Click here to switch to the map view.

The map label for this gene is yfiA

Identifier: 108762376

GI number: 108762376

Start: 6482188

End: 6482547

Strand: Reverse

Name: yfiA

Synonym: MXAN_5188

Alternate gene names: NA

Gene position: 6482547-6482188 (Counterclockwise)

Preceding gene: 108763758

Following gene: 108759051

Centisome position: 70.93

GC content: 63.06

Gene sequence:

>360_bases
ATGAAGGTGTTGCTGCGTGGAGTGCACCTGAACCTGTCGGATGCTCTCAAGTCGTATGTCGACGAACACCTGGTGCGCCA
TATCGAACGGTTCGCGGATGACGAGGCAGCGGAAATCGACATCTCGCTGGTGGACACCAACGGGCCCAAGGGCGGCATGG
ACAAGGAATGCCGGGTCACGGTGCGACTGCCCGGGCTCTCCTCGGTGCACGTGACGGAGACGGCGGACTCGTTGTTCCCC
GCCATCGACGCATCGCGTGACCGGTTGGAGACGAGCCTCAAGCGCATGCTGGGGAAGCGGCGCGACGTTCATACCAACGG
CCTGCCCGAGGACGTGGCGGTCGACGTTCCCACCTACTAA

Upstream 100 bases:

>100_bases
GCCGGAGAGCAGGGGAGCGTCAGGCGGGCTCCATTAATGGGCAGGGGGTGGCTCACCACCGGGCGTCAGGCTGCCCATCT
TTGGGCTCGGAGGAAATGCC

Downstream 100 bases:

>100_bases
TCGCGGTTGGCGGTAGCAAGAGCCCGGCCACCCAGGTCGTACACCTGGCGGCCGGGCTCGTCTTGTCCAGTGCCCGAATC
TTGCTGGGGCGGAACGGTGA

Product: ribosomal subunit interface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKVLLRGVHLNLSDALKSYVDEHLVRHIERFADDEAAEIDISLVDTNGPKGGMDKECRVTVRLPGLSSVHVTETADSLFP
AIDASRDRLETSLKRMLGKRRDVHTNGLPEDVAVDVPTY

Sequences:

>Translated_119_residues
MKVLLRGVHLNLSDALKSYVDEHLVRHIERFADDEAAEIDISLVDTNGPKGGMDKECRVTVRLPGLSSVHVTETADSLFP
AIDASRDRLETSLKRMLGKRRDVHTNGLPEDVAVDVPTY
>Mature_119_residues
MKVLLRGVHLNLSDALKSYVDEHLVRHIERFADDEAAEIDISLVDTNGPKGGMDKECRVTVRLPGLSSVHVTETADSLFP
AIDASRDRLETSLKRMLGKRRDVHTNGLPEDVAVDVPTY

Specific function: Unknown

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13207; Mature: 13207

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLRGVHLNLSDALKSYVDEHLVRHIERFADDEAAEIDISLVDTNGPKGGMDKECRVT
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEE
VRLPGLSSVHVTETADSLFPAIDASRDRLETSLKRMLGKRRDVHTNGLPEDVAVDVPTY
EECCCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MKVLLRGVHLNLSDALKSYVDEHLVRHIERFADDEAAEIDISLVDTNGPKGGMDKECRVT
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEE
VRLPGLSSVHVTETADSLFPAIDASRDRLETSLKRMLGKRRDVHTNGLPEDVAVDVPTY
EECCCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA