| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762360
Identifier: 108762360
GI number: 108762360
Start: 6992116
End: 6992994
Strand: Direct
Name: 108762360
Synonym: MXAN_5627
Alternate gene names: NA
Gene position: 6992116-6992994 (Clockwise)
Preceding gene: 108757338
Following gene: 108761814
Centisome position: 76.5
GC content: 66.21
Gene sequence:
>879_bases ATGCGAATCCCACTCCATGCCTTCATCGCAGCAATGCTCGTGGCCTCTGCTTGTGGAGGCGAGGCACCGTCCTCCGCCGA TTCCAGTCCGGACGAAGCCCTCGCTTCACGGGAGCAGGCGGCGTTCTCCGGTGTGAATGGCACCTACTGTCTGGTCAGCC CCTACAACTGCAAGCTGCAAGCGTCTGGCGGAAACCGCGTCCCCACCAACTCGCCCGAGGACGACAACTGGGGTCTGGTG ACAGGCGTTCCCATCCGGGACGGTCATGGCACGGTGGTAGGCACCAACACGCGGACGAGCGCGGCCTTCAACTATGGCCA GACGCGCACCTTCGCGGGCGAGAAGCATGCCTTCGCGGTGTCGACGTCCAACTCCAGCGCCGGGTGGCTCCCCATCTCCA GCATCCTGGGGAGGACTTCCTTCGAGCAGAAGGTCGGCCACGTCTCCGCGCTCGGCGCGGGCCTGGGCAACCTGGGCTGC TACGCCGTGCGCGACTGGCACGACACCACGCTCGAATTCAAGAAGGTCGTCTACGACAGCACGGCGACGCACGAGCGGGC CGGGGACTACCTGCCGTTGGTGCGCGCCAATGGCCTGCGCTCGGCGAACCTGGTCTTCAACGTGCCGGGCTTCGCGCTGG GCGGGCCCGCAGTGGACCACTTCCCCGCAGGGACGAAGTTCCAGCGCCTGGACGTCCCCACCGAGCACGGCGTGCCGTCC ATCGACATTCCCCTGTGGGTCCAGGACAGCGCCGGACGCTACCGTCAGCAGTCCGGCACCATGAAATTCCTCTACGGTTA CGTCATCGCCGCCACGGGAACGAAGCGCAACGGGTGGATGGCCTATGACGCCCTCCAGGTCAGCTCTGGCTGTCCCTGA
Upstream 100 bases:
>100_bases GAAAGGAATATGTCTATCATTGACCATTTCCCCTCCCCGCCGACAAGCCCGCACAACCGTTCACTTGCTTTCTCAAATCC TGTCGAATTCCCATCTCAAG
Downstream 100 bases:
>100_bases GCCCCGTCAGGAGCGCGCCCACGTCGCGCGCGGAGGACATGACGCCGTGCATGCGCGCGCCCGCCCGGTCGCGGTGTGCA CTGGCGGTCGTTGTAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MRIPLHAFIAAMLVASACGGEAPSSADSSPDEALASREQAAFSGVNGTYCLVSPYNCKLQASGGNRVPTNSPEDDNWGLV TGVPIRDGHGTVVGTNTRTSAAFNYGQTRTFAGEKHAFAVSTSNSSAGWLPISSILGRTSFEQKVGHVSALGAGLGNLGC YAVRDWHDTTLEFKKVVYDSTATHERAGDYLPLVRANGLRSANLVFNVPGFALGGPAVDHFPAGTKFQRLDVPTEHGVPS IDIPLWVQDSAGRYRQQSGTMKFLYGYVIAATGTKRNGWMAYDALQVSSGCP
Sequences:
>Translated_292_residues MRIPLHAFIAAMLVASACGGEAPSSADSSPDEALASREQAAFSGVNGTYCLVSPYNCKLQASGGNRVPTNSPEDDNWGLV TGVPIRDGHGTVVGTNTRTSAAFNYGQTRTFAGEKHAFAVSTSNSSAGWLPISSILGRTSFEQKVGHVSALGAGLGNLGC YAVRDWHDTTLEFKKVVYDSTATHERAGDYLPLVRANGLRSANLVFNVPGFALGGPAVDHFPAGTKFQRLDVPTEHGVPS IDIPLWVQDSAGRYRQQSGTMKFLYGYVIAATGTKRNGWMAYDALQVSSGCP >Mature_292_residues MRIPLHAFIAAMLVASACGGEAPSSADSSPDEALASREQAAFSGVNGTYCLVSPYNCKLQASGGNRVPTNSPEDDNWGLV TGVPIRDGHGTVVGTNTRTSAAFNYGQTRTFAGEKHAFAVSTSNSSAGWLPISSILGRTSFEQKVGHVSALGAGLGNLGC YAVRDWHDTTLEFKKVVYDSTATHERAGDYLPLVRANGLRSANLVFNVPGFALGGPAVDHFPAGTKFQRLDVPTEHGVPS IDIPLWVQDSAGRYRQQSGTMKFLYGYVIAATGTKRNGWMAYDALQVSSGCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30893; Mature: 30893
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPLHAFIAAMLVASACGGEAPSSADSSPDEALASREQAAFSGVNGTYCLVSPYNCKLQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEE ASGGNRVPTNSPEDDNWGLVTGVPIRDGHGTVVGTNTRTSAAFNYGQTRTFAGEKHAFAV CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCEEECCCCEEEECCCCEEEEE STSNSSAGWLPISSILGRTSFEQKVGHVSALGAGLGNLGCYAVRDWHDTTLEFKKVVYDS ECCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCC TATHERAGDYLPLVRANGLRSANLVFNVPGFALGGPAVDHFPAGTKFQRLDVPTEHGVPS CCCHHHCCCEECEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCC IDIPLWVQDSAGRYRQQSGTMKFLYGYVIAATGTKRNGWMAYDALQVSSGCP CCEEEEEECCCCCHHHHCCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MRIPLHAFIAAMLVASACGGEAPSSADSSPDEALASREQAAFSGVNGTYCLVSPYNCKLQ CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEE ASGGNRVPTNSPEDDNWGLVTGVPIRDGHGTVVGTNTRTSAAFNYGQTRTFAGEKHAFAV CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCCCCCEEECCCCEEEECCCCEEEEE STSNSSAGWLPISSILGRTSFEQKVGHVSALGAGLGNLGCYAVRDWHDTTLEFKKVVYDS ECCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCC TATHERAGDYLPLVRANGLRSANLVFNVPGFALGGPAVDHFPAGTKFQRLDVPTEHGVPS CCCHHHCCCEECEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHCCCCC IDIPLWVQDSAGRYRQQSGTMKFLYGYVIAATGTKRNGWMAYDALQVSSGCP CCEEEEEECCCCCHHHHCCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA