| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762572
Identifier: 108762572
GI number: 108762572
Start: 4860652
End: 4861932
Strand: Reverse
Name: 108762572
Synonym: MXAN_3992
Alternate gene names: NA
Gene position: 4861932-4860652 (Counterclockwise)
Preceding gene: 108756854
Following gene: 108763253
Centisome position: 53.2
GC content: 68.54
Gene sequence:
>1281_bases ATGATCGCCCCCCTAGCATCTGACGCGGCGCCCCGCCGGGGTGCGCAGCTCTTCGAGAGGCCCCCCATGAAGCTCCGACC CTTCGCCCACCTGCTCCTGCTGCCGTCTCTCTTGTGGACGTCGTGCCGGTCGCCCGTCGACGAACCGGGCTCCAACCTGC CCGGCAAATGCGAGAGCGAGTCGCCCGTCATCGCGCCGCAGAAGACGGACATCCTCTTCGTCATCGACAACTCCGGATCC ATGGAAGAGGAGCAGAACGCCATCGCCACGGAGCTGCCCGCCTTCCTGGAGGCGCTGAAGGAGGGCAGCGGCGTCTCGCA GGACTTCCGGGTGGGCGTGATCACCACGTCCGTGTACCGGCTGGCCATGTTCCAGGGGCAGACGACACTCCGAGAGTACG CCAAGGAGTCTGGCCGGTTGCAGCGCGTGCCGGATGCGGCGGGCAACCCCACCGACGAGCGCTTCATCGACGGGACGGAT CCGTACGTGCTGGAGAAGTTCCGCCGGCTGGTGATCCAGGGGACGGATGGCAGCGGGCAGGAGACGCCCTTCGAAGCGGT CCGGCTGGCCGTGACGGAGCCGCTGGTGTCGACGCCGGGGGCGGAGAACGGCAACGCCGGCTTCCTGCGCGACGGCGCGC GCCTGCTGGTGGCGGTGGTCACCGACGAGGAAGACTGCAGCACCATCCAGCGCCCTCCGCCGGTGTGGGTGTCCGACGAC ACGTCCATTGACAACTGCAGTGAGCAGTCCCATCTGCTGACGCCGGTGGAGGAGTACTTCGCCACGTTCCAGCAGCTTCG GGATTCAACGGGGGCCTCGCGTCAGGTGCTCTGGGCCACGATTGGTCCGGTGGCGCTGTCCGACAAGCGGGCGGAGCTGA TCCGCGACGCGACACCCGACGGTGTCTTCGTGCGCAACGTCGATTGCCCGACCTCCTACGGTCCCGGCCACCGGCAGCGC GCCATGGCGGAGGCGTTCGACCAGGGGCTCGACAACCTCGATTCCATCTGCCGGGACAACTACCGCGACACCCTGCTGCG CATCGCGGAGCTGGCCACGGTGGCGCAGAGCATCGAGGTGGTGAACCTGCCCGACCCCCGGCTGGTCCAGGTGGAGCTGA CGCGCGCCAATGACGAGGTGGAGCGGTGCTCGGTGGCCGCGGGCGACCTGCGCTACGAGGCCTCCACGGAAGCGTACCCG GCCCGCCTGTTCTTCCAGTCGAGCTGCCTGCGCCGCGCGGACGACAAGAAGGTGGAAGTGAAGGTCCTCTGCGCCGGCTG A
Upstream 100 bases:
>100_bases ACAACCAAAACGGACATGGCAAACGCAGTGTGCGTTTTTCCGCCCCCCGTCACCTCTCCAGGGTTCCTCGGAAGTCTCGC GTCCGGACGTAGGGTGGGGC
Downstream 100 bases:
>100_bases TGCCCGGGTGAACCCGCACCAGCGGGTCTGATCCACGCACCCACCGCCATGCGTCCCATGAAGGCGCATGTCAGACCTCC GAGGATAGTGGACGACCGCC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MIAPLASDAAPRRGAQLFERPPMKLRPFAHLLLLPSLLWTSCRSPVDEPGSNLPGKCESESPVIAPQKTDILFVIDNSGS MEEEQNAIATELPAFLEALKEGSGVSQDFRVGVITTSVYRLAMFQGQTTLREYAKESGRLQRVPDAAGNPTDERFIDGTD PYVLEKFRRLVIQGTDGSGQETPFEAVRLAVTEPLVSTPGAENGNAGFLRDGARLLVAVVTDEEDCSTIQRPPPVWVSDD TSIDNCSEQSHLLTPVEEYFATFQQLRDSTGASRQVLWATIGPVALSDKRAELIRDATPDGVFVRNVDCPTSYGPGHRQR AMAEAFDQGLDNLDSICRDNYRDTLLRIAELATVAQSIEVVNLPDPRLVQVELTRANDEVERCSVAAGDLRYEASTEAYP ARLFFQSSCLRRADDKKVEVKVLCAG
Sequences:
>Translated_426_residues MIAPLASDAAPRRGAQLFERPPMKLRPFAHLLLLPSLLWTSCRSPVDEPGSNLPGKCESESPVIAPQKTDILFVIDNSGS MEEEQNAIATELPAFLEALKEGSGVSQDFRVGVITTSVYRLAMFQGQTTLREYAKESGRLQRVPDAAGNPTDERFIDGTD PYVLEKFRRLVIQGTDGSGQETPFEAVRLAVTEPLVSTPGAENGNAGFLRDGARLLVAVVTDEEDCSTIQRPPPVWVSDD TSIDNCSEQSHLLTPVEEYFATFQQLRDSTGASRQVLWATIGPVALSDKRAELIRDATPDGVFVRNVDCPTSYGPGHRQR AMAEAFDQGLDNLDSICRDNYRDTLLRIAELATVAQSIEVVNLPDPRLVQVELTRANDEVERCSVAAGDLRYEASTEAYP ARLFFQSSCLRRADDKKVEVKVLCAG >Mature_426_residues MIAPLASDAAPRRGAQLFERPPMKLRPFAHLLLLPSLLWTSCRSPVDEPGSNLPGKCESESPVIAPQKTDILFVIDNSGS MEEEQNAIATELPAFLEALKEGSGVSQDFRVGVITTSVYRLAMFQGQTTLREYAKESGRLQRVPDAAGNPTDERFIDGTD PYVLEKFRRLVIQGTDGSGQETPFEAVRLAVTEPLVSTPGAENGNAGFLRDGARLLVAVVTDEEDCSTIQRPPPVWVSDD TSIDNCSEQSHLLTPVEEYFATFQQLRDSTGASRQVLWATIGPVALSDKRAELIRDATPDGVFVRNVDCPTSYGPGHRQR AMAEAFDQGLDNLDSICRDNYRDTLLRIAELATVAQSIEVVNLPDPRLVQVELTRANDEVERCSVAAGDLRYEASTEAYP ARLFFQSSCLRRADDKKVEVKVLCAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46733; Mature: 46733
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAPLASDAAPRRGAQLFERPPMKLRPFAHLLLLPSLLWTSCRSPVDEPGSNLPGKCESE CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SPVIAPQKTDILFVIDNSGSMEEEQNAIATELPAFLEALKEGSGVSQDFRVGVITTSVYR CCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHH LAMFQGQTTLREYAKESGRLQRVPDAAGNPTDERFIDGTDPYVLEKFRRLVIQGTDGSGQ HHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCC ETPFEAVRLAVTEPLVSTPGAENGNAGFLRDGARLLVAVVTDEEDCSTIQRPPPVWVSDD CCHHHHHHHHHHCCHHCCCCCCCCCCCEEECCCEEEEEEEECCHHHHHCCCCCCEEECCC TSIDNCSEQSHLLTPVEEYFATFQQLRDSTGASRQVLWATIGPVALSDKRAELIRDATPD CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCHHHHHHHCCCCC GVFVRNVDCPTSYGPGHRQRAMAEAFDQGLDNLDSICRDNYRDTLLRIAELATVAQSIEV CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEE VNLPDPRLVQVELTRANDEVERCSVAAGDLRYEASTEAYPARLFFQSSCLRRADDKKVEV EECCCCCEEEEEEECCCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE KVLCAG EEEECC >Mature Secondary Structure MIAPLASDAAPRRGAQLFERPPMKLRPFAHLLLLPSLLWTSCRSPVDEPGSNLPGKCESE CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SPVIAPQKTDILFVIDNSGSMEEEQNAIATELPAFLEALKEGSGVSQDFRVGVITTSVYR CCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHH LAMFQGQTTLREYAKESGRLQRVPDAAGNPTDERFIDGTDPYVLEKFRRLVIQGTDGSGQ HHHHCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCC ETPFEAVRLAVTEPLVSTPGAENGNAGFLRDGARLLVAVVTDEEDCSTIQRPPPVWVSDD CCHHHHHHHHHHCCHHCCCCCCCCCCCEEECCCEEEEEEEECCHHHHHCCCCCCEEECCC TSIDNCSEQSHLLTPVEEYFATFQQLRDSTGASRQVLWATIGPVALSDKRAELIRDATPD CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEECCHHHHHHHCCCCC GVFVRNVDCPTSYGPGHRQRAMAEAFDQGLDNLDSICRDNYRDTLLRIAELATVAQSIEV CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCEE VNLPDPRLVQVELTRANDEVERCSVAAGDLRYEASTEAYPARLFFQSSCLRRADDKKVEV EECCCCCEEEEEEECCCCHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE KVLCAG EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA