| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762439
Identifier: 108762439
GI number: 108762439
Start: 1406984
End: 1408183
Strand: Direct
Name: 108762439
Synonym: MXAN_1200
Alternate gene names: NA
Gene position: 1406984-1408183 (Clockwise)
Preceding gene: 108764094
Following gene: 108762813
Centisome position: 15.39
GC content: 58.08
Gene sequence:
>1200_bases GTGTCCACAGGTGGCGCGAAGTGGATTGGCAGGTGGGATGGTGGTCGAGTTCGACTGACCCGAGGGCGGTCCGTGTGGGT CATCGAGCGGAGGGTCAACGGTATCGTTCGGGCCATCACTCTGGACGTCGCCAGCGAGCGCGACGCTCGTGCCGAGCTGG TTCTTTTCGAGCGCGACCCGGGGGCCTACAAGACCAAGAAGCAGGTTGCAGCAGAGGCTGCGGCGTCCGTCGCCCAAGCA GAAAAGAAGGGCGTTGCGCTGGACGAAGAGACCTTCGAGGCGTTTCTCAGGAACGTGAAGGCGGAGGGCCTGACGGACCG TTACCGTCGCTACATCCTTGCCCCCTATTTGACCGCCTGGGGAGTGGCACTTGAGAAAAGGCCACTGCGAGACGTGTCTC TCACTGAGTTGCACGTAATGTTGGACAAATGGCCAACTGCACGGACCCCCCGGATTATCGCATTAAAGGCTTTTACGGCT TGGCTCCGAGAGAGGGATATGCTTCGGCTTGCCGAGGACCCCACGGCTGAGCTGAAGGTTCCCCCTTCAAAGGCTGAAAA GAGCATTCGCCAAAAGGGGTACAGCATGGCTGCGGTAGAGCAGGCTTATGCTGAAGCAAACAGTCAACGCCTTAGAGACA CGTTGTGTCTACGTGCCAAGACGGGGATGCATGGAACCGAGATTGACCGAGTGGCGCGCGGGGATGCGATTCTAAAGGAC GTGAGCGACCCCTGTGGAATCAAGGGGACCATTACTTTTCGGCAGCTCAAGGCGGACATGACGCATACGATCAGTCTGGA TGCTCAAGCGTTCGCTGCGGTGGAGAGGCTTCAGGCATTCGGGAAGGGCCTGGAAGACTCTGGTATCGTCCAGTCTCTTC GCCGCATCGCGGAGCGACTTAAGCTGACGTGTGTAGACGAGGAGCAGCGGAAGAAGATCGTTCCCCTTCATCCGAGCCAG TTAAGGCATAGCTTTTCGACGTGGGCTCGCAAGTACGGAGAGCTTGTGCGGCCGACGGGCAAAGGGCTCCCCATCGAAGA GGTCTCGGCCGTTATGGGGCACACGAGCGTCAAGACGACGAAGAAGTTCTATTTGACGGAAGAGGTTCCCCCAATGATTC GACTCCCTCTTCAACTCGTTCATCAAGAAGACCCCTCGACAGACCGTATTACTTCGCGAAAAGCGGCTTCAATCGACTGA
Upstream 100 bases:
>100_bases GCGAGGTTGGGGTGGTCCTCGTACTTGAAGGGGCATACTTCCGAGTCAGATGGTGATGAAATCAGCCGTCTAACAACGGG ATAACAACATCGGAGGAAGT
Downstream 100 bases:
>100_bases GTTCGCCGCGTTGGCGTTTGCCGCTTTCGATGAGGAGCTGTCTCTCTCTCTTTGTCGACGTCAAGGCATGAGAGGACCGA ATCGAGCCGCACCGTCGCCT
Product: phage integrase family site specific recombinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSTGGAKWIGRWDGGRVRLTRGRSVWVIERRVNGIVRAITLDVASERDARAELVLFERDPGAYKTKKQVAAEAAASVAQA EKKGVALDEETFEAFLRNVKAEGLTDRYRRYILAPYLTAWGVALEKRPLRDVSLTELHVMLDKWPTARTPRIIALKAFTA WLRERDMLRLAEDPTAELKVPPSKAEKSIRQKGYSMAAVEQAYAEANSQRLRDTLCLRAKTGMHGTEIDRVARGDAILKD VSDPCGIKGTITFRQLKADMTHTISLDAQAFAAVERLQAFGKGLEDSGIVQSLRRIAERLKLTCVDEEQRKKIVPLHPSQ LRHSFSTWARKYGELVRPTGKGLPIEEVSAVMGHTSVKTTKKFYLTEEVPPMIRLPLQLVHQEDPSTDRITSRKAASID
Sequences:
>Translated_399_residues MSTGGAKWIGRWDGGRVRLTRGRSVWVIERRVNGIVRAITLDVASERDARAELVLFERDPGAYKTKKQVAAEAAASVAQA EKKGVALDEETFEAFLRNVKAEGLTDRYRRYILAPYLTAWGVALEKRPLRDVSLTELHVMLDKWPTARTPRIIALKAFTA WLRERDMLRLAEDPTAELKVPPSKAEKSIRQKGYSMAAVEQAYAEANSQRLRDTLCLRAKTGMHGTEIDRVARGDAILKD VSDPCGIKGTITFRQLKADMTHTISLDAQAFAAVERLQAFGKGLEDSGIVQSLRRIAERLKLTCVDEEQRKKIVPLHPSQ LRHSFSTWARKYGELVRPTGKGLPIEEVSAVMGHTSVKTTKKFYLTEEVPPMIRLPLQLVHQEDPSTDRITSRKAASID >Mature_398_residues STGGAKWIGRWDGGRVRLTRGRSVWVIERRVNGIVRAITLDVASERDARAELVLFERDPGAYKTKKQVAAEAAASVAQAE KKGVALDEETFEAFLRNVKAEGLTDRYRRYILAPYLTAWGVALEKRPLRDVSLTELHVMLDKWPTARTPRIIALKAFTAW LRERDMLRLAEDPTAELKVPPSKAEKSIRQKGYSMAAVEQAYAEANSQRLRDTLCLRAKTGMHGTEIDRVARGDAILKDV SDPCGIKGTITFRQLKADMTHTISLDAQAFAAVERLQAFGKGLEDSGIVQSLRRIAERLKLTCVDEEQRKKIVPLHPSQL RHSFSTWARKYGELVRPTGKGLPIEEVSAVMGHTSVKTTKKFYLTEEVPPMIRLPLQLVHQEDPSTDRITSRKAASID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44738; Mature: 44607
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGGAKWIGRWDGGRVRLTRGRSVWVIERRVNGIVRAITLDVASERDARAELVLFERDP CCCCCCCEEEECCCCEEEEECCCEEEEEEHHHHHHHHHEEEECCCCCCCCEEEEEEECCC GAYKTKKQVAAEAAASVAQAEKKGVALDEETFEAFLRNVKAEGLTDRYRRYILAPYLTAW CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GVALEKRPLRDVSLTELHVMLDKWPTARTPRIIALKAFTAWLRERDMLRLAEDPTAELKV HHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEC PPSKAEKSIRQKGYSMAAVEQAYAEANSQRLRDTLCLRAKTGMHGTEIDRVARGDAILKD CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHH VSDPCGIKGTITFRQLKADMTHTISLDAQAFAAVERLQAFGKGLEDSGIVQSLRRIAERL CCCCCCCEEEEEHHHHHHCCHHEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KLTCVDEEQRKKIVPLHPSQLRHSFSTWARKYGELVRPTGKGLPIEEVSAVMGHTSVKTT EEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHH KKFYLTEEVPPMIRLPLQLVHQEDPSTDRITSRKAASID HEEEEECCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCC >Mature Secondary Structure STGGAKWIGRWDGGRVRLTRGRSVWVIERRVNGIVRAITLDVASERDARAELVLFERDP CCCCCCEEEECCCCEEEEECCCEEEEEEHHHHHHHHHEEEECCCCCCCCEEEEEEECCC GAYKTKKQVAAEAAASVAQAEKKGVALDEETFEAFLRNVKAEGLTDRYRRYILAPYLTAW CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GVALEKRPLRDVSLTELHVMLDKWPTARTPRIIALKAFTAWLRERDMLRLAEDPTAELKV HHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEC PPSKAEKSIRQKGYSMAAVEQAYAEANSQRLRDTLCLRAKTGMHGTEIDRVARGDAILKD CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHH VSDPCGIKGTITFRQLKADMTHTISLDAQAFAAVERLQAFGKGLEDSGIVQSLRRIAERL CCCCCCCEEEEEHHHHHHCCHHEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KLTCVDEEQRKKIVPLHPSQLRHSFSTWARKYGELVRPTGKGLPIEEVSAVMGHTSVKTT EEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHH KKFYLTEEVPPMIRLPLQLVHQEDPSTDRITSRKAASID HEEEEECCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA