| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762505
Identifier: 108762505
GI number: 108762505
Start: 6181301
End: 6182353
Strand: Direct
Name: 108762505
Synonym: MXAN_4939
Alternate gene names: NA
Gene position: 6181301-6182353 (Clockwise)
Preceding gene: 108760884
Following gene: 108763161
Centisome position: 67.63
GC content: 64.58
Gene sequence:
>1053_bases ATGCCAGCTGAACCCCACAGCACCGCCAGTTACTCGGAGGAGGTCATTCCTTTCCTAGCGGGTGACGGGCGTGCGTTGCA CCTGATCCGCATCCGCGGTGATGCAAAGCCGAACAAGGGGCCAGTCGTCTTGGTGCACGGCGCGGGCGTCCGTAGCAACA TCTTCCGCGCGCCGGTACGGCAGACGCTCGTCGACGCGCTCGTGGCCGACGGATACGACGTGTGGCTAGAGAACTGGCGC GCCAGCATCGACGTTGAGCCCAGCGAGTGGACGCTCGACCAGGCGGCCGTCCTGGACCACCCGGCTGCCATCCGCACGGT GGTGCGCGAATCCGGGCACGACACCGTCAAGGCCATCATCCACTGCCAGGGCTCATGCAGTTTCGCCATGGCCGCGGTGT CCGGGCTGCTTCCTGAAGTAGACGTCATCGTCACCAACGCCGTGTCTCTTCACCCAGTGGTACCCCACGCGGCTGCGTTG AAGCTGAAGCTCGCCGTCGCTCCGGTGGCCAGGCTGACGCCTTACCTGGATCCACAGTGGGCCTTTGGCCCGCCCACGCT GACAGCCAGGCTTCTCACGCTCCTGGTCCGAGCCTTCCACCATGAGTGCACCAACCTGGTGTGCCGCTGGTCCAGCTTCA CCTATGGCGTCGGGTTTCCCGTGCTCTGGCGCCACGAGAACCTCAATTCCGAGACGCACGACTGGCTCCAGCAGGAGTTC GCCAAGGTCCCCCTCACATTCTTCCACCAGATGTCCGAGTGCGTGCGCGCAGGACACCTGGTGCCTGTGGAGGGCTTCCA GGCGTTGCCAGAGGACCTGGCAGTGCGTGAGCCGGAGACGGACGCACGCTTCGTCTTCCTTGCCGGTGAGCAGAATCGCT GCTTCCTCTCGGAGAGTCAGCGCCGCAGCTTCGAGCACCTGGAGCGATTCCGTCCCGGCTACCACATGCTGCATCTGGTC CCCGGTTACGGCCACCTGGACATGTTCATGGGCCAGGACGCCTCCCGTGATGTTTTCCCCCTCATCCTCGCCGAACTCGA CAAACCGGTGTGA
Upstream 100 bases:
>100_bases TTGAGCAGAGCCCCCCTGACCCACGTCATGCGGCCAGGAGGAATCAGGTGGCGGCCGCCACGTCGGCCGCCGTTCTGCTC GAGCAGGGAGGAGTGGCGCC
Downstream 100 bases:
>100_bases AGGAGCGCCGCCATGTTGTTCCGCCTGCCCAGCCGCATCCAGGCACAGTCCGGCCGTTACTCGCGCGTGGACGGCATCCC CTACACGCTGCCTATCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Glucose-Methanol-Choline Oxidoreductase; AB-Hydrolase Associated Lipase Region; Cholesterol Oxidase
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPAEPHSTASYSEEVIPFLAGDGRALHLIRIRGDAKPNKGPVVLVHGAGVRSNIFRAPVRQTLVDALVADGYDVWLENWR ASIDVEPSEWTLDQAAVLDHPAAIRTVVRESGHDTVKAIIHCQGSCSFAMAAVSGLLPEVDVIVTNAVSLHPVVPHAAAL KLKLAVAPVARLTPYLDPQWAFGPPTLTARLLTLLVRAFHHECTNLVCRWSSFTYGVGFPVLWRHENLNSETHDWLQQEF AKVPLTFFHQMSECVRAGHLVPVEGFQALPEDLAVREPETDARFVFLAGEQNRCFLSESQRRSFEHLERFRPGYHMLHLV PGYGHLDMFMGQDASRDVFPLILAELDKPV
Sequences:
>Translated_350_residues MPAEPHSTASYSEEVIPFLAGDGRALHLIRIRGDAKPNKGPVVLVHGAGVRSNIFRAPVRQTLVDALVADGYDVWLENWR ASIDVEPSEWTLDQAAVLDHPAAIRTVVRESGHDTVKAIIHCQGSCSFAMAAVSGLLPEVDVIVTNAVSLHPVVPHAAAL KLKLAVAPVARLTPYLDPQWAFGPPTLTARLLTLLVRAFHHECTNLVCRWSSFTYGVGFPVLWRHENLNSETHDWLQQEF AKVPLTFFHQMSECVRAGHLVPVEGFQALPEDLAVREPETDARFVFLAGEQNRCFLSESQRRSFEHLERFRPGYHMLHLV PGYGHLDMFMGQDASRDVFPLILAELDKPV >Mature_349_residues PAEPHSTASYSEEVIPFLAGDGRALHLIRIRGDAKPNKGPVVLVHGAGVRSNIFRAPVRQTLVDALVADGYDVWLENWRA SIDVEPSEWTLDQAAVLDHPAAIRTVVRESGHDTVKAIIHCQGSCSFAMAAVSGLLPEVDVIVTNAVSLHPVVPHAAALK LKLAVAPVARLTPYLDPQWAFGPPTLTARLLTLLVRAFHHECTNLVCRWSSFTYGVGFPVLWRHENLNSETHDWLQQEFA KVPLTFFHQMSECVRAGHLVPVEGFQALPEDLAVREPETDARFVFLAGEQNRCFLSESQRRSFEHLERFRPGYHMLHLVP GYGHLDMFMGQDASRDVFPLILAELDKPV
Specific function: Unknown
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38961; Mature: 38830
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAEPHSTASYSEEVIPFLAGDGRALHLIRIRGDAKPNKGPVVLVHGAGVRSNIFRAPVR CCCCCCCCCCCHHHCCCEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHH QTLVDALVADGYDVWLENWRASIDVEPSEWTLDQAAVLDHPAAIRTVVRESGHDTVKAII HHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHCCCHHEEEEE HCQGSCSFAMAAVSGLLPEVDVIVTNAVSLHPVVPHAAALKLKLAVAPVARLTPYLDPQW EECCCCHHHHHHHHHCCCCCEEEEECCEEECCCCCCHHHEEEEEHHHHHHHHCCCCCCCC AFGPPTLTARLLTLLVRAFHHECTNLVCRWSSFTYGVGFPVLWRHENLNSETHDWLQQEF CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCEEEECCCCCCHHHHHHHHHH AKVPLTFFHQMSECVRAGHLVPVEGFQALPEDLAVREPETDARFVFLAGEQNRCFLSESQ HHCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCCCCCCEEEEEECCCCCEECCHHH RRSFEHLERFRPGYHMLHLVPGYGHLDMFMGQDASRDVFPLILAELDKPV HHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure PAEPHSTASYSEEVIPFLAGDGRALHLIRIRGDAKPNKGPVVLVHGAGVRSNIFRAPVR CCCCCCCCCCHHHCCCEEECCCCEEEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHH QTLVDALVADGYDVWLENWRASIDVEPSEWTLDQAAVLDHPAAIRTVVRESGHDTVKAII HHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHCCCHHEEEEE HCQGSCSFAMAAVSGLLPEVDVIVTNAVSLHPVVPHAAALKLKLAVAPVARLTPYLDPQW EECCCCHHHHHHHHHCCCCCEEEEECCEEECCCCCCHHHEEEEEHHHHHHHHCCCCCCCC AFGPPTLTARLLTLLVRAFHHECTNLVCRWSSFTYGVGFPVLWRHENLNSETHDWLQQEF CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECCCCCEEEECCCCCCHHHHHHHHHH AKVPLTFFHQMSECVRAGHLVPVEGFQALPEDLAVREPETDARFVFLAGEQNRCFLSESQ HHCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCCCCCCEEEEEECCCCCEECCHHH RRSFEHLERFRPGYHMLHLVPGYGHLDMFMGQDASRDVFPLILAELDKPV HHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA