| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108762438
Identifier: 108762438
GI number: 108762438
Start: 3800671
End: 3802773
Strand: Reverse
Name: 108762438
Synonym: MXAN_3248
Alternate gene names: NA
Gene position: 3802773-3800671 (Counterclockwise)
Preceding gene: 108763212
Following gene: 108761620
Centisome position: 41.61
GC content: 68.71
Gene sequence:
>2103_bases ATGGCACGCATCTCACTGACGGCCAGTGTCGCCCTCGCTGCGCCCGGAGGACGCAACCGCAACCGCCTCCGTCCCGCCAG TCATGGCATCGCAGACTTCCGGCTCCGCAGCCCTGGAGGTCCCCAATCCCGCTGCCACCGCCCGGTTCCCTTCCCCGCGC TGACAGGGGGTGATGACGGCTTCCACTTCGCGCCCGAAGTCGAGCCCGTGGAGTTGACGTGGCGTCTGCTCAACACGAGC GGGCTGGTGCGCGCTGGAAAGCTGGAGCTCTTCACGCGCTACCGCAAGGCGCCGCTGTGGTCGCGCGAGCTGAGCCGCGA GGAACTCCTCCAAGGCGAGCACCGATGGGCATGGGATGGCCGCGTGCCCGAGTCGGAGACATCCCCGGATGGCGTCGTCA CGGTGGAGCACTCGCCATACAAGCTGAAGCTGACGCTCCAAGGCAGTGGACTGGCGCAGGCGCCCGTGGCGTGGACGTTC TTCCACGTCCTGGTGGCGGGCGTTGACCTGGAGCTGGGTGAGCCCCGGGTGCTCTCGCGACCACGCGACCGTGAGCTGAC CCAGTCGTTGAAGCGGCTCCCCGCGCCCGACGAGAAGGCCGAAATCCGGCTGGTCGGGAACGTCTTCAAGACAAAGCCGT CGGAGATGTCCGATGACACGGACCACCAACTGCACCGCAAACACTGGGGTAGCGGACCGGAGCTTCCGCTGTTCGCCCGA GCCTGGCTGAAGGACTCGCGCGGCAACCGGGTAGATGCGCCGAAGGCCCTGGGCCGCGTGCGCTTCCTCTGGGACTGGGA GGACGAGACAGAGGCCATCGAACACCATGCCCCCACGGCCCGGGCCTTCCTCAAACATGCGCTGGACCGTCACTGTTCGA CGTCACAACCCAAGGGCGACAACGCGCACCGGGACGTGGGCGGCAAGCGCGGTGCGCCGTCGCTTGCGGTGTTTCCCAGA CAGGCCGGCTACGCGCCCCAGGCCGAGCCCCGTGACGGCGCCTTCCCCTTCCGCGTCACGCCCTGCAACAAGCGCGGTTG GGCGGCCTACAGCCAGGCGTGGACCACAGGGGCTTTCGCGGGACGCACGGGCGTGGTGTTCCAGCCTTCCAGCATCGCGG GAGACGCCTGGCGAGTCACAGTGCAGCTTGCCTATGACCGCCGAAAGGATGGCGGCGTGGTGCTGGACGTGGACGATGAT GGACCGCTGCCCGCCGCCGTGCGCGCCGCCACCGGCGTCTTCGAATCCTGGCGCGAGGTCCACATCTCCCGCCTCTTGTG CAAGGACACGGGCGCCTCCGGGTTCTCGCTCTCCGCCGTGCAGGGCCATTTCGAACAAGCCTTTCTGCGCCTGGAGGACC GCACGGGCGGCGTCTCGGGATGGTGCGCACGGGAATACAACGCGTGCATCGCAGAGGCCGTGGCGGCATCCCGGCACTGG GAGCTCCGGGCTGCCATCGACCCTGCGGTGGACCAGTTCGCCGCAGGCGGCCACGCGCTCACCTTCCGCACTCACGCGGA ATTCCTGGCCGAGGTGAAGCGCGTGAAGCACTGCGGCGATGCGGACCTCCCCCGGTGGCTGGCGCCCACGCGAGAGCGCA GGCTGCCCCTGCTGGAGGCTCGCGAGTACCACCGGCAGTGCAAAGACTGGGCAAAGGCACTGCTCACCCGGGCGCTGGAC TCGGCGCTGGGGACGGCTGCGGGCATCGCGCTCTTCCAGTTCTCCGGGCTCTACAACCTGGAGACGACGGTCGGCGGCAT TCGCGTGAACGGTTTCGCGTCGGAGTTCCCCTCGCGGAAGCGGGACCGCTGCGCCGTCATCCAATGCGCCGCGCCGGGCA ACTACCGAAACGGCTTCAACTCGCTGGAACAAACGCTGGCGCATGAAATCGGGCACCAGCTCTTCCTGCCGCATGCCCCC TTCCCCGCGCACCGTGAGATTGGCGGCGCCCAGGCGAAGCGCCACGACGTCGACGGGAAGGACTGCCTGATGGGCTACGA CTTCACGACGGAGCGGCGCTTCTGTGGGCTCTGTCTCCTGCGCCTGCGGGGATGGAACACCCACGCCCTGGACCGCGACG GTGCCCGGAACGCGCGGCCATGA
Upstream 100 bases:
>100_bases TGCGAGCGTTCCAGCGCCGCCATGGCCTGCCGGAAACGGGACAGCTCGCGGACATCTCCCGCGAACTCATCCGCCTGCAC GACGCCTGAGGCCACCACCC
Downstream 100 bases:
>100_bases GCGCCTCCGTCCTCTCCGGGCCGTGGCTGCTCGTGCTGACCCTGTCGGCGGCGAACCCCGTCCCCACGCCGTCCCAGGTC AAGACGGCACCGTCCCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 700; Mature: 699
Protein sequence:
>700_residues MARISLTASVALAAPGGRNRNRLRPASHGIADFRLRSPGGPQSRCHRPVPFPALTGGDDGFHFAPEVEPVELTWRLLNTS GLVRAGKLELFTRYRKAPLWSRELSREELLQGEHRWAWDGRVPESETSPDGVVTVEHSPYKLKLTLQGSGLAQAPVAWTF FHVLVAGVDLELGEPRVLSRPRDRELTQSLKRLPAPDEKAEIRLVGNVFKTKPSEMSDDTDHQLHRKHWGSGPELPLFAR AWLKDSRGNRVDAPKALGRVRFLWDWEDETEAIEHHAPTARAFLKHALDRHCSTSQPKGDNAHRDVGGKRGAPSLAVFPR QAGYAPQAEPRDGAFPFRVTPCNKRGWAAYSQAWTTGAFAGRTGVVFQPSSIAGDAWRVTVQLAYDRRKDGGVVLDVDDD GPLPAAVRAATGVFESWREVHISRLLCKDTGASGFSLSAVQGHFEQAFLRLEDRTGGVSGWCAREYNACIAEAVAASRHW ELRAAIDPAVDQFAAGGHALTFRTHAEFLAEVKRVKHCGDADLPRWLAPTRERRLPLLEAREYHRQCKDWAKALLTRALD SALGTAAGIALFQFSGLYNLETTVGGIRVNGFASEFPSRKRDRCAVIQCAAPGNYRNGFNSLEQTLAHEIGHQLFLPHAP FPAHREIGGAQAKRHDVDGKDCLMGYDFTTERRFCGLCLLRLRGWNTHALDRDGARNARP
Sequences:
>Translated_700_residues MARISLTASVALAAPGGRNRNRLRPASHGIADFRLRSPGGPQSRCHRPVPFPALTGGDDGFHFAPEVEPVELTWRLLNTS GLVRAGKLELFTRYRKAPLWSRELSREELLQGEHRWAWDGRVPESETSPDGVVTVEHSPYKLKLTLQGSGLAQAPVAWTF FHVLVAGVDLELGEPRVLSRPRDRELTQSLKRLPAPDEKAEIRLVGNVFKTKPSEMSDDTDHQLHRKHWGSGPELPLFAR AWLKDSRGNRVDAPKALGRVRFLWDWEDETEAIEHHAPTARAFLKHALDRHCSTSQPKGDNAHRDVGGKRGAPSLAVFPR QAGYAPQAEPRDGAFPFRVTPCNKRGWAAYSQAWTTGAFAGRTGVVFQPSSIAGDAWRVTVQLAYDRRKDGGVVLDVDDD GPLPAAVRAATGVFESWREVHISRLLCKDTGASGFSLSAVQGHFEQAFLRLEDRTGGVSGWCAREYNACIAEAVAASRHW ELRAAIDPAVDQFAAGGHALTFRTHAEFLAEVKRVKHCGDADLPRWLAPTRERRLPLLEAREYHRQCKDWAKALLTRALD SALGTAAGIALFQFSGLYNLETTVGGIRVNGFASEFPSRKRDRCAVIQCAAPGNYRNGFNSLEQTLAHEIGHQLFLPHAP FPAHREIGGAQAKRHDVDGKDCLMGYDFTTERRFCGLCLLRLRGWNTHALDRDGARNARP >Mature_699_residues ARISLTASVALAAPGGRNRNRLRPASHGIADFRLRSPGGPQSRCHRPVPFPALTGGDDGFHFAPEVEPVELTWRLLNTSG LVRAGKLELFTRYRKAPLWSRELSREELLQGEHRWAWDGRVPESETSPDGVVTVEHSPYKLKLTLQGSGLAQAPVAWTFF HVLVAGVDLELGEPRVLSRPRDRELTQSLKRLPAPDEKAEIRLVGNVFKTKPSEMSDDTDHQLHRKHWGSGPELPLFARA WLKDSRGNRVDAPKALGRVRFLWDWEDETEAIEHHAPTARAFLKHALDRHCSTSQPKGDNAHRDVGGKRGAPSLAVFPRQ AGYAPQAEPRDGAFPFRVTPCNKRGWAAYSQAWTTGAFAGRTGVVFQPSSIAGDAWRVTVQLAYDRRKDGGVVLDVDDDG PLPAAVRAATGVFESWREVHISRLLCKDTGASGFSLSAVQGHFEQAFLRLEDRTGGVSGWCAREYNACIAEAVAASRHWE LRAAIDPAVDQFAAGGHALTFRTHAEFLAEVKRVKHCGDADLPRWLAPTRERRLPLLEAREYHRQCKDWAKALLTRALDS ALGTAAGIALFQFSGLYNLETTVGGIRVNGFASEFPSRKRDRCAVIQCAAPGNYRNGFNSLEQTLAHEIGHQLFLPHAPF PAHREIGGAQAKRHDVDGKDCLMGYDFTTERRFCGLCLLRLRGWNTHALDRDGARNARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77556; Mature: 77425
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARISLTASVALAAPGGRNRNRLRPASHGIADFRLRSPGGPQSRCHRPVPFPALTGGDDG CCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCC FHFAPEVEPVELTWRLLNTSGLVRAGKLELFTRYRKAPLWSRELSREELLQGEHRWAWDG CCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHCCCHHHHCCHHHHHCCCCCEEECC RVPESETSPDGVVTVEHSPYKLKLTLQGSGLAQAPVAWTFFHVLVAGVDLELGEPRVLSR CCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCC PRDRELTQSLKRLPAPDEKAEIRLVGNVFKTKPSEMSDDTDHQLHRKHWGSGPELPLFAR CCCHHHHHHHHHCCCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHH AWLKDSRGNRVDAPKALGRVRFLWDWEDETEAIEHHAPTARAFLKHALDRHCSTSQPKGD HHHHCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC NAHRDVGGKRGAPSLAVFPRQAGYAPQAEPRDGAFPFRVTPCNKRGWAAYSQAWTTGAFA CCHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCC GRTGVVFQPSSIAGDAWRVTVQLAYDRRKDGGVVLDVDDDGPLPAAVRAATGVFESWREV CCCCEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH HISRLLCKDTGASGFSLSAVQGHFEQAFLRLEDRTGGVSGWCAREYNACIAEAVAASRHW HHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE ELRAAIDPAVDQFAAGGHALTFRTHAEFLAEVKRVKHCGDADLPRWLAPTRERRLPLLEA EEEEHHCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHCCCHHHH REYHRQCKDWAKALLTRALDSALGTAAGIALFQFSGLYNLETTVGGIRVNGFASEFPSRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCHHHHCCCCC RDRCAVIQCAAPGNYRNGFNSLEQTLAHEIGHQLFLPHAPFPAHREIGGAQAKRHDVDGK CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCHHHCCCCCHHHCCCCCC DCLMGYDFTTERRFCGLCLLRLRGWNTHALDRDGARNARP CEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARISLTASVALAAPGGRNRNRLRPASHGIADFRLRSPGGPQSRCHRPVPFPALTGGDDG CEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCC FHFAPEVEPVELTWRLLNTSGLVRAGKLELFTRYRKAPLWSRELSREELLQGEHRWAWDG CCCCCCCCCCEEEEEEECCCCCEECCHHHHHHHHHHCCCHHHHCCHHHHHCCCCCEEECC RVPESETSPDGVVTVEHSPYKLKLTLQGSGLAQAPVAWTFFHVLVAGVDLELGEPRVLSR CCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCC PRDRELTQSLKRLPAPDEKAEIRLVGNVFKTKPSEMSDDTDHQLHRKHWGSGPELPLFAR CCCHHHHHHHHHCCCCCCCCEEEEECHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHH AWLKDSRGNRVDAPKALGRVRFLWDWEDETEAIEHHAPTARAFLKHALDRHCSTSQPKGD HHHHCCCCCCCCCHHHHCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC NAHRDVGGKRGAPSLAVFPRQAGYAPQAEPRDGAFPFRVTPCNKRGWAAYSQAWTTGAFA CCHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCCC GRTGVVFQPSSIAGDAWRVTVQLAYDRRKDGGVVLDVDDDGPLPAAVRAATGVFESWREV CCCCEEECCCCCCCCEEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH HISRLLCKDTGASGFSLSAVQGHFEQAFLRLEDRTGGVSGWCAREYNACIAEAVAASRHW HHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHCCE ELRAAIDPAVDQFAAGGHALTFRTHAEFLAEVKRVKHCGDADLPRWLAPTRERRLPLLEA EEEEHHCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHCCCHHHH REYHRQCKDWAKALLTRALDSALGTAAGIALFQFSGLYNLETTVGGIRVNGFASEFPSRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCHHHHCCCCC RDRCAVIQCAAPGNYRNGFNSLEQTLAHEIGHQLFLPHAPFPAHREIGGAQAKRHDVDGK CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCHHHCCCCCHHHCCCCCC DCLMGYDFTTERRFCGLCLLRLRGWNTHALDRDGARNARP CEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA