| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is macB [H]
Identifier: 108762743
GI number: 108762743
Start: 6454742
End: 6457165
Strand: Reverse
Name: macB [H]
Synonym: MXAN_5168
Alternate gene names: 108762743
Gene position: 6457165-6454742 (Counterclockwise)
Preceding gene: 108760123
Following gene: 108760678
Centisome position: 70.65
GC content: 70.09
Gene sequence:
>2424_bases ATGGATACAATTCGTCAGGACATCCGGTTTGGCGCCAGGTTGTTGCTCAAGAGTCCGACGTTCACCCTGGTCGCGATGAT GACGCTGGCGCTGGGGATTGGCGCGAGCACGGCGATATTCAGCGTGGTCAACTCCATCTGGCTGCAACCCATGCGTTTCC CGCATGAGGAGCGTCTGGTGATGGTGTGGGACTCGCTTCCCAAGGCGGGTGTCGAGCGGAGCGAGACATCCCTGGCGACG CTGGAGGACTGGACCGCGCAGGCGGGGGGCTTCGAGCACGTGGCGGGGATTGTTCCGCGGAGCTTGAACATGGGCGGCGC GCTGCAGCCGGAGCGGCTCCAGGCGTTTCGGGTGGGCGCCGCGCTGTTCCCCGCGCTGGAGGCGAGGCCCTCGCTGGGCA GGGCGTTCTCCGCGGAAGAAGACCGCGTGGGTGGCGAGGCGGTGGTGGTGCTGTCGGACGCGTTGTGGCGGCGCCGGTTT GGTGGCGCGCCCTCCGTGCTGGGTGAGTCCGTCACGCTGGATGGTGAGCCCTACACGGTCGTGGGCGTGATGCCGAAGAG CTTCGACTTCCCGCCTGGCGCCGAAGCCTGGGTGCCGCTCGCGCCGACGCAGGCGGAGCTGGATGCGCGCGGGGACCGGA AGGTGCGGGTGGTGGGCCGCCTCAAGCCTGGCTTCTCCGTGTCGATGGCGGAGGACGCCCTGCGGGTCCTCGCAGGGCAA CTGGCGGAGCGGTACCCCGACACGGATTCGGAGCGCACCGTGCGGCTGACGTCCGTGCGCGAGGCCTACCTGGGGCCCTT GAGGCCGCTGCTCATCACCCTGGCGGGCGCGGTGGGCTTCGTGTTGCTCATCGGGTGCGCGAACGTCGCGAGCCTGCTGC TGGCGCGCGCGGCGGCCCGGCGGCGGGAGCTGGCCATTCGCGGGGCGCTGGGGGCGAGCCCGACGCGTCTGATGGTCCAG GCCCTGACCGAGAGCGTCTTGCTGTCGCTCCTGGGAGGAGGATTGGGAATCCTGGGCGCGCTGTGGGGCACGCACATGAT TGCCACCATGCTGCCGCCCGGGTTGGCGGAGCGCCTGCCAGGGTGGCAATCCATCCAGGTGGATGGAGGGGCGCTGCTGT TCTGTGTCGGGCTGTCCGCCATCACCGGGGTGCTGTTTGGCCTGGCGCCCGCGTTCCAGATGTCGCGGCAGAACCCGCTG GAGGCGATGCGGGAGGGGGCGGGCGCCACGGCGGGGCGAAAGAGCATCCGCTCGGCCCTGGTAACGGCGGAGGTGGCGCT GGCCTTGATGCTGGTCGTCGGCGCGAGCCTGATGCTTCGAAGCCTCTACCAGCTCCAGGGGACCTCACCCGGCTTCGCCG CCGAACGCGTGTTCTACTTCGACGTCACGCTGCCGGAGACCAGGTATCCGACGGACGCCGAGCGGGTTCGCTTCTTCCAT GCGCTGCAGGAGCGGTTGTCCTCCATTCCGGGAGCCCAGGCCGTCTCGGCGGCGAGCCTGCCGCCCATCAGCCGTCGCAG TCAGAGCTCGAACATCTATCCGGATGGGCAGCCGAAGCCGCTGCCCGGGCAGTTGCCCGAGGCCAGTCAGCGCGTCATCT CCCCGGGCTATTTCCGGACCATGGGCATCCCCTTGCACGAGGGGCGCGATTTCAACGCGTTGGACGTGGAGGACTCGCCC CGGGTCGCGATGATCAACTCGGCCCTGGCGCGGCGCTTCTGGCCCGGAGAGTCGCCGCTGGGCAAGCGCTTCTTCACGGG CGGCACCGAGCCGTGGGAGGTCATTGGCGTGGTGGGGGACGTCCGGACGCTGTGGCGCGGGCAGGTGCGTTCATCCGTGC CGGAGTTCTACCTGCCGCTGGCGCAGGCCCCACGTGACGCGATGGTGATGATGGTGACCGTGGGAGGGACGGGGGCGGCG GCGTCGTCGCTGGCGCTGTCCTTGCGAGAGGGCATGGCGTCGTTGGACCCCGAGCAACCACCGCCGTCGCCGCGGCCTTT GGAGGAGCTCATCGCGGAGTCGTTCGGCTCCAGGCACCTGCTGGCCGCGCTGCTGGGGTTCTTCGCGTGCGTGGCGCTGC TGCTGGCCGCCGGGGGCGTCTACGGCATCATGGCCTACTCCGTCACCCAGCGGCGGACGGAGATTGGCGTGCGCATGGCG CTGGGCGCGCGGGAGGGGAGCATCTTCTGGTTGATATTGAGCCAGGCGCTGCGGCTCGCCGGGCTGGGGGTCATCATCGG CTCCGTGCTGGCGTTGGTCCTGGCGCGGGGCCTGTCGAAGTTGCTCTTCGAGGTCAGCCCCGCGGACCCGCTCGTCTTCC TCGGGACGGCTTGCGTGCTGCTCTTCGTGGCGCTGGTGGCGGGCTACGTGCCCGCCTGGCGCGCCGCGCGCGTCCCGCCC AGCATGGCCATGCGCGAGGAGTGA
Upstream 100 bases:
>100_bases TTCGCGGACTTGGGTGTTCTCGGGCGCCGGGCCTGGGCCTTCGTGGTGATGCGCGTCGCCGCGGTGCACGCCGCATGGCA TGCTCTTGCGTGAGAGGGAC
Downstream 100 bases:
>100_bases GGGCTCAGGCGGCGATGAACTGCCGTTCCACGAGGCGCTTGTAGAGGCCGTCCTGGGTGATGAGCGCCTCGTGGTTTCCG TGCTGGACGACGCGGCCCTG
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MDTIRQDIRFGARLLLKSPTFTLVAMMTLALGIGASTAIFSVVNSIWLQPMRFPHEERLVMVWDSLPKAGVERSETSLAT LEDWTAQAGGFEHVAGIVPRSLNMGGALQPERLQAFRVGAALFPALEARPSLGRAFSAEEDRVGGEAVVVLSDALWRRRF GGAPSVLGESVTLDGEPYTVVGVMPKSFDFPPGAEAWVPLAPTQAELDARGDRKVRVVGRLKPGFSVSMAEDALRVLAGQ LAERYPDTDSERTVRLTSVREAYLGPLRPLLITLAGAVGFVLLIGCANVASLLLARAAARRRELAIRGALGASPTRLMVQ ALTESVLLSLLGGGLGILGALWGTHMIATMLPPGLAERLPGWQSIQVDGGALLFCVGLSAITGVLFGLAPAFQMSRQNPL EAMREGAGATAGRKSIRSALVTAEVALALMLVVGASLMLRSLYQLQGTSPGFAAERVFYFDVTLPETRYPTDAERVRFFH ALQERLSSIPGAQAVSAASLPPISRRSQSSNIYPDGQPKPLPGQLPEASQRVISPGYFRTMGIPLHEGRDFNALDVEDSP RVAMINSALARRFWPGESPLGKRFFTGGTEPWEVIGVVGDVRTLWRGQVRSSVPEFYLPLAQAPRDAMVMMVTVGGTGAA ASSLALSLREGMASLDPEQPPPSPRPLEELIAESFGSRHLLAALLGFFACVALLLAAGGVYGIMAYSVTQRRTEIGVRMA LGAREGSIFWLILSQALRLAGLGVIIGSVLALVLARGLSKLLFEVSPADPLVFLGTACVLLFVALVAGYVPAWRAARVPP SMAMREE
Sequences:
>Translated_807_residues MDTIRQDIRFGARLLLKSPTFTLVAMMTLALGIGASTAIFSVVNSIWLQPMRFPHEERLVMVWDSLPKAGVERSETSLAT LEDWTAQAGGFEHVAGIVPRSLNMGGALQPERLQAFRVGAALFPALEARPSLGRAFSAEEDRVGGEAVVVLSDALWRRRF GGAPSVLGESVTLDGEPYTVVGVMPKSFDFPPGAEAWVPLAPTQAELDARGDRKVRVVGRLKPGFSVSMAEDALRVLAGQ LAERYPDTDSERTVRLTSVREAYLGPLRPLLITLAGAVGFVLLIGCANVASLLLARAAARRRELAIRGALGASPTRLMVQ ALTESVLLSLLGGGLGILGALWGTHMIATMLPPGLAERLPGWQSIQVDGGALLFCVGLSAITGVLFGLAPAFQMSRQNPL EAMREGAGATAGRKSIRSALVTAEVALALMLVVGASLMLRSLYQLQGTSPGFAAERVFYFDVTLPETRYPTDAERVRFFH ALQERLSSIPGAQAVSAASLPPISRRSQSSNIYPDGQPKPLPGQLPEASQRVISPGYFRTMGIPLHEGRDFNALDVEDSP RVAMINSALARRFWPGESPLGKRFFTGGTEPWEVIGVVGDVRTLWRGQVRSSVPEFYLPLAQAPRDAMVMMVTVGGTGAA ASSLALSLREGMASLDPEQPPPSPRPLEELIAESFGSRHLLAALLGFFACVALLLAAGGVYGIMAYSVTQRRTEIGVRMA LGAREGSIFWLILSQALRLAGLGVIIGSVLALVLARGLSKLLFEVSPADPLVFLGTACVLLFVALVAGYVPAWRAARVPP SMAMREE >Mature_807_residues MDTIRQDIRFGARLLLKSPTFTLVAMMTLALGIGASTAIFSVVNSIWLQPMRFPHEERLVMVWDSLPKAGVERSETSLAT LEDWTAQAGGFEHVAGIVPRSLNMGGALQPERLQAFRVGAALFPALEARPSLGRAFSAEEDRVGGEAVVVLSDALWRRRF GGAPSVLGESVTLDGEPYTVVGVMPKSFDFPPGAEAWVPLAPTQAELDARGDRKVRVVGRLKPGFSVSMAEDALRVLAGQ LAERYPDTDSERTVRLTSVREAYLGPLRPLLITLAGAVGFVLLIGCANVASLLLARAAARRRELAIRGALGASPTRLMVQ ALTESVLLSLLGGGLGILGALWGTHMIATMLPPGLAERLPGWQSIQVDGGALLFCVGLSAITGVLFGLAPAFQMSRQNPL EAMREGAGATAGRKSIRSALVTAEVALALMLVVGASLMLRSLYQLQGTSPGFAAERVFYFDVTLPETRYPTDAERVRFFH ALQERLSSIPGAQAVSAASLPPISRRSQSSNIYPDGQPKPLPGQLPEASQRVISPGYFRTMGIPLHEGRDFNALDVEDSP RVAMINSALARRFWPGESPLGKRFFTGGTEPWEVIGVVGDVRTLWRGQVRSSVPEFYLPLAQAPRDAMVMMVTVGGTGAA ASSLALSLREGMASLDPEQPPPSPRPLEELIAESFGSRHLLAALLGFFACVALLLAAGGVYGIMAYSVTQRRTEIGVRMA LGAREGSIFWLILSQALRLAGLGVIIGSVLALVLARGLSKLLFEVSPADPLVFLGTACVLLFVALVAGYVPAWRAARVPP SMAMREE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=277, Percent_Identity=29.6028880866426, Blast_Score=83, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 86168; Mature: 86168
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIRQDIRFGARLLLKSPTFTLVAMMTLALGIGASTAIFSVVNSIWLQPMRFPHEERLV CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEE MVWDSLPKAGVERSETSLATLEDWTAQAGGFEHVAGIVPRSLNMGGALQPERLQAFRVGA EEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ALFPALEARPSLGRAFSAEEDRVGGEAVVVLSDALWRRRFGGAPSVLGESVTLDGEPYTV HHHHHHHCCCCCCCCCCCCHHCCCCCEEEEEHHHHHHHHCCCCHHHCCCCEEECCCCEEE VGVMPKSFDFPPGAEAWVPLAPTQAELDARGDRKVRVVGRLKPGFSVSMAEDALRVLAGQ EEECCCCCCCCCCCCCEEECCCCHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH LAERYPDTDSERTVRLTSVREAYLGPLRPLLITLAGAVGFVLLIGCANVASLLLARAAAR HHHHCCCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRELAIRGALGASPTRLMVQALTESVLLSLLGGGLGILGALWGTHMIATMLPPGLAERLP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCC GWQSIQVDGGALLFCVGLSAITGVLFGLAPAFQMSRQNPLEAMREGAGATAGRKSIRSAL CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHH VTAEVALALMLVVGASLMLRSLYQLQGTSPGFAAERVFYFDVTLPETRYPTDAERVRFFH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH ALQERLSSIPGAQAVSAASLPPISRRSQSSNIYPDGQPKPLPGQLPEASQRVISPGYFRT HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEE MGIPLHEGRDFNALDVEDSPRVAMINSALARRFWPGESPLGKRFFTGGTEPWEVIGVVGD ECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHH VRTLWRGQVRSSVPEFYLPLAQAPRDAMVMMVTVGGTGAAASSLALSLREGMASLDPEQP HHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC PPSPRPLEELIAESFGSRHLLAALLGFFACVALLLAAGGVYGIMAYSVTQRRTEIGVRMA CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEE LGAREGSIFWLILSQALRLAGLGVIIGSVLALVLARGLSKLLFEVSPADPLVFLGTACVL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LFVALVAGYVPAWRAARVPPSMAMREE HHHHHHHHHCCCHHHCCCCCCCCCCCC >Mature Secondary Structure MDTIRQDIRFGARLLLKSPTFTLVAMMTLALGIGASTAIFSVVNSIWLQPMRFPHEERLV CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEE MVWDSLPKAGVERSETSLATLEDWTAQAGGFEHVAGIVPRSLNMGGALQPERLQAFRVGA EEECCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ALFPALEARPSLGRAFSAEEDRVGGEAVVVLSDALWRRRFGGAPSVLGESVTLDGEPYTV HHHHHHHCCCCCCCCCCCCHHCCCCCEEEEEHHHHHHHHCCCCHHHCCCCEEECCCCEEE VGVMPKSFDFPPGAEAWVPLAPTQAELDARGDRKVRVVGRLKPGFSVSMAEDALRVLAGQ EEECCCCCCCCCCCCCEEECCCCHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHH LAERYPDTDSERTVRLTSVREAYLGPLRPLLITLAGAVGFVLLIGCANVASLLLARAAAR HHHHCCCCCCCCEEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRELAIRGALGASPTRLMVQALTESVLLSLLGGGLGILGALWGTHMIATMLPPGLAERLP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCC GWQSIQVDGGALLFCVGLSAITGVLFGLAPAFQMSRQNPLEAMREGAGATAGRKSIRSAL CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHH VTAEVALALMLVVGASLMLRSLYQLQGTSPGFAAERVFYFDVTLPETRYPTDAERVRFFH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH ALQERLSSIPGAQAVSAASLPPISRRSQSSNIYPDGQPKPLPGQLPEASQRVISPGYFRT HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEE MGIPLHEGRDFNALDVEDSPRVAMINSALARRFWPGESPLGKRFFTGGTEPWEVIGVVGD ECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHH VRTLWRGQVRSSVPEFYLPLAQAPRDAMVMMVTVGGTGAAASSLALSLREGMASLDPEQP HHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC PPSPRPLEELIAESFGSRHLLAALLGFFACVALLLAAGGVYGIMAYSVTQRRTEIGVRMA CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCEEEE LGAREGSIFWLILSQALRLAGLGVIIGSVLALVLARGLSKLLFEVSPADPLVFLGTACVL ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LFVALVAGYVPAWRAARVPPSMAMREE HHHHHHHHHCCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA