| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762646
Identifier: 108762646
GI number: 108762646
Start: 5938148
End: 5940388
Strand: Reverse
Name: 108762646
Synonym: MXAN_4740
Alternate gene names: NA
Gene position: 5940388-5938148 (Counterclockwise)
Preceding gene: 108761344
Following gene: 108763458
Centisome position: 64.99
GC content: 72.24
Gene sequence:
>2241_bases TTGGCCCTGGGTCGCCTACAATCCACTCTCTGGATGATCCGCCTGCCGCTTCTTGCCCTCCTTCTCAGTGGCTTCACGCT TCTGGTGCCCGTCGTGGCGTCCGCGCAGCTGGAAGCCCCCACGCGCCTTCCCGAGGTGGATCCGGGCCCCATGGAGCCCG ACCTGCGGGATGAGTCCATGGATCCGGTGGATGACGCCGCCTACGCGGAGGACGTGCCGGAAGAAGACGTCCCCGCCGCG GAGGATGCCTCCACCGAGGACGCCGACGGCGCGCCCAGGGGGCCCGTGCGCAATGTCAGGGCCGCCGAATCGGTCCCCGC CAATGGCCGGACTCCCGCGGCGGCCAGTCCTCCGCCGGTCGCTGAACCCACGGTCATCACCCCCAGGCCGGTGACGCTGA GTCCGGTGCTGGCGCCGCGGGTGACGGATGCGGACCTGGAGGCCCTCTGGAACCGGTGGCGGCAGGCCCGCGCGACGAAT GATCGAGACGCCGCGGCGGCGTCCCTCAAGGAACTGCGGACATTGCGCGTCGAGCTGGCCGCCACGGACCTGGAGCCCCT GAGCGTGGGCTTCCTCCGCGAAGCGGCCGTGCGTCGCCGCGCGGGGGACATGGCCGGCGCGGTGCGGTTGGCGGAGGTGG CGGTCGAGCTGTCGCCGGGGCTGCCCTACGCGCGCTTCGAGCTCGCGGAGCTCTACGCCTTGGAGAAGCCGGGCGACGTG TCCCGCACGTTGGGGCAGGTGCGGCAGGCACTGGCGACACTGGCGCAGGATGCCCGCTATCGTCGGCCCGCGTTGGCGGA CCTGGGCGCCCTGGTGCTGCTGGCCTGGGGGGCCACCGCGGTGCTGCTGATGGGCTTGTTCTTCCTACGGAAGCTCCGTT ACGCGCTGCATGACTTCCACCATCTGCTGCCGCGAGTCGTCTCCCGGTGGCAGTCCCTGGTCCTGGGGCTGCTGCTCTTG AGCCTGCCGTGGGTGCTGGGGCTGGGCGTGCTGCCCGCGCTGCTGGTGATGCTGGCCACCGTGTCTCTCTATCTCTCGCG CACGGAGCGGATCGTGGCGGCGGTGCTGGTGGCGGGCGTGGGGCTCTTTCCGCTGGCGGCGGGGCAACTCGCGCGTGTCA CGGCGTTCGCGGGCACGCCGGCCGAGGACGTGTACCTCCTGGAGCGGGGCGGCCTGTCCGCCGAGGAGGCGCGGGCGCGC GTACTGGCGCGGATGGAGTCCCGCTCGGCGACGTTCGCGGAGGTGCTGTCGCTGGCGTACTTCGAATCCCGGCGCGGCTT GCTGGAAGAGGCGAGGACTCACTTCAAGGCCGCCTCGGCGCTGAAGAGCTCGGATGCGCGCCTGCTTACGCGCTTCGGCA ACACCCTGGTCGCGCTGGGAGACGCGGAGGGTGCGGCACTGCTCTACGTGCAGGCCTCGCAGTCGGCGCCGGACCTGGCG GCTCCGCACTACAACCTGGCGCAGGTGGTCCGCCGCAGGGCGAAGACGCTGCCGGACTCGGAGGTCGGCAAGGAGCTGGA TCGCGCCGCCACGGCCATGGCCTCGGCGCAGGCGCTGGATGGAACGCTGCTGGTCCGGGACCCGCCGCCGGAGGACCGGC TGCTCCTCAACCTGCTGCTGCTGGCCCCGCAACTGGCGGAATCCGACTGGCTTCCGCTCGCGGATGGCACGGGGGCGGGG CGCCAGGTGGAGACGCAGGTGTCGCGCTGGCTGCTCCCAGGGCTTCCTCCCGGGCCCATGGCCTCCGCGGGGGCCGCGGC GCTGGCGGTGCTGCTGGCCCTGTGGGGCTTCTTGGGGGACCGCTTGAAGGCGGCCAAGGTGTGTGAGCGCTGTGGCCGCG CGGTGTGCGTGCGCTGCGACCCGGAGCTGGGCATCGGCAGCAAGCAATGTGGCCAGTGCGTCAACGTCTTCTCCCGCCGG GGGCTGGTGCCGCAGCAGCTGAGGGCGCGAAAGCAGCTCCAGGTGGACCGGCATCAGGCCTGGACGGGCCGCGTGGCGTA CAGCCTGGGCGCGGTGCTAGCGGGAGCGGGGCACGTGGCCTCGGGTGTGCCGGTCCGCGGCGCGCTGTATGCGTTCGGTT TCCTCTTCGCGCTGGCCGCGGTGCTCCTGCACCAGGGCCTGGTGCGAGGGCCCTACGGTGAAGCCCCCCTCTACCTCAAG CTCGCGCCCGCGGCGTTGCTGCTGCTGGGGGTCCACCTGCTGTCGTTGCGCGGTCTACGCCGTCTGCGGCGGGGGGAGTG A
Upstream 100 bases:
>100_bases AGCGTCGTGTCCGCCATGCACGTTCCTGTAGCACGCACGGGTCTGGTGCTGTCCGGCAAACGCGGCAGGTGGGCAGCCAG GCTGGCGTTCGTTTTCGCGC
Downstream 100 bases:
>100_bases ACGGCGATGTCCCTGCAAGGCACCCTGAAGGACTTTGGTATTGGCGACATCCTGCAGCTCATCGGGCAGCAGCAGAAGAC GGGCACGCTCCACGTCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 746; Mature: 745
Protein sequence:
>746_residues MALGRLQSTLWMIRLPLLALLLSGFTLLVPVVASAQLEAPTRLPEVDPGPMEPDLRDESMDPVDDAAYAEDVPEEDVPAA EDASTEDADGAPRGPVRNVRAAESVPANGRTPAAASPPPVAEPTVITPRPVTLSPVLAPRVTDADLEALWNRWRQARATN DRDAAAASLKELRTLRVELAATDLEPLSVGFLREAAVRRRAGDMAGAVRLAEVAVELSPGLPYARFELAELYALEKPGDV SRTLGQVRQALATLAQDARYRRPALADLGALVLLAWGATAVLLMGLFFLRKLRYALHDFHHLLPRVVSRWQSLVLGLLLL SLPWVLGLGVLPALLVMLATVSLYLSRTERIVAAVLVAGVGLFPLAAGQLARVTAFAGTPAEDVYLLERGGLSAEEARAR VLARMESRSATFAEVLSLAYFESRRGLLEEARTHFKAASALKSSDARLLTRFGNTLVALGDAEGAALLYVQASQSAPDLA APHYNLAQVVRRRAKTLPDSEVGKELDRAATAMASAQALDGTLLVRDPPPEDRLLLNLLLLAPQLAESDWLPLADGTGAG RQVETQVSRWLLPGLPPGPMASAGAAALAVLLALWGFLGDRLKAAKVCERCGRAVCVRCDPELGIGSKQCGQCVNVFSRR GLVPQQLRARKQLQVDRHQAWTGRVAYSLGAVLAGAGHVASGVPVRGALYAFGFLFALAAVLLHQGLVRGPYGEAPLYLK LAPAALLLLGVHLLSLRGLRRLRRGE
Sequences:
>Translated_746_residues MALGRLQSTLWMIRLPLLALLLSGFTLLVPVVASAQLEAPTRLPEVDPGPMEPDLRDESMDPVDDAAYAEDVPEEDVPAA EDASTEDADGAPRGPVRNVRAAESVPANGRTPAAASPPPVAEPTVITPRPVTLSPVLAPRVTDADLEALWNRWRQARATN DRDAAAASLKELRTLRVELAATDLEPLSVGFLREAAVRRRAGDMAGAVRLAEVAVELSPGLPYARFELAELYALEKPGDV SRTLGQVRQALATLAQDARYRRPALADLGALVLLAWGATAVLLMGLFFLRKLRYALHDFHHLLPRVVSRWQSLVLGLLLL SLPWVLGLGVLPALLVMLATVSLYLSRTERIVAAVLVAGVGLFPLAAGQLARVTAFAGTPAEDVYLLERGGLSAEEARAR VLARMESRSATFAEVLSLAYFESRRGLLEEARTHFKAASALKSSDARLLTRFGNTLVALGDAEGAALLYVQASQSAPDLA APHYNLAQVVRRRAKTLPDSEVGKELDRAATAMASAQALDGTLLVRDPPPEDRLLLNLLLLAPQLAESDWLPLADGTGAG RQVETQVSRWLLPGLPPGPMASAGAAALAVLLALWGFLGDRLKAAKVCERCGRAVCVRCDPELGIGSKQCGQCVNVFSRR GLVPQQLRARKQLQVDRHQAWTGRVAYSLGAVLAGAGHVASGVPVRGALYAFGFLFALAAVLLHQGLVRGPYGEAPLYLK LAPAALLLLGVHLLSLRGLRRLRRGE >Mature_745_residues ALGRLQSTLWMIRLPLLALLLSGFTLLVPVVASAQLEAPTRLPEVDPGPMEPDLRDESMDPVDDAAYAEDVPEEDVPAAE DASTEDADGAPRGPVRNVRAAESVPANGRTPAAASPPPVAEPTVITPRPVTLSPVLAPRVTDADLEALWNRWRQARATND RDAAAASLKELRTLRVELAATDLEPLSVGFLREAAVRRRAGDMAGAVRLAEVAVELSPGLPYARFELAELYALEKPGDVS RTLGQVRQALATLAQDARYRRPALADLGALVLLAWGATAVLLMGLFFLRKLRYALHDFHHLLPRVVSRWQSLVLGLLLLS LPWVLGLGVLPALLVMLATVSLYLSRTERIVAAVLVAGVGLFPLAAGQLARVTAFAGTPAEDVYLLERGGLSAEEARARV LARMESRSATFAEVLSLAYFESRRGLLEEARTHFKAASALKSSDARLLTRFGNTLVALGDAEGAALLYVQASQSAPDLAA PHYNLAQVVRRRAKTLPDSEVGKELDRAATAMASAQALDGTLLVRDPPPEDRLLLNLLLLAPQLAESDWLPLADGTGAGR QVETQVSRWLLPGLPPGPMASAGAAALAVLLALWGFLGDRLKAAKVCERCGRAVCVRCDPELGIGSKQCGQCVNVFSRRG LVPQQLRARKQLQVDRHQAWTGRVAYSLGAVLAGAGHVASGVPVRGALYAFGFLFALAAVLLHQGLVRGPYGEAPLYLKL APAALLLLGVHLLSLRGLRRLRRGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79755; Mature: 79624
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGRLQSTLWMIRLPLLALLLSGFTLLVPVVASAQLEAPTRLPEVDPGPMEPDLRDESM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DPVDDAAYAEDVPEEDVPAAEDASTEDADGAPRGPVRNVRAAESVPANGRTPAAASPPPV CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC AEPTVITPRPVTLSPVLAPRVTDADLEALWNRWRQARATNDRDAAAASLKELRTLRVELA CCCCEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ATDLEPLSVGFLREAAVRRRAGDMAGAVRLAEVAVELSPGLPYARFELAELYALEKPGDV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH SRTLGQVRQALATLAQDARYRRPALADLGALVLLAWGATAVLLMGLFFLRKLRYALHDFH HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLLPRVVSRWQSLVLGLLLLSLPWVLGLGVLPALLVMLATVSLYLSRTERIVAAVLVAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFPLAAGQLARVTAFAGTPAEDVYLLERGGLSAEEARARVLARMESRSATFAEVLSLAY HHHHHHCCHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH FESRRGLLEEARTHFKAASALKSSDARLLTRFGNTLVALGDAEGAALLYVQASQSAPDLA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCC APHYNLAQVVRRRAKTLPDSEVGKELDRAATAMASAQALDGTLLVRDPPPEDRLLLNLLL CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH LAPQLAESDWLPLADGTGAGRQVETQVSRWLLPGLPPGPMASAGAAALAVLLALWGFLGD HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RLKAAKVCERCGRAVCVRCDPELGIGSKQCGQCVNVFSRRGLVPQQLRARKQLQVDRHQA HHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH WTGRVAYSLGAVLAGAGHVASGVPVRGALYAFGFLFALAAVLLHQGLVRGPYGEAPLYLK HHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE LAPAALLLLGVHLLSLRGLRRLRRGE HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALGRLQSTLWMIRLPLLALLLSGFTLLVPVVASAQLEAPTRLPEVDPGPMEPDLRDESM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DPVDDAAYAEDVPEEDVPAAEDASTEDADGAPRGPVRNVRAAESVPANGRTPAAASPPPV CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC AEPTVITPRPVTLSPVLAPRVTDADLEALWNRWRQARATNDRDAAAASLKELRTLRVELA CCCCEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ATDLEPLSVGFLREAAVRRRAGDMAGAVRLAEVAVELSPGLPYARFELAELYALEKPGDV HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH SRTLGQVRQALATLAQDARYRRPALADLGALVLLAWGATAVLLMGLFFLRKLRYALHDFH HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLLPRVVSRWQSLVLGLLLLSLPWVLGLGVLPALLVMLATVSLYLSRTERIVAAVLVAGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFPLAAGQLARVTAFAGTPAEDVYLLERGGLSAEEARARVLARMESRSATFAEVLSLAY HHHHHHCCHHHHHHHCCCCCCHHEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH FESRRGLLEEARTHFKAASALKSSDARLLTRFGNTLVALGDAEGAALLYVQASQSAPDLA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCCCC APHYNLAQVVRRRAKTLPDSEVGKELDRAATAMASAQALDGTLLVRDPPPEDRLLLNLLL CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH LAPQLAESDWLPLADGTGAGRQVETQVSRWLLPGLPPGPMASAGAAALAVLLALWGFLGD HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH RLKAAKVCERCGRAVCVRCDPELGIGSKQCGQCVNVFSRRGLVPQQLRARKQLQVDRHQA HHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH WTGRVAYSLGAVLAGAGHVASGVPVRGALYAFGFLFALAAVLLHQGLVRGPYGEAPLYLK HHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE LAPAALLLLGVHLLSLRGLRRLRRGE HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA