| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762382
Identifier: 108762382
GI number: 108762382
Start: 3446257
End: 3447570
Strand: Direct
Name: 108762382
Synonym: MXAN_2936
Alternate gene names: NA
Gene position: 3446257-3447570 (Clockwise)
Preceding gene: 108759812
Following gene: 108764095
Centisome position: 37.71
GC content: 65.68
Gene sequence:
>1314_bases TTGTTCGCGAAGGGGAGGCTGCACATGAAGCGGGAAGTGAAGGCCGGCATTGCCGGGCTGTTGTTCGGGTCCATGCTGGT CGGCTGCGGGGTGGCGCCGGAACAAGAAGAACTGGGCGGCTTGGAGGACGCGACGGCGGAGTCGGAGGCTGAGGCGCCAA TGAGCGCCGAGACCGGGCTCGAGAAAAGCGGGGGTTACGCCCAGCCCGCCCCGCTGGCGCGCTTCTGGCCAGCGGTTGCG TACGGCGGGGGCAAATTCCTCGCGGTCTGGACCGACGTGCGGACCGGCGGCATCTACGGCACTCGGGTGAAGCCAGACGG CACCGTGCTCGACCCTGCGGACATTCGCATCAACATTGGAGACGTCGAAGGATTCCGGCCCGGCATCGGTTTCAACGGGA CGCACTTCTTCGTCGTCTGGGAGAGCGTGGATGGTATCGACGCCGTGCGCGTGAAGCCGGACGGCACCGTGGTGGGCCCG GTATTCAACGTCAAACAATCGGGTGAAACCGTCGGCCCGGCGCGAGTCGCCTGCTCCCCGAAAATCTGCCTGGTGACGTA CACCGTCTCCGGTGACTTCTCGAACATCTTCTTCACGCGGGTGACGAAGGATGGCGTCGTCCTTGATACGGGCGACGAGT CCCTCAGCGCCTCCGACACCTTCGCGAATGACGCGTCGCCGACCTGGAACAACAAAACGAAGGAGTTCCTGGTCGTCTGG TCCGACGAGCACGGCCAAGGCCCGGAGAATGCGGACATCTACGGCAACAGGGTGAAGGAGGACGGCACCATCCTCGACGG CGACGGCTTCCCCATCTCCCAGGCCGAGGGCGCCCAGACGACGCCTGACGTGGAGTGGACGCACAAGAATTACCAGGTGG TCTGGACCGATGACCGGAATGGGAACGCGGACATCTTCGGCGCGCGCGTGAGCAAGACAGGCATGGTGAAGGACCCCGAA GGCATCCCCATCTCCACCGCAGAGGGCGCGCAGGCCGAGCCGCGCATCGCCCACCACAACGACAAGTCCCTGGTCGTCTG GGACGACAGGCGTGACGGTCCGCATGCCGTGTGGGGTGCGCGGTGGGGCGAGAACGGGGACGTGTGGGACCCCTCGGGTT TCCCTATCTCCACCGGGGACCAACCACAGGAGTACCTGCCGGATGTCGCCTACGGGGGCGGCAAGTTCTTCGTTGTCTAC TCGGGCCAGGAGACGTTCGATCCCCTCGAACCGCACTTCATCCTGGGCACGCGGGTGACGCACCAGGCGCACGTGAAGGA CGTGCCCGCCCTGCCGCTCACGCGCCAGCACTGA
Upstream 100 bases:
>100_bases ATGGCAGGGGCGGCGGCTCGATGCGCCTGTCCACCGTCTTATTCGGACTGCGCCCCACGGGTGGCTGGTGACGTGCGTGT AGGTCCCCAGCTTTGCGCCG
Downstream 100 bases:
>100_bases GTCGTTGAAGGAGAGGGCCTCGCCGCGCGTGCGAGACGGTGTTCCCCAGAGGCCCGGGCCGGCGCATGCACGCCGGCCCG AGCCCTGCGCTCGGGCTCAG
Product: putative lipoprotein
Products: NA
Alternate protein names: Cell Wall/Surface Repeat-Containing Protein
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MFAKGRLHMKREVKAGIAGLLFGSMLVGCGVAPEQEELGGLEDATAESEAEAPMSAETGLEKSGGYAQPAPLARFWPAVA YGGGKFLAVWTDVRTGGIYGTRVKPDGTVLDPADIRINIGDVEGFRPGIGFNGTHFFVVWESVDGIDAVRVKPDGTVVGP VFNVKQSGETVGPARVACSPKICLVTYTVSGDFSNIFFTRVTKDGVVLDTGDESLSASDTFANDASPTWNNKTKEFLVVW SDEHGQGPENADIYGNRVKEDGTILDGDGFPISQAEGAQTTPDVEWTHKNYQVVWTDDRNGNADIFGARVSKTGMVKDPE GIPISTAEGAQAEPRIAHHNDKSLVVWDDRRDGPHAVWGARWGENGDVWDPSGFPISTGDQPQEYLPDVAYGGGKFFVVY SGQETFDPLEPHFILGTRVTHQAHVKDVPALPLTRQH
Sequences:
>Translated_437_residues MFAKGRLHMKREVKAGIAGLLFGSMLVGCGVAPEQEELGGLEDATAESEAEAPMSAETGLEKSGGYAQPAPLARFWPAVA YGGGKFLAVWTDVRTGGIYGTRVKPDGTVLDPADIRINIGDVEGFRPGIGFNGTHFFVVWESVDGIDAVRVKPDGTVVGP VFNVKQSGETVGPARVACSPKICLVTYTVSGDFSNIFFTRVTKDGVVLDTGDESLSASDTFANDASPTWNNKTKEFLVVW SDEHGQGPENADIYGNRVKEDGTILDGDGFPISQAEGAQTTPDVEWTHKNYQVVWTDDRNGNADIFGARVSKTGMVKDPE GIPISTAEGAQAEPRIAHHNDKSLVVWDDRRDGPHAVWGARWGENGDVWDPSGFPISTGDQPQEYLPDVAYGGGKFFVVY SGQETFDPLEPHFILGTRVTHQAHVKDVPALPLTRQH >Mature_437_residues MFAKGRLHMKREVKAGIAGLLFGSMLVGCGVAPEQEELGGLEDATAESEAEAPMSAETGLEKSGGYAQPAPLARFWPAVA YGGGKFLAVWTDVRTGGIYGTRVKPDGTVLDPADIRINIGDVEGFRPGIGFNGTHFFVVWESVDGIDAVRVKPDGTVVGP VFNVKQSGETVGPARVACSPKICLVTYTVSGDFSNIFFTRVTKDGVVLDTGDESLSASDTFANDASPTWNNKTKEFLVVW SDEHGQGPENADIYGNRVKEDGTILDGDGFPISQAEGAQTTPDVEWTHKNYQVVWTDDRNGNADIFGARVSKTGMVKDPE GIPISTAEGAQAEPRIAHHNDKSLVVWDDRRDGPHAVWGARWGENGDVWDPSGFPISTGDQPQEYLPDVAYGGGKFFVVY SGQETFDPLEPHFILGTRVTHQAHVKDVPALPLTRQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47076; Mature: 47076
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAKGRLHMKREVKAGIAGLLFGSMLVGCGVAPEQEELGGLEDATAESEAEAPMSAETGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCC EKSGGYAQPAPLARFWPAVAYGGGKFLAVWTDVRTGGIYGTRVKPDGTVLDPADIRINIG CCCCCCCCCCCHHHHHHHEEECCCEEEEEEEEECCCCEEEEEECCCCCEECCCCEEEEEC DVEGFRPGIGFNGTHFFVVWESVDGIDAVRVKPDGTVVGPVFNVKQSGETVGPARVACSP CCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCEEECCEEECCCCCCCCCCEEEECCC KICLVTYTVSGDFSNIFFTRVTKDGVVLDTGDESLSASDTFANDASPTWNNKTKEFLVVW CEEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE SDEHGQGPENADIYGNRVKEDGTILDGDGFPISQAEGAQTTPDVEWTHKNYQVVWTDDRN CCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCC GNADIFGARVSKTGMVKDPEGIPISTAEGAQAEPRIAHHNDKSLVVWDDRRDGPHAVWGA CCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEC RWGENGDVWDPSGFPISTGDQPQEYLPDVAYGGGKFFVVYSGQETFDPLEPHFILGTRVT CCCCCCCEECCCCCCCCCCCCHHHHCCCCEECCCEEEEEECCCCCCCCCCCCEEEEEEEE HQAHVKDVPALPLTRQH CHHHHCCCCCCCCCCCC >Mature Secondary Structure MFAKGRLHMKREVKAGIAGLLFGSMLVGCGVAPEQEELGGLEDATAESEAEAPMSAETGL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHCCC EKSGGYAQPAPLARFWPAVAYGGGKFLAVWTDVRTGGIYGTRVKPDGTVLDPADIRINIG CCCCCCCCCCCHHHHHHHEEECCCEEEEEEEEECCCCEEEEEECCCCCEECCCCEEEEEC DVEGFRPGIGFNGTHFFVVWESVDGIDAVRVKPDGTVVGPVFNVKQSGETVGPARVACSP CCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCEEECCEEECCCCCCCCCCEEEECCC KICLVTYTVSGDFSNIFFTRVTKDGVVLDTGDESLSASDTFANDASPTWNNKTKEFLVVW CEEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE SDEHGQGPENADIYGNRVKEDGTILDGDGFPISQAEGAQTTPDVEWTHKNYQVVWTDDRN CCCCCCCCCCCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCC GNADIFGARVSKTGMVKDPEGIPISTAEGAQAEPRIAHHNDKSLVVWDDRRDGPHAVWGA CCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEC RWGENGDVWDPSGFPISTGDQPQEYLPDVAYGGGKFFVVYSGQETFDPLEPHFILGTRVT CCCCCCCEECCCCCCCCCCCCHHHHCCCCEECCCEEEEEECCCCCCCCCCCCEEEEEEEE HQAHVKDVPALPLTRQH CHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA