name: 108762774
Synonym: MXAN_2405
Alternate gene names: NA
Gene position: 2797053-2798948 (Clockwise)
Preceding gene: 108763800
Following gene: 108760796
Centisome position: 30.6
GC content: 70.36
Gene sequence:
>1896_bases ATGAGCCAGTCCCCCTCCCAGACGCCCAGTCCCAGCGGCCTCCGCATCCAACCGTCCGACTCACCGGGTGACGCGGGCGC CTCCGCGGCGCAGGATCCGGAACGTTACTGGCTGGAGCACGTCTATCAGGGTGGGGTGCGTCAGCTCACGGTGCGCGCCG TCATCGCCGGCATGGTGATTGGCGCGGTGATGTGCCTGTCCAACCTGTACGTCATCCTCAAGACGGGCTGGAGCCTGGGC GTCACCATCACCGCCTGCATCCTGGCCTTCGCGGTGTTCGGCACGCTGCGCTCGATTCGGGTGCTGAAGACGGAGTTCAC CGACCTGGAGAACAACGCCATGGGCTCGGTGGCGTCGGCCGCCGGCTACATGACGGGCGGTGGCAACATGGCCGCGGTGC CCGCGCTGCTGATGCTGACGGGCACGCTGCCGTCCTCGGGCTGGCTGATGGTGTGGTTCGCCGTCATCTCCGCGCTGGGC GTCTTCGCGGCCATCCCCATCAAGCGCCAGCTCATCAACGTGGAGGCGCTGCCGTTCCCCACGGGCACGGCGACCGCGGA GACCATCCGCGCGCTGCACGGCCATGGCGAGGTGGCCCGCCGCAAGTCGCGGCTCCTGGGCATCGCGGGCGGCATCGGCG CGCTCGTGGTGGCGCTGCGGGACGCGCGCTTCACGTGGCTGGCCAACATCCCGGAGAAGGTGAGCCTGCCCTTCACGATG TTGGGCAAAAAGGCGTCGGCGTGGTCGCTGTCCTTCGAGTTCAGCCTGCTGCTGGTGGGCGCGGGCGCGCTGGTGAGCTT CCGCACGGGCTGGTCCATGCTGCTGGGCGCCGTGCTCACCTACGGCTTCCTCGCGCCGGCCATGGTGAGCCAGGGCGCCA TCGGCGAGGTGACCTACCGCGCCATCAACAGCTGGATGGTGTGGACGGGCTCGGCGGTGCTGGTGTCCTCGGGCCTGCTC TCCTTCGCCTTCCAGTGGCGCAGCGTGGCGCGCTCCTTCAAGTCGCTGTCCGGCCTGTTCAAGGGGAAGAACGCGAAGGA GGAGGATGCCGACCCGCTGGCCGGCATCGAGTGCCCGCCCGCGTGGTTCCCCCTGGGCTTCGCGATTCTCGGCCCGGTGG CCGTGTTCCTCATGGCCTACCTGTTCCAGATTCCGTGGTGGGCGGGCGTGCTGGCCATGCCGCTGGCCGTCGTCATGGGC GTCATCGCCAGCCGGGTGACGGGTGAGACGGACACCACGCCCACCAAGGCGCTGGGCCCCGTCACGCAGCTCATCTTCGG CGGCCTGGCGCCGGGCAACATCCCCGCCAACGTCATGAGCGCCAACGCGACGGGCGGCGTGGGGCTCCACTCGGCGGACC TGCTGACGGACCTCAAGTCCGGGTGGCTGCTGGGCGCCAATCCGCGCCAGCAGTTCGTCGCGCAGCTCTTCGGCGTGGTG GCCGGCGCGGCCGTGGTGGTGCCCGTGTTCAAGATTCTGGTGCCAGACGCCAGCATGCTGGGCACGGAGGAGTTCCCCGC GCCCGCCTCCATGGTGTGGGCCGGCGTGTCGAAGCTGCTCGCCACGGGCGTGGCCGCGCTGCCGGGCTCGGCGCGCATGG GCGCGCTGTGCGGCGCGGCGCTGGGCATCTTCCTGGTGCTGCTGGAGCGCTGGGCCCCGGCGAAGGCCAAGGCCTACGTG CCGTCCCCCGCGGGCTTCGGGCTGGCCATCGTGATTCCGGGCTCCAGCTCCATCGCCTTCTTCCTGGGCTCGGCCATCGC CGAGCTGCTGCGCCGCACGAAGCCGAAGCTGGCGGAGGACATGGTGCTGCCGGTGTCCTCCGGCTTCATCGCCGGGGAGA GCCTGCTGGGCATCGGCATCGCGATGGCGAAGGCCTTCGGCGTGATGCCCAAGTAG
Upstream 100 bases:
>100_bases TAGGCTCCTGACGCGGCGCGGCCAGCCTTCCAGGTTGGCCCGCCCCGTCAAACGCGGTGCTCGCCGGGGGGCGTGGGGGT GAACTATCTTCGCCGCCCCC
Downstream 100 bases:
>100_bases GCCGCCGCGGGGCGGGGCGTCTCAGTCCACCCGGAAGGTGGAGAACGAGGCGCCCGCCACGAAGCGGAAGGTGGGCGTGT CCATGCCGGCGCCCACGCCC
Product: OPT family oligopeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MSQSPSQTPSPSGLRIQPSDSPGDAGASAAQDPERYWLEHVYQGGVRQLTVRAVIAGMVIGAVMCLSNLYVILKTGWSLG VTITACILAFAVFGTLRSIRVLKTEFTDLENNAMGSVASAAGYMTGGGNMAAVPALLMLTGTLPSSGWLMVWFAVISALG VFAAIPIKRQLINVEALPFPTGTATAETIRALHGHGEVARRKSRLLGIAGGIGALVVALRDARFTWLANIPEKVSLPFTM LGKKASAWSLSFEFSLLLVGAGALVSFRTGWSMLLGAVLTYGFLAPAMVSQGAIGEVTYRAINSWMVWTGSAVLVSSGLL SFAFQWRSVARSFKSLSGLFKGKNAKEEDADPLAGIECPPAWFPLGFAILGPVAVFLMAYLFQIPWWAGVLAMPLAVVMG VIASRVTGETDTTPTKALGPVTQLIFGGLAPGNIPANVMSANATGGVGLHSADLLTDLKSGWLLGANPRQQFVAQLFGVV AGAAVVVPVFKILVPDASMLGTEEFPAPASMVWAGVSKLLATGVAALPGSARMGALCGAALGIFLVLLERWAPAKAKAYV PSPAGFGLAIVIPGSSSIAFFLGSAIAELLRRTKPKLAEDMVLPVSSGFIAGESLLGIGIAMAKAFGVMPK
Sequences:
>Translated_631_residues MSQSPSQTPSPSGLRIQPSDSPGDAGASAAQDPERYWLEHVYQGGVRQLTVRAVIAGMVIGAVMCLSNLYVILKTGWSLG VTITACILAFAVFGTLRSIRVLKTEFTDLENNAMGSVASAAGYMTGGGNMAAVPALLMLTGTLPSSGWLMVWFAVISALG VFAAIPIKRQLINVEALPFPTGTATAETIRALHGHGEVARRKSRLLGIAGGIGALVVALRDARFTWLANIPEKVSLPFTM LGKKASAWSLSFEFSLLLVGAGALVSFRTGWSMLLGAVLTYGFLAPAMVSQGAIGEVTYRAINSWMVWTGSAVLVSSGLL SFAFQWRSVARSFKSLSGLFKGKNAKEEDADPLAGIECPPAWFPLGFAILGPVAVFLMAYLFQIPWWAGVLAMPLAVVMG VIASRVTGETDTTPTKALGPVTQLIFGGLAPGNIPANVMSANATGGVGLHSADLLTDLKSGWLLGANPRQQFVAQLFGVV AGAAVVVPVFKILVPDASMLGTEEFPAPASMVWAGVSKLLATGVAALPGSARMGALCGAALGIFLVLLERWAPAKAKAYV PSPAGFGLAIVIPGSSSIAFFLGSAIAELLRRTKPKLAEDMVLPVSSGFIAGESLLGIGIAMAKAFGVMPK >Mature_630_residues SQSPSQTPSPSGLRIQPSDSPGDAGASAAQDPERYWLEHVYQGGVRQLTVRAVIAGMVIGAVMCLSNLYVILKTGWSLGV TITACILAFAVFGTLRSIRVLKTEFTDLENNAMGSVASAAGYMTGGGNMAAVPALLMLTGTLPSSGWLMVWFAVISALGV FAAIPIKRQLINVEALPFPTGTATAETIRALHGHGEVARRKSRLLGIAGGIGALVVALRDARFTWLANIPEKVSLPFTML GKKASAWSLSFEFSLLLVGAGALVSFRTGWSMLLGAVLTYGFLAPAMVSQGAIGEVTYRAINSWMVWTGSAVLVSSGLLS FAFQWRSVARSFKSLSGLFKGKNAKEEDADPLAGIECPPAWFPLGFAILGPVAVFLMAYLFQIPWWAGVLAMPLAVVMGV IASRVTGETDTTPTKALGPVTQLIFGGLAPGNIPANVMSANATGGVGLHSADLLTDLKSGWLLGANPRQQFVAQLFGVVA GAAVVVPVFKILVPDASMLGTEEFPAPASMVWAGVSKLLATGVAALPGSARMGALCGAALGIFLVLLERWAPAKAKAYVP SPAGFGLAIVIPGSSSIAFFLGSAIAELLRRTKPKLAEDMVLPVSSGFIAGESLLGIGIAMAKAFGVMPK
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321324, Length=255, Percent_Identity=31.7647058823529, Blast_Score=100, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 65567; Mature: 65436
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSPSQTPSPSGLRIQPSDSPGDAGASAAQDPERYWLEHVYQGGVRQLTVRAVIAGMVI CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH GAVMCLSNLYVILKTGWSLGVTITACILAFAVFGTLRSIRVLKTEFTDLENNAMGSVASA HHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AGYMTGGGNMAAVPALLMLTGTLPSSGWLMVWFAVISALGVFAAIPIKRQLINVEALPFP CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCC TGTATAETIRALHGHGEVARRKSRLLGIAGGIGALVVALRDARFTWLANIPEKVSLPFTM CCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCHHHCCCHHH LGKKASAWSLSFEFSLLLVGAGALVSFRTGWSMLLGAVLTYGFLAPAMVSQGAIGEVTYR HCCCCCCEEEEEEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AINSWMVWTGSAVLVSSGLLSFAFQWRSVARSFKSLSGLFKGKNAKEEDADPLAGIECPP HHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AWFPLGFAILGPVAVFLMAYLFQIPWWAGVLAMPLAVVMGVIASRVTGETDTTPTKALGP CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH VTQLIFGGLAPGNIPANVMSANATGGVGLHSADLLTDLKSGWLLGANPRQQFVAQLFGVV HHHHHHCCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHH AGAAVVVPVFKILVPDASMLGTEEFPAPASMVWAGVSKLLATGVAALPGSARMGALCGAA HHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LGIFLVLLERWAPAKAKAYVPSPAGFGLAIVIPGSSSIAFFLGSAIAELLRRTKPKLAED HHHHHHHHHHCCCCCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHH MVLPVSSGFIAGESLLGIGIAMAKAFGVMPK EEEECCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQSPSQTPSPSGLRIQPSDSPGDAGASAAQDPERYWLEHVYQGGVRQLTVRAVIAGMVI CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH GAVMCLSNLYVILKTGWSLGVTITACILAFAVFGTLRSIRVLKTEFTDLENNAMGSVASA HHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AGYMTGGGNMAAVPALLMLTGTLPSSGWLMVWFAVISALGVFAAIPIKRQLINVEALPFP CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCC TGTATAETIRALHGHGEVARRKSRLLGIAGGIGALVVALRDARFTWLANIPEKVSLPFTM CCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCHHHCCCHHH LGKKASAWSLSFEFSLLLVGAGALVSFRTGWSMLLGAVLTYGFLAPAMVSQGAIGEVTYR HCCCCCCEEEEEEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AINSWMVWTGSAVLVSSGLLSFAFQWRSVARSFKSLSGLFKGKNAKEEDADPLAGIECPP HHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC AWFPLGFAILGPVAVFLMAYLFQIPWWAGVLAMPLAVVMGVIASRVTGETDTTPTKALGP CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH VTQLIFGGLAPGNIPANVMSANATGGVGLHSADLLTDLKSGWLLGANPRQQFVAQLFGVV HHHHHHCCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHHHHHHHH AGAAVVVPVFKILVPDASMLGTEEFPAPASMVWAGVSKLLATGVAALPGSARMGALCGAA HHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LGIFLVLLERWAPAKAKAYVPSPAGFGLAIVIPGSSSIAFFLGSAIAELLRRTKPKLAED HHHHHHHHHHCCCCCCCEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHH MVLPVSSGFIAGESLLGIGIAMAKAFGVMPK EEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]