| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108762373
Identifier: 108762373
GI number: 108762373
Start: 4657014
End: 4658231
Strand: Direct
Name: 108762373
Synonym: MXAN_3878
Alternate gene names: NA
Gene position: 4657014-4658231 (Clockwise)
Preceding gene: 108762449
Following gene: 108758219
Centisome position: 50.95
GC content: 69.21
Gene sequence:
>1218_bases ATGCCCGCGCCGGGGATCCGGGTTTTGCCGCGTCCGACCGGCCCCGGCAGGACGCCACAGAGCAACAGGGCCTCCCATTT ATTCCCGAGGAGCGGTACACCTGGGCCCATCATGGCCGAGACCTCTTCGCTCAACATCCCCACTGTCGACCTCGCCGACC TCGCGTCGGATGACTCCGCTCGCGTCGAGCGCGCCGCCGCGGCGATCCGCGAGGCCTTTGGCGTCTTTGGCCTCGTGTAC CTGAAGAACCACGGCGTCGACACCCAGGCGCTGAACCGGTTCTATGACGCGTTCGCGGCGTTCATCGCCCGGCCCGCCGA GGAGAAGAAGCCCTACGGCCGCGCGGACATCTGGTACCAGCGCGGCTGGACGCCTCCGAACACCGAGGTCGCGGTCGCCA GCAATGGCCAGCCGGACTTCAAGGAGTGCTATTTCGTCGCGCCCTACCCCAACGACGCGCAGTCCGCGCTCGAGTTCCCG GAGCTGTACCCGGAGAACGTGTGGCCCCAGAACGCGCCGCCCTACTTCGAGGACGGCATCATGACGCTGGGCCGCTCCCT CCATGAGGCCGGCCTGAAGCTGCTCCGTGGCTCCGCGGTGGCCCTGGGCCTGCCGGAGACGCTGTTCACCGACCTGTGCG ACCGGGCTGCCCACGTCACCCGCGCGCTCCAGTACCTGCCGCTCACCAACACGCAGGTGAACACGGACATCGTCTGGGGC GAGGAGCACACCGACTTCAATCTGCTCACCCTGCTCCCGGGCGGCCGCTTCCTGGACCCGGACGGCAGCCCCGCGCCCGG CCCCGACAACAAGAGCGGCCTCTACCTCCGCACCCGCGCGACGCCCGAGGCCCCGAACGGACTCAAGGTGCGGGGAACCG CGCCCGCGGGTTGCATCGTGGCGCAGGTGGGCCAGCAGTTGGAGATCCTCACGGGTGGCACCTTCCTCGCCACGCCGCAT GTCATCACCGCCCCGGGCGTGCCGGGTTGGCAGCGCCAGTCCGCCGCGCACTTCATGCACGTGCACACGAACACCGTGCT CTTCCCGCTGGAGAAGTTCCGCAGCGCGGATGCCGTCCGGAACTACGCGCCGCCCGTGCTCGCTGGGACGTATGACATCA AGACGCTGGTGGACATCGGCCTTGCGCCCGCGAGCGCGCTCGACAAGCTGGGTTACCGGCACTACGACCGGCTGAACCGC CAGCGCGCTGGCACGTAA
Upstream 100 bases:
>100_bases AGACGAGCTTCTTCACGGGGGAGACCTCTCGACAACGGGCGGCGGACGATAACCCCAGGCCCCAGGCCGCGCAGGGCGAG GCGCAGAATTTGCGCCAGGG
Downstream 100 bases:
>100_bases ACCTGGCGGTACCGCTTGAGGCCCCGGAGACAACCGGGGCCTCGCGTGAAACACAGCCATCAATCACAGACAGATAGACA CAGACGTATATTGAATGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Iron/Ascorbate Oxidoreductase; 2OG-Fe(II) Oxygenase Superfamily Protein; 1-Aminocyclopropane-1-Carboxylate Oxidase; Flavonol Synthase/Dioxygenase; 2og-Fe(Ii) Oxygenase; Isopenicillin N Synthase And Related Dioxygenases; Oxidoreductase 2og-Fe(Ii) Oxygenase Family; Iron/Ascorbate-Dependent Oxidoreductase Family Protein; Oxidoreductase Iron/Ascorbate Family Protein; Oxidoreductase Iron/Ascorbate Family; Isopenicillin-N Synthase; Oxygenase/Oxidoreductase
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MPAPGIRVLPRPTGPGRTPQSNRASHLFPRSGTPGPIMAETSSLNIPTVDLADLASDDSARVERAAAAIREAFGVFGLVY LKNHGVDTQALNRFYDAFAAFIARPAEEKKPYGRADIWYQRGWTPPNTEVAVASNGQPDFKECYFVAPYPNDAQSALEFP ELYPENVWPQNAPPYFEDGIMTLGRSLHEAGLKLLRGSAVALGLPETLFTDLCDRAAHVTRALQYLPLTNTQVNTDIVWG EEHTDFNLLTLLPGGRFLDPDGSPAPGPDNKSGLYLRTRATPEAPNGLKVRGTAPAGCIVAQVGQQLEILTGGTFLATPH VITAPGVPGWQRQSAAHFMHVHTNTVLFPLEKFRSADAVRNYAPPVLAGTYDIKTLVDIGLAPASALDKLGYRHYDRLNR QRAGT
Sequences:
>Translated_405_residues MPAPGIRVLPRPTGPGRTPQSNRASHLFPRSGTPGPIMAETSSLNIPTVDLADLASDDSARVERAAAAIREAFGVFGLVY LKNHGVDTQALNRFYDAFAAFIARPAEEKKPYGRADIWYQRGWTPPNTEVAVASNGQPDFKECYFVAPYPNDAQSALEFP ELYPENVWPQNAPPYFEDGIMTLGRSLHEAGLKLLRGSAVALGLPETLFTDLCDRAAHVTRALQYLPLTNTQVNTDIVWG EEHTDFNLLTLLPGGRFLDPDGSPAPGPDNKSGLYLRTRATPEAPNGLKVRGTAPAGCIVAQVGQQLEILTGGTFLATPH VITAPGVPGWQRQSAAHFMHVHTNTVLFPLEKFRSADAVRNYAPPVLAGTYDIKTLVDIGLAPASALDKLGYRHYDRLNR QRAGT >Mature_404_residues PAPGIRVLPRPTGPGRTPQSNRASHLFPRSGTPGPIMAETSSLNIPTVDLADLASDDSARVERAAAAIREAFGVFGLVYL KNHGVDTQALNRFYDAFAAFIARPAEEKKPYGRADIWYQRGWTPPNTEVAVASNGQPDFKECYFVAPYPNDAQSALEFPE LYPENVWPQNAPPYFEDGIMTLGRSLHEAGLKLLRGSAVALGLPETLFTDLCDRAAHVTRALQYLPLTNTQVNTDIVWGE EHTDFNLLTLLPGGRFLDPDGSPAPGPDNKSGLYLRTRATPEAPNGLKVRGTAPAGCIVAQVGQQLEILTGGTFLATPHV ITAPGVPGWQRQSAAHFMHVHTNTVLFPLEKFRSADAVRNYAPPVLAGTYDIKTLVDIGLAPASALDKLGYRHYDRLNRQ RAGT
Specific function: Unknown
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43984; Mature: 43853
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPGIRVLPRPTGPGRTPQSNRASHLFPRSGTPGPIMAETSSLNIPTVDLADLASDDSA CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCHH RVERAAAAIREAFGVFGLVYLKNHGVDTQALNRFYDAFAAFIARPAEEKKPYGRADIWYQ HHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEE RGWTPPNTEVAVASNGQPDFKECYFVAPYPNDAQSALEFPELYPENVWPQNAPPYFEDGI CCCCCCCCEEEEECCCCCCHHHEEEECCCCCCHHHHHHCHHHCCCCCCCCCCCCHHHHHH MTLGRSLHEAGLKLLRGSAVALGLPETLFTDLCDRAAHVTRALQYLPLTNTQVNTDIVWG HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC EEHTDFNLLTLLPGGRFLDPDGSPAPGPDNKSGLYLRTRATPEAPNGLKVRGTAPAGCIV CCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHH AQVGQQLEILTGGTFLATPHVITAPGVPGWQRQSAAHFMHVHTNTVLFPLEKFRSADAVR HHHCCEEEEEECCEEEECCCEEECCCCCCCCHHCCCEEEEEECCEEEEEHHHHCCHHHHH NYAPPVLAGTYDIKTLVDIGLAPASALDKLGYRHYDRLNRQRAGT HCCCCCEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PAPGIRVLPRPTGPGRTPQSNRASHLFPRSGTPGPIMAETSSLNIPTVDLADLASDDSA CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCHH RVERAAAAIREAFGVFGLVYLKNHGVDTQALNRFYDAFAAFIARPAEEKKPYGRADIWYQ HHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEE RGWTPPNTEVAVASNGQPDFKECYFVAPYPNDAQSALEFPELYPENVWPQNAPPYFEDGI CCCCCCCCEEEEECCCCCCHHHEEEECCCCCCHHHHHHCHHHCCCCCCCCCCCCHHHHHH MTLGRSLHEAGLKLLRGSAVALGLPETLFTDLCDRAAHVTRALQYLPLTNTQVNTDIVWG HHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC EEHTDFNLLTLLPGGRFLDPDGSPAPGPDNKSGLYLRTRATPEAPNGLKVRGTAPAGCIV CCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCHHHH AQVGQQLEILTGGTFLATPHVITAPGVPGWQRQSAAHFMHVHTNTVLFPLEKFRSADAVR HHHCCEEEEEECCEEEECCCEEECCCCCCCCHHCCCEEEEEECCEEEEEHHHHCCHHHHH NYAPPVLAGTYDIKTLVDIGLAPASALDKLGYRHYDRLNRQRAGT HCCCCCEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA