| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hly [H]
Identifier: 108762694
GI number: 108762694
Start: 751212
End: 753047
Strand: Direct
Name: hly [H]
Synonym: MXAN_0653
Alternate gene names: 108762694
Gene position: 751212-753047 (Clockwise)
Preceding gene: 108761806
Following gene: 108759191
Centisome position: 8.22
GC content: 68.74
Gene sequence:
>1836_bases GTGGCGGTGACCGTCCTTGGCATTCCTGACCTCCCGTCCTCTCTCCTGGCGCCGTCCCTGGGGCGTCGGGCCGCGTCGCG GCATGTAGCATGTCGGCCGGGGGAGGCGCTGACGCCGCCTCGGGCTGATCGCTGGAAACTTTGTCCGACACAATGCGACA ATCATTTATCGGCGTTTTTTTCTGCCCCCCACGGAGCTCCCCCCACCATGGAAATCTCTCGCAAGCCGAAGTCGCCCGTG TCGCAGTCCACTCGCGCTGGTGACACGGCCAAGCCGGCCGCTGCGGCCAGGCCCGTGGAGAAGGCGCCGGTCCAGACGGC GAAGGATGGCTTCGACTCGGCGCCCACGGGTGGCGCGCGGGGCTCCAACTTCGTGGACCGCCCGAAGGGCAACTTCGTGG ACCGCCCCACGGGCCTGCCCCAGGGCACCCCGTCGGCGCTGCCGGCCTCGGCCTTCACCTTCGGCTCCGGCCACGTCGCC GTCCGTCCCTTCGCGGCGAGCGCGGCCCGCGCGCCCGTGACGCTGACGGCGTCCGCCACGCCCAGCGCGAAGGTGAACGA CCTCCAGACGACGACGTCCACCGTGTCCTTCGACCAGGACGTGAAGCTGGACTCGCTGAAGCTGAACCTGGATCTGGCGC ACACCTTCAAGGGTGACCTGGTCGTCAAGCTGACCAGCCCCTCCGGCAAGACGGAGACGCTCCACAACCGCAAGGGCGGC AGCGCGGACAACATCAAGGGCAGCTTCGACCTGGCCGCCTTCAAGGGCGAGTCCACCAAGGGCACCTGGACGCTCTCGGT CGAGGACAAGGCGCGCCGCGACACGGGCACCCTGAAGAGCTGGAGCCTGGACGCCGCCGGCCAGACGACGGGCACGGGCC CCATCGAGGAGCCGAAGCCCCAGCTCTCCGGCCCGCCGGTCATCGCCGTGTTCGACGGCGGCGTGGACTTCAAGCACTCC GACCTGGATGACGCGATGTGGGTCAACCCGAACGAGGTCGCGGGTGACGGCATCGACAACGACGGCAACGGCGTCAAGGA CGACATCTACGGCTACAACGTCGGCTACAACAGCGGCGACGTGATGCGCGGCAGCGGCACGGACCACGGCACGCACGTGG CCGGCATCATCGCCGCCGAGGACAACGGCGAGGGCAACACCGGCGTCGCCGCGGGCAAGGCGAAGATCATGAGCCTGGGT GGCCTGTACAACGGCGCGGACCTGCTCACGAACTTCGAGCGCGGCGTCGACTACATGGTGAAGATGAAGACCGAGCACGG CGTGAACATCCGCGCCGTCAACGCGAGCTTCGGCAACGAGTACCGTGACGCGGCCTCCGTGAAGCGCTGGACGGACGCGG TGCAGAAGCTGGCTGACGCGGACATCCTCCTCGTCGCGGCCACGGCGAACGGCTACGGCAGCAACCTGAACGACGTGGCG GACATGCCCGCCAACATCGACCTGCCCAACGTCATCACCGTGGCGTCCATGGACAAGAAGAACGACAAGCTCGCGGACTT CTCCTCCTACGGGGACAAGGTCGTGGAGCTGGCCGCGGTGGGTGAGGACGTGCTGAGCACCGTCCCGGGCGGCGGCTGGG AGGAGATGAGCGGCACCTCCATGGCCACCCCGACGGTGGCGGGCGCCGCGGCGCTGATGTTCGCCGAAAACCCCAATCTG ACGGCCGCGCAGGTGCGTGACCTGCTGGTCCAGACGGTGGAGGTGGACTCCGACCTCAAGGGCAAGGTGAGCACCAGCGG CAAGCTGGACATCGAGGCCGCCGTCGCCGCCGCCAAGGCCACGCTCGAGGACGACACCGCGGTCGCCGGGCGCTGA
Upstream 100 bases:
>100_bases CTGTCCGGCGCCCCGGAACTTCACGACGTAGAGCCCTGCGTCGTCCGCCTCGATGATGGCCGGCAGCGAGCCGCCCTCCC GCAGTGGCGTCACGTAGCGC
Downstream 100 bases:
>100_bases GCCGGACCTGAGGTGACGCAGTGAAGAACTCCCGGTGCCCAGGTGCCGGGAGTTTTTTCGTGCCCGATTTGATTGCGCAC AATTTAATTGCGTCCTATTT
Product: S8A family peptidase
Products: NA
Alternate protein names: F-II [H]
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MAVTVLGIPDLPSSLLAPSLGRRAASRHVACRPGEALTPPRADRWKLCPTQCDNHLSAFFSAPHGAPPTMEISRKPKSPV SQSTRAGDTAKPAAAARPVEKAPVQTAKDGFDSAPTGGARGSNFVDRPKGNFVDRPTGLPQGTPSALPASAFTFGSGHVA VRPFAASAARAPVTLTASATPSAKVNDLQTTTSTVSFDQDVKLDSLKLNLDLAHTFKGDLVVKLTSPSGKTETLHNRKGG SADNIKGSFDLAAFKGESTKGTWTLSVEDKARRDTGTLKSWSLDAAGQTTGTGPIEEPKPQLSGPPVIAVFDGGVDFKHS DLDDAMWVNPNEVAGDGIDNDGNGVKDDIYGYNVGYNSGDVMRGSGTDHGTHVAGIIAAEDNGEGNTGVAAGKAKIMSLG GLYNGADLLTNFERGVDYMVKMKTEHGVNIRAVNASFGNEYRDAASVKRWTDAVQKLADADILLVAATANGYGSNLNDVA DMPANIDLPNVITVASMDKKNDKLADFSSYGDKVVELAAVGEDVLSTVPGGGWEEMSGTSMATPTVAGAAALMFAENPNL TAAQVRDLLVQTVEVDSDLKGKVSTSGKLDIEAAVAAAKATLEDDTAVAGR
Sequences:
>Translated_611_residues MAVTVLGIPDLPSSLLAPSLGRRAASRHVACRPGEALTPPRADRWKLCPTQCDNHLSAFFSAPHGAPPTMEISRKPKSPV SQSTRAGDTAKPAAAARPVEKAPVQTAKDGFDSAPTGGARGSNFVDRPKGNFVDRPTGLPQGTPSALPASAFTFGSGHVA VRPFAASAARAPVTLTASATPSAKVNDLQTTTSTVSFDQDVKLDSLKLNLDLAHTFKGDLVVKLTSPSGKTETLHNRKGG SADNIKGSFDLAAFKGESTKGTWTLSVEDKARRDTGTLKSWSLDAAGQTTGTGPIEEPKPQLSGPPVIAVFDGGVDFKHS DLDDAMWVNPNEVAGDGIDNDGNGVKDDIYGYNVGYNSGDVMRGSGTDHGTHVAGIIAAEDNGEGNTGVAAGKAKIMSLG GLYNGADLLTNFERGVDYMVKMKTEHGVNIRAVNASFGNEYRDAASVKRWTDAVQKLADADILLVAATANGYGSNLNDVA DMPANIDLPNVITVASMDKKNDKLADFSSYGDKVVELAAVGEDVLSTVPGGGWEEMSGTSMATPTVAGAAALMFAENPNL TAAQVRDLLVQTVEVDSDLKGKVSTSGKLDIEAAVAAAKATLEDDTAVAGR >Mature_610_residues AVTVLGIPDLPSSLLAPSLGRRAASRHVACRPGEALTPPRADRWKLCPTQCDNHLSAFFSAPHGAPPTMEISRKPKSPVS QSTRAGDTAKPAAAARPVEKAPVQTAKDGFDSAPTGGARGSNFVDRPKGNFVDRPTGLPQGTPSALPASAFTFGSGHVAV RPFAASAARAPVTLTASATPSAKVNDLQTTTSTVSFDQDVKLDSLKLNLDLAHTFKGDLVVKLTSPSGKTETLHNRKGGS ADNIKGSFDLAAFKGESTKGTWTLSVEDKARRDTGTLKSWSLDAAGQTTGTGPIEEPKPQLSGPPVIAVFDGGVDFKHSD LDDAMWVNPNEVAGDGIDNDGNGVKDDIYGYNVGYNSGDVMRGSGTDHGTHVAGIIAAEDNGEGNTGVAAGKAKIMSLGG LYNGADLLTNFERGVDYMVKMKTEHGVNIRAVNASFGNEYRDAASVKRWTDAVQKLADADILLVAATANGYGSNLNDVAD MPANIDLPNVITVASMDKKNDKLADFSSYGDKVVELAAVGEDVLSTVPGGGWEEMSGTSMATPTVAGAAALMFAENPNLT AAQVRDLLVQTVEVDSDLKGKVSTSGKLDIEAAVAAAKATLEDDTAVAGR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR006311 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 63375; Mature: 63244
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTVLGIPDLPSSLLAPSLGRRAASRHVACRPGEALTPPRADRWKLCPTQCDNHLSAFF CEEEEEECCCCCHHHHCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH SAPHGAPPTMEISRKPKSPVSQSTRAGDTAKPAAAARPVEKAPVQTAKDGFDSAPTGGAR CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCHHHHCCCCCCCCCCCC GSNFVDRPKGNFVDRPTGLPQGTPSALPASAFTFGSGHVAVRPFAASAARAPVTLTASAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEECCC PSAKVNDLQTTTSTVSFDQDVKLDSLKLNLDLAHTFKGDLVVKLTSPSGKTETLHNRKGG CCCCCCCCCCCCEEECCCCCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHCCCCC SADNIKGSFDLAAFKGESTKGTWTLSVEDKARRDTGTLKSWSLDAAGQTTGTGPIEEPKP CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC QLSGPPVIAVFDGGVDFKHSDLDDAMWVNPNEVAGDGIDNDGNGVKDDIYGYNVGYNSGD CCCCCCEEEEECCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCC VMRGSGTDHGTHVAGIIAAEDNGEGNTGVAAGKAKIMSLGGLYNGADLLTNFERGVDYMV EEECCCCCCCCEEEEEEEECCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHCCEEEE KMKTEHGVNIRAVNASFGNEYRDAASVKRWTDAVQKLADADILLVAATANGYGSNLNDVA EEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHH DMPANIDLPNVITVASMDKKNDKLADFSSYGDKVVELAAVGEDVLSTVPGGGWEEMSGTS CCCCCCCCCCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHCHHHHHHCCCCCHHHCCCCC MATPTVAGAAALMFAENPNLTAAQVRDLLVQTVEVDSDLKGKVSTSGKLDIEAAVAAAKA CCCCHHHCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHH TLEDDTAVAGR HCCCCCCCCCC >Mature Secondary Structure AVTVLGIPDLPSSLLAPSLGRRAASRHVACRPGEALTPPRADRWKLCPTQCDNHLSAFF EEEEEECCCCCHHHHCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH SAPHGAPPTMEISRKPKSPVSQSTRAGDTAKPAAAARPVEKAPVQTAKDGFDSAPTGGAR CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCHHHHCCCCCCCCCCCC GSNFVDRPKGNFVDRPTGLPQGTPSALPASAFTFGSGHVAVRPFAASAARAPVTLTASAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEECCC PSAKVNDLQTTTSTVSFDQDVKLDSLKLNLDLAHTFKGDLVVKLTSPSGKTETLHNRKGG CCCCCCCCCCCCEEECCCCCCEEEEEEEEEEEEEECCCCEEEEEECCCCCCCHHHCCCCC SADNIKGSFDLAAFKGESTKGTWTLSVEDKARRDTGTLKSWSLDAAGQTTGTGPIEEPKP CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC QLSGPPVIAVFDGGVDFKHSDLDDAMWVNPNEVAGDGIDNDGNGVKDDIYGYNVGYNSGD CCCCCCEEEEECCCCCCCCCCCCCCEECCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCC VMRGSGTDHGTHVAGIIAAEDNGEGNTGVAAGKAKIMSLGGLYNGADLLTNFERGVDYMV EEECCCCCCCCEEEEEEEECCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHCCEEEE KMKTEHGVNIRAVNASFGNEYRDAASVKRWTDAVQKLADADILLVAATANGYGSNLNDVA EEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHH DMPANIDLPNVITVASMDKKNDKLADFSSYGDKVVELAAVGEDVLSTVPGGGWEEMSGTS CCCCCCCCCCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHCHHHHHHCCCCCHHHCCCCC MATPTVAGAAALMFAENPNLTAAQVRDLLVQTVEVDSDLKGKVSTSGKLDIEAAVAAAKA CCCCHHHCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHH TLEDDTAVAGR HCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1732209; 2112401 [H]