| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762407
Identifier: 108762407
GI number: 108762407
Start: 544427
End: 545782
Strand: Reverse
Name: 108762407
Synonym: MXAN_0485
Alternate gene names: NA
Gene position: 545782-544427 (Counterclockwise)
Preceding gene: 108762978
Following gene: 108761401
Centisome position: 5.97
GC content: 67.04
Gene sequence:
>1356_bases ATGAGCGTGCGCGGGGCCATCTGGCTGGTGTTGGCGCTTGCCATGACAAGCTGTTCAACCACTCGACTCGTGCGCCTGGA CACGGGGGACGGGCGCCCCATGGTCCACACGCCACTCACGGAGGACGACGCCGCGCCCGTCGAGTTGGACGATGACGATT TCGAGGAGGCAGTGGTTGCGCTCGCCCGGGATGTGCGGCCCTTCTCCAATCCCCTGCGCGAGGCCCGCCAACGCTTCGGC GTTCCCGAACGCAGCGGCGTGTACCTGTATCAGCCTCGCGGCCCCCGGCTCATCCCCCAGGGCGAAGCGATGGACTCGGA CAGCCCGCGCCTGCTGGATTCCTACGCGGATGACGACCTGACACGCGCCTATGGCCGCTGGTGCGAGCGCAAGTCCCAGC CCGGCGACTGCCTGCACCTGCTGGCCGACGGCCCGCTGCTGGCCAGCGACGGCAAATACTCGCTGGCCATGGCCATCGCC ATGGACTCGGTTTGGGACGAGACGGCCGAGGCGCTGCGTGACATGGCCGACCCTCAGGCCCTGCTCGCGACGGTCAGCGC CTCGGTCAGCATGTATCTGCTCCTCTGGTCGCTTCCCGAGCCAGTGAGCAAGGGCCTGGCCGCGCTGCTGACGGCCACAG CCATCGCCTACCTGGGCGTCGACACCGTGTGGCGCATCCTGGACGGCTGGGTGACGCTGGTGCGCGAGGTGGAACGGGCC ACCACCTTCGTGCAGCTCAGCGAGGCGGGCGAGACGTACGGCGAAGTCCTCGGGGAGAACGCCGCGCGCGTCTTCGTCAT GCTGGCCACGGCGGCCATCGGAAACACGGCGGGACTGGCAGCCAATACGTCGCGGCTGCCGGGCTCCGCGCAGGCGGCCA TCGCAGTGGAGACGCAGGCGGGCTACCAGTACGTAGCCATGGGAGGCGTGCAGTCGGTGGCGATGGCGGCCGAGGGCTTC ACCATCGCGCTGGCCCCCAATGCGGTCGCCATGGCGAATCGGGGGATGGGCAGCGGAGGCTCAAGGGGAAGGAGCCAAGA GCACCACCTTGCCACGGACAAGAACAGTGTCTCCACCGCTCGCGGCGGACCCTGGACGCCTGAATTCAGGAGGCTCTTCA GGAAGGCTGGAATGGAGTTGAAAGACCCTGAGAACGTCGTTGATGTTCCTGGCCACAAGGGGCCTCACCCGCAGGAGTAC CATGAGGCGGTTTACGAAAGACTCCGCGATGCGACAAGAACGTGCCGCACCGTGGTTGCGTGCCGCAAATCGCTATCGGC CGCACTCAAGGAGCTGGCCGAGGAAGTCACGACGAAGGGAACACGACTCCACAGGCTCGTAACCAAGGGCAAGTGA
Upstream 100 bases:
>100_bases CGACCCGAGCCCCCACCCCAGCCTCACCATACCTTGTCGAACTCCGCTGCTATTCCTGGCATGGTCTCGTGGGGAGCGAA CGCGGAGCCGGAGGAGTTGA
Downstream 100 bases:
>100_bases GGTAGAGAGGAAGTCCACCATGCCCAAGCGCTACTTCAGGCTCAAAGAGGACATGCAAGCCGAGAACTGGGACCTGGGAG ACCCCCTGGACGAGAAAGGC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSVRGAIWLVLALAMTSCSTTRLVRLDTGDGRPMVHTPLTEDDAAPVELDDDDFEEAVVALARDVRPFSNPLREARQRFG VPERSGVYLYQPRGPRLIPQGEAMDSDSPRLLDSYADDDLTRAYGRWCERKSQPGDCLHLLADGPLLASDGKYSLAMAIA MDSVWDETAEALRDMADPQALLATVSASVSMYLLLWSLPEPVSKGLAALLTATAIAYLGVDTVWRILDGWVTLVREVERA TTFVQLSEAGETYGEVLGENAARVFVMLATAAIGNTAGLAANTSRLPGSAQAAIAVETQAGYQYVAMGGVQSVAMAAEGF TIALAPNAVAMANRGMGSGGSRGRSQEHHLATDKNSVSTARGGPWTPEFRRLFRKAGMELKDPENVVDVPGHKGPHPQEY HEAVYERLRDATRTCRTVVACRKSLSAALKELAEEVTTKGTRLHRLVTKGK
Sequences:
>Translated_451_residues MSVRGAIWLVLALAMTSCSTTRLVRLDTGDGRPMVHTPLTEDDAAPVELDDDDFEEAVVALARDVRPFSNPLREARQRFG VPERSGVYLYQPRGPRLIPQGEAMDSDSPRLLDSYADDDLTRAYGRWCERKSQPGDCLHLLADGPLLASDGKYSLAMAIA MDSVWDETAEALRDMADPQALLATVSASVSMYLLLWSLPEPVSKGLAALLTATAIAYLGVDTVWRILDGWVTLVREVERA TTFVQLSEAGETYGEVLGENAARVFVMLATAAIGNTAGLAANTSRLPGSAQAAIAVETQAGYQYVAMGGVQSVAMAAEGF TIALAPNAVAMANRGMGSGGSRGRSQEHHLATDKNSVSTARGGPWTPEFRRLFRKAGMELKDPENVVDVPGHKGPHPQEY HEAVYERLRDATRTCRTVVACRKSLSAALKELAEEVTTKGTRLHRLVTKGK >Mature_450_residues SVRGAIWLVLALAMTSCSTTRLVRLDTGDGRPMVHTPLTEDDAAPVELDDDDFEEAVVALARDVRPFSNPLREARQRFGV PERSGVYLYQPRGPRLIPQGEAMDSDSPRLLDSYADDDLTRAYGRWCERKSQPGDCLHLLADGPLLASDGKYSLAMAIAM DSVWDETAEALRDMADPQALLATVSASVSMYLLLWSLPEPVSKGLAALLTATAIAYLGVDTVWRILDGWVTLVREVERAT TFVQLSEAGETYGEVLGENAARVFVMLATAAIGNTAGLAANTSRLPGSAQAAIAVETQAGYQYVAMGGVQSVAMAAEGFT IALAPNAVAMANRGMGSGGSRGRSQEHHLATDKNSVSTARGGPWTPEFRRLFRKAGMELKDPENVVDVPGHKGPHPQEYH EAVYERLRDATRTCRTVVACRKSLSAALKELAEEVTTKGTRLHRLVTKGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48686; Mature: 48555
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRGAIWLVLALAMTSCSTTRLVRLDTGDGRPMVHTPLTEDDAAPVELDDDDFEEAVVA CCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH LARDVRPFSNPLREARQRFGVPERSGVYLYQPRGPRLIPQGEAMDSDSPRLLDSYADDDL HHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHCCHHH TRAYGRWCERKSQPGDCLHLLADGPLLASDGKYSLAMAIAMDSVWDETAEALRDMADPQA HHHHHHHHHCCCCCCCEEHEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH LLATVSASVSMYLLLWSLPEPVSKGLAALLTATAIAYLGVDTVWRILDGWVTLVREVERA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTFVQLSEAGETYGEVLGENAARVFVMLATAAIGNTAGLAANTSRLPGSAQAAIAVETQA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC GYQYVAMGGVQSVAMAAEGFTIALAPNAVAMANRGMGSGGSRGRSQEHHLATDKNSVSTA CEEEEECCCHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGGPWTPEFRRLFRKAGMELKDPENVVDVPGHKGPHPQEYHEAVYERLRDATRTCRTVVA CCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CRKSLSAALKELAEEVTTKGTRLHRLVTKGK HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure SVRGAIWLVLALAMTSCSTTRLVRLDTGDGRPMVHTPLTEDDAAPVELDDDDFEEAVVA CCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHH LARDVRPFSNPLREARQRFGVPERSGVYLYQPRGPRLIPQGEAMDSDSPRLLDSYADDDL HHHHCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCCHHHHHHCCHHH TRAYGRWCERKSQPGDCLHLLADGPLLASDGKYSLAMAIAMDSVWDETAEALRDMADPQA HHHHHHHHHCCCCCCCEEHEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH LLATVSASVSMYLLLWSLPEPVSKGLAALLTATAIAYLGVDTVWRILDGWVTLVREVERA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TTFVQLSEAGETYGEVLGENAARVFVMLATAAIGNTAGLAANTSRLPGSAQAAIAVETQA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECC GYQYVAMGGVQSVAMAAEGFTIALAPNAVAMANRGMGSGGSRGRSQEHHLATDKNSVSTA CEEEEECCCHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGGPWTPEFRRLFRKAGMELKDPENVVDVPGHKGPHPQEYHEAVYERLRDATRTCRTVVA CCCCCCHHHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CRKSLSAALKELAEEVTTKGTRLHRLVTKGK HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA