| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is trx [H]
Identifier: 108762690
GI number: 108762690
Start: 3095262
End: 3095594
Strand: Reverse
Name: trx [H]
Synonym: MXAN_2652
Alternate gene names: 108762690
Gene position: 3095594-3095262 (Counterclockwise)
Preceding gene: 108762594
Following gene: 108757073
Centisome position: 33.87
GC content: 65.17
Gene sequence:
>333_bases ATGGCAGGCGCGGACGTGACGAACATCGGGGATGGCGATTTCAAGCAGCAGGTCCTGGACTCCCAGGAGCCCGTGCTGGT GGATTTCTGGGCGACGTGGTGCGCGCCGTGCCGCGCCATCGCGCCCTCCATCGAAGCGCTGGCCTCGCAGTACAAGGGGC AGGTGAAGTTCGCCAAGCTCAACATCGATGAGAACCAGGACACGCCGCAGGAGTACGGCATCCGTTCCATCCCCACCCTG CTCCTGTTCAAGGGCGGCCGCGTGGTGGAGCAGATTGTCGGCGCGGTGCCCAAGGCCCGCATCGAAGAGGCGGTGAAGAA GGCCCTGACGTAG
Upstream 100 bases:
>100_bases CTGAGCCGCCAGATTGGCTGATGGCCGGCCGATCCTTGCAGGCCCACCGGACGCGTACTACACGCGGCGGAGGTGCCCGG ACAGGGCACGAGGAGACACC
Downstream 100 bases:
>100_bases ACGCGCCGCGCTGCGGGGTCGGACGCGCGAGAGAGCCCCTGCTGCTCTTCCGCGCCCCTCCCCGCGGCCTCCTCCTGTCT CAGCCCAGCAACTCCACGCA
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAGADVTNIGDGDFKQQVLDSQEPVLVDFWATWCAPCRAIAPSIEALASQYKGQVKFAKLNIDENQDTPQEYGIRSIPTL LLFKGGRVVEQIVGAVPKARIEEAVKKALT
Sequences:
>Translated_110_residues MAGADVTNIGDGDFKQQVLDSQEPVLVDFWATWCAPCRAIAPSIEALASQYKGQVKFAKLNIDENQDTPQEYGIRSIPTL LLFKGGRVVEQIVGAVPKARIEEAVKKALT >Mature_109_residues AGADVTNIGDGDFKQQVLDSQEPVLVDFWATWCAPCRAIAPSIEALASQYKGQVKFAKLNIDENQDTPQEYGIRSIPTLL LFKGGRVVEQIVGAVPKARIEEAVKKALT
Specific function: Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=103, Percent_Identity=39.8058252427184, Blast_Score=90, Evalue=4e-19, Organism=Homo sapiens, GI21361657, Length=126, Percent_Identity=31.7460317460317, Blast_Score=67, Evalue=3e-12, Organism=Homo sapiens, GI5031973, Length=86, Percent_Identity=39.5348837209302, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI87082331, Length=104, Percent_Identity=46.1538461538462, Blast_Score=106, Evalue=3e-25, Organism=Escherichia coli, GI1788936, Length=98, Percent_Identity=41.8367346938776, Blast_Score=97, Evalue=2e-22, Organism=Escherichia coli, GI87081747, Length=111, Percent_Identity=36.036036036036, Blast_Score=74, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17510299, Length=98, Percent_Identity=45.9183673469388, Blast_Score=85, Evalue=6e-18, Organism=Caenorhabditis elegans, GI212646193, Length=108, Percent_Identity=34.2592592592593, Blast_Score=81, Evalue=9e-17, Organism=Caenorhabditis elegans, GI71980565, Length=86, Percent_Identity=38.3720930232558, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71980562, Length=86, Percent_Identity=38.3720930232558, Blast_Score=75, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71998175, Length=87, Percent_Identity=42.5287356321839, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17509965, Length=100, Percent_Identity=38, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17507705, Length=91, Percent_Identity=34.0659340659341, Blast_Score=68, Evalue=9e-13, Organism=Caenorhabditis elegans, GI115532378, Length=81, Percent_Identity=39.5061728395062, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17556044, Length=81, Percent_Identity=35.8024691358025, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17544108, Length=82, Percent_Identity=39.0243902439024, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI115532380, Length=82, Percent_Identity=39.0243902439024, Blast_Score=65, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6321648, Length=81, Percent_Identity=49.3827160493827, Blast_Score=84, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323072, Length=81, Percent_Identity=50.6172839506173, Blast_Score=84, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6319925, Length=91, Percent_Identity=32.967032967033, Blast_Score=70, Evalue=1e-13, Organism=Drosophila melanogaster, GI28573567, Length=97, Percent_Identity=38.1443298969072, Blast_Score=92, Evalue=7e-20, Organism=Drosophila melanogaster, GI24639826, Length=90, Percent_Identity=44.4444444444444, Blast_Score=89, Evalue=5e-19, Organism=Drosophila melanogaster, GI17648013, Length=86, Percent_Identity=40.6976744186046, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI24583090, Length=86, Percent_Identity=40.6976744186046, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI24664269, Length=75, Percent_Identity=42.6666666666667, Blast_Score=75, Evalue=6e-15, Organism=Drosophila melanogaster, GI21358065, Length=82, Percent_Identity=40.2439024390244, Blast_Score=75, Evalue=8e-15, Organism=Drosophila melanogaster, GI24639068, Length=93, Percent_Identity=30.1075268817204, Blast_Score=69, Evalue=5e-13, Organism=Drosophila melanogaster, GI19921434, Length=82, Percent_Identity=35.3658536585366, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11989; Mature: 11858
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGADVTNIGDGDFKQQVLDSQEPVLVDFWATWCAPCRAIAPSIEALASQYKGQVKFAKL CCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE NIDENQDTPQEYGIRSIPTLLLFKGGRVVEQIVGAVPKARIEEAVKKALT ECCCCCCCHHHCCCHHCCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure AGADVTNIGDGDFKQQVLDSQEPVLVDFWATWCAPCRAIAPSIEALASQYKGQVKFAKL CCCCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE NIDENQDTPQEYGIRSIPTLLLFKGGRVVEQIVGAVPKARIEEAVKKALT ECCCCCCCHHHCCCHHCCHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8756494; 8590279; 8905231; 9298645 [H]