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The map label for this gene is ygiQ [C]

Identifier: 108762747

GI number: 108762747

Start: 6861192

End: 6863207

Strand: Direct

Name: ygiQ [C]

Synonym: MXAN_5510

Alternate gene names: 108762747

Gene position: 6861192-6863207 (Clockwise)

Preceding gene: 108762232

Following gene: 108763862

Centisome position: 75.07

GC content: 69.99

Gene sequence:

>2016_bases
ATGGCCCATTCGACGCGCTACGCCCATCCCTTCCTGCCCACCACCCGCGCCGACATGCAGGCGCGCGGCTGGGAGCAGTG
CGACATCATCATCGTGACGGGGGACGCGTACGTGGACCACCCGGCCTTCGGGCCGGTGCTCATCGCGCGCTTCCTGGAGG
GGCGCGGCTTCAAGGTGGGCCTCCTCCCCCAGCCGGACTGGCACTCGGCCGAGCCCTTCAAGGCGCTGGGGCCGCCGCGC
CTGTTCTTCGGCGTGGCCGCGGGCAACCTGGACTCGATGCTCAACCGGCTGACGGCCCAGAAGAAGAACCGCTCGGAAGA
CCAGTACAGCCCCGGCGGGCAGACGAACTGCCGGCCGGACCGGGCCACCATCGTCTACGCGCAGCGCTGCCGTGAGGCCT
ACCCCGACGTCCCCATCATCCTGGGTGGCATCGAGGCCAGCCTCCGCCGCATCGCCCACTTCGACTACTGGAGCGAGAAG
GTGCGCCGCTCCATCCTCTTCGACGCCAAGGCGGACCTGCTCGTCTTCGGCATGGGCGAGCGCCCCATCATGGAAGTGGC
GGACCGCATGCGCCAGGGTGAGCGCATCCAGGACATCCGCGACGTGCGCGGCACCGCGTACACCATCAACGACGAGGAGA
TGCGCGCCCTGGAGGCGGACCCGGCCAGACGCGCCGCGGACCGCAAGACGGTGGTGCTGCCGTCCTACGAGCAGGTCATC
GAGGACAAGCACGCCTTCGCGGTGATGAGCCGCGACTTCCAGATGGAGACCAACCCGGGCAACGCGCGTCCGCTGGCGCA
GCGCCACGGCAACCGCGCCATCTACATGAACTCGCCCGCGCTCCCGCTGGAGGACGGCGTGGGCACCGCGGGCGCCGAAG
GCAAGTCCGTGGCCATGGACGAGCTTTATGACCTGCCCTTCAACCGCGTGCCGCACCCGATGTACCGGGAGCGCATCCCC
GCCTACGAGACGGTGAAGCACTCCATCGTCCTCATGCGCGGGTGCTTCGGCGGCTGCACCTTCTGCTCCATCACCGAGCA
CGAGGGCCGCGTCATCCAGAGCCGCTCCGCGGAGAGCGTGCTGCGCGAGGTCCGCGCCCTGCGCCGCATGGGCGACTTCC
GGGGCACCATCACCGACCTGGGTGGCCCCACCGCCAACATGTACAAGCTCAAGTGCAAGAGCGAGGACATCGAGAAGCGG
TGCCGCAAGCTGTCCTGCGTCCACCCGGGCGTGTGTGAGAACCTCCAGACGGACCACGGCCCCCTCATCAGCCTCATGCA
GGACGTGCGCAAGGAGGACGGCGTCAAGCACGTCTTCATCGCCAGCGGCGTGCGGTACGACCTGGCGGAGCGCTCGCCGG
AGTACGTGAAGGAGCTGGCCGCGCACCACGTGGGTGGGCAGTTGTCCGTGGCGCCGGAGCACGTCTCCCCGCGCGTGCTG
GAGAAGATGAAGAAGCCCGGCATCGAGAGCTTCGAGCGCTTCCAGCAGATGTTCGCGTGCGCCAGCGAAGAGGCCGGCAA
GGAGCAGTACGACATCCCCTACTTCATCAGCGGCCACCCGGGCTCCACGCTGGAGGACATGGTGGAGCTGGCGCTGTGGC
TGAAGCAGAACGGCAAGCGGCCCCGGCAGGTGCAGGACTTCATCCCCACCCCCATGGCCATGGCCACCGCCATGTACTTC
ACGGGCCTGGACCCGCTGAAGATGGAGCCCGTCTACACGGCCCAGGGCCTGCGCGAGAAGCGGCTCCAGAAGGCGCTGCT
GCTCTACTGGAACCCGGAGCAGTGGCCACTGGCGCGCGAGGCGCTGAAGCTGGCCGGCCGCGAGGACCTCATCGGTCGCG
GGCCCCACGCGCTCGTCCCGCCGGAGTCCCCCGGGGAGGCCGCGCGCCGGCAGCGTACCGAGCGCGACACCGGCGCTGGT
GCTTCCGCGCCGCGTCACGAGGCCGCGCCCCGGCTCGGACCGCATGGAACCGCACGTCCCCGGGCGCGCCGTCCCGGTGG
GCCTCGCGCCCGCTGA

Upstream 100 bases:

>100_bases
GGGTAGGAAGGCAGGCCGCCCCGGTGTACACCCTCTCCAGCCGGGCTTGCTTCCACGTCCTCCCGATGTTCTGGGTGGAA
GCCCCCTGCCCCTCACCGAC

Downstream 100 bases:

>100_bases
GCCCCCTGGGACATGGGGGCCCGAACGCGCGGTTTGAATAAACCGCCGCGATTTTCGTCGGGCCTCCCACCATGCTCAGC
CTCCTTTCCGCGTTGTGGCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 670

Protein sequence:

>671_residues
MAHSTRYAHPFLPTTRADMQARGWEQCDIIIVTGDAYVDHPAFGPVLIARFLEGRGFKVGLLPQPDWHSAEPFKALGPPR
LFFGVAAGNLDSMLNRLTAQKKNRSEDQYSPGGQTNCRPDRATIVYAQRCREAYPDVPIILGGIEASLRRIAHFDYWSEK
VRRSILFDAKADLLVFGMGERPIMEVADRMRQGERIQDIRDVRGTAYTINDEEMRALEADPARRAADRKTVVLPSYEQVI
EDKHAFAVMSRDFQMETNPGNARPLAQRHGNRAIYMNSPALPLEDGVGTAGAEGKSVAMDELYDLPFNRVPHPMYRERIP
AYETVKHSIVLMRGCFGGCTFCSITEHEGRVIQSRSAESVLREVRALRRMGDFRGTITDLGGPTANMYKLKCKSEDIEKR
CRKLSCVHPGVCENLQTDHGPLISLMQDVRKEDGVKHVFIASGVRYDLAERSPEYVKELAAHHVGGQLSVAPEHVSPRVL
EKMKKPGIESFERFQQMFACASEEAGKEQYDIPYFISGHPGSTLEDMVELALWLKQNGKRPRQVQDFIPTPMAMATAMYF
TGLDPLKMEPVYTAQGLREKRLQKALLLYWNPEQWPLAREALKLAGREDLIGRGPHALVPPESPGEAARRQRTERDTGAG
ASAPRHEAAPRLGPHGTARPRARRPGGPRAR

Sequences:

>Translated_671_residues
MAHSTRYAHPFLPTTRADMQARGWEQCDIIIVTGDAYVDHPAFGPVLIARFLEGRGFKVGLLPQPDWHSAEPFKALGPPR
LFFGVAAGNLDSMLNRLTAQKKNRSEDQYSPGGQTNCRPDRATIVYAQRCREAYPDVPIILGGIEASLRRIAHFDYWSEK
VRRSILFDAKADLLVFGMGERPIMEVADRMRQGERIQDIRDVRGTAYTINDEEMRALEADPARRAADRKTVVLPSYEQVI
EDKHAFAVMSRDFQMETNPGNARPLAQRHGNRAIYMNSPALPLEDGVGTAGAEGKSVAMDELYDLPFNRVPHPMYRERIP
AYETVKHSIVLMRGCFGGCTFCSITEHEGRVIQSRSAESVLREVRALRRMGDFRGTITDLGGPTANMYKLKCKSEDIEKR
CRKLSCVHPGVCENLQTDHGPLISLMQDVRKEDGVKHVFIASGVRYDLAERSPEYVKELAAHHVGGQLSVAPEHVSPRVL
EKMKKPGIESFERFQQMFACASEEAGKEQYDIPYFISGHPGSTLEDMVELALWLKQNGKRPRQVQDFIPTPMAMATAMYF
TGLDPLKMEPVYTAQGLREKRLQKALLLYWNPEQWPLAREALKLAGREDLIGRGPHALVPPESPGEAARRQRTERDTGAG
ASAPRHEAAPRLGPHGTARPRARRPGGPRAR
>Mature_670_residues
AHSTRYAHPFLPTTRADMQARGWEQCDIIIVTGDAYVDHPAFGPVLIARFLEGRGFKVGLLPQPDWHSAEPFKALGPPRL
FFGVAAGNLDSMLNRLTAQKKNRSEDQYSPGGQTNCRPDRATIVYAQRCREAYPDVPIILGGIEASLRRIAHFDYWSEKV
RRSILFDAKADLLVFGMGERPIMEVADRMRQGERIQDIRDVRGTAYTINDEEMRALEADPARRAADRKTVVLPSYEQVIE
DKHAFAVMSRDFQMETNPGNARPLAQRHGNRAIYMNSPALPLEDGVGTAGAEGKSVAMDELYDLPFNRVPHPMYRERIPA
YETVKHSIVLMRGCFGGCTFCSITEHEGRVIQSRSAESVLREVRALRRMGDFRGTITDLGGPTANMYKLKCKSEDIEKRC
RKLSCVHPGVCENLQTDHGPLISLMQDVRKEDGVKHVFIASGVRYDLAERSPEYVKELAAHHVGGQLSVAPEHVSPRVLE
KMKKPGIESFERFQQMFACASEEAGKEQYDIPYFISGHPGSTLEDMVELALWLKQNGKRPRQVQDFIPTPMAMATAMYFT
GLDPLKMEPVYTAQGLREKRLQKALLLYWNPEQWPLAREALKLAGREDLIGRGPHALVPPESPGEAARRQRTERDTGAGA
SAPRHEAAPRLGPHGTARPRARRPGGPRAR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=678, Percent_Identity=50, Blast_Score=679, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 75235; Mature: 75104

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHSTRYAHPFLPTTRADMQARGWEQCDIIIVTGDAYVDHPAFGPVLIARFLEGRGFKVG
CCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCEECCCCHHHHHHHHHHCCCCCEEE
LLPQPDWHSAEPFKALGPPRLFFGVAAGNLDSMLNRLTAQKKNRSEDQYSPGGQTNCRPD
CCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RATIVYAQRCREAYPDVPIILGGIEASLRRIAHFDYWSEKVRRSILFDAKADLLVFGMGE
HHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
RPIMEVADRMRQGERIQDIRDVRGTAYTINDEEMRALEADPARRAADRKTVVLPSYEQVI
CHHHHHHHHHHCCCHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHCCCCEEECCCHHHHH
EDKHAFAVMSRDFQMETNPGNARPLAQRHGNRAIYMNSPALPLEDGVGTAGAEGKSVAMD
HHHHHHHHHHCCEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
ELYDLPFNRVPHPMYRERIPAYETVKHSIVLMRGCFGGCTFCSITEHEGRVIQSRSAESV
HHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHCCHHHH
LREVRALRRMGDFRGTITDLGGPTANMYKLKCKSEDIEKRCRKLSCVHPGVCENLQTDHG
HHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHCCCCCCC
PLISLMQDVRKEDGVKHVFIASGVRYDLAERSPEYVKELAAHHVGGQLSVAPEHVSPRVL
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCHHHH
EKMKKPGIESFERFQQMFACASEEAGKEQYDIPYFISGHPGSTLEDMVELALWLKQNGKR
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCC
PRQVQDFIPTPMAMATAMYFTGLDPLKMEPVYTAQGLREKRLQKALLLYWNPEQWPLARE
CHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHH
ALKLAGREDLIGRGPHALVPPESPGEAARRQRTERDTGAGASAPRHEAAPRLGPHGTARP
HHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCC
RARRPGGPRAR
CCCCCCCCCCC
>Mature Secondary Structure 
AHSTRYAHPFLPTTRADMQARGWEQCDIIIVTGDAYVDHPAFGPVLIARFLEGRGFKVG
CCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCEECCCCHHHHHHHHHHCCCCCEEE
LLPQPDWHSAEPFKALGPPRLFFGVAAGNLDSMLNRLTAQKKNRSEDQYSPGGQTNCRPD
CCCCCCCCCCCCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RATIVYAQRCREAYPDVPIILGGIEASLRRIAHFDYWSEKVRRSILFDAKADLLVFGMGE
HHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
RPIMEVADRMRQGERIQDIRDVRGTAYTINDEEMRALEADPARRAADRKTVVLPSYEQVI
CHHHHHHHHHHCCCHHHHHHHCCCCEEEECHHHHHHHCCCHHHHHCCCCEEECCCHHHHH
EDKHAFAVMSRDFQMETNPGNARPLAQRHGNRAIYMNSPALPLEDGVGTAGAEGKSVAMD
HHHHHHHHHHCCEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
ELYDLPFNRVPHPMYRERIPAYETVKHSIVLMRGCFGGCTFCSITEHEGRVIQSRSAESV
HHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHCCHHHH
LREVRALRRMGDFRGTITDLGGPTANMYKLKCKSEDIEKRCRKLSCVHPGVCENLQTDHG
HHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHCCCCCCC
PLISLMQDVRKEDGVKHVFIASGVRYDLAERSPEYVKELAAHHVGGQLSVAPEHVSPRVL
HHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCHHHHHHHHHHHCCCCEEECCCCCCHHHH
EKMKKPGIESFERFQQMFACASEEAGKEQYDIPYFISGHPGSTLEDMVELALWLKQNGKR
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCC
PRQVQDFIPTPMAMATAMYFTGLDPLKMEPVYTAQGLREKRLQKALLLYWNPEQWPLARE
CHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHH
ALKLAGREDLIGRGPHALVPPESPGEAARRQRTERDTGAGASAPRHEAAPRLGPHGTARP
HHHHCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCC
RARRPGGPRAR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA