| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yfeH [C]
Identifier: 108762330
GI number: 108762330
Start: 4586323
End: 4587321
Strand: Direct
Name: yfeH [C]
Synonym: MXAN_3817
Alternate gene names: 108762330
Gene position: 4586323-4587321 (Clockwise)
Preceding gene: 108760750
Following gene: 108758451
Centisome position: 50.18
GC content: 67.17
Gene sequence:
>999_bases ATGCCCCTTCGTCTCGTGAAACGACTTGCCCGGGACTGGTTCCTGCCGGGGATGTTCGCGGCCGTCATCCTGGCCGCGCT CTTCCCGGAGTTCGGTACGTCGGGCGGACCGATGCACGCGGACGTCGTCGCCGACGTGGGCATCTTCGCGGTGTTCCTGC TCCACGGCCTGGGCCTGCCCGCGGCTCAGCTCCGCGCGGGCGTGGTGACGTGGCGCGTCCACGTGGTGGTCCAGGCCTTC ACATTCGTGGTGTTTCCGCTGCTGTGGTGGCTGGGCGACGTGTTGGTGGGCCGCTGGATGCCAGCGGACCTGTCGCTGGG GCTGCTCTATCTCTGCGCGGTGCCGTCGACCATCTCCTCCTCGGTCGCGATGACAGGCGTCGCCCGAGGCAACGTGCCCG CCGCCATCTTCAACGCCAGCCTGTCCAGCCTGCTGGGCATCGTGTTGACGCCGCTCATCATCGGCCTGTTCGCCAGCGCC ACCGGGCACTCCCTGTCCATGGGCCAGGCCATCCTCAAGCTATCGGCCCTCCTGCTGCTCCCCCTGGCACTGGGGCAATT GCTGCGCCCGCTGGTGGGCGGCTGGTTCGCCCGCTACCGGCCTTACACGAATGCCTTCGACCGGGTGGTGATCCTGGTCC TCGTCTATTCGTCGTTTTGTGACTCGATCGCCTCGGGCCTGTTCTCCGACTACGGCGCGGCGGTGCTCGGCATTGCCTTC GCGGGCGCGGTGCTCATCCTGGCCATCGTGCTGATGCTGACCACGCGGACGGCTCGGGCGCTGGGTTTCTCCAAGGAGGA CGAAATCACGGTGGTCTTCTGTGGGTCGAAGAAGACACTGGCCTCAGGGGTGCCCATGGCGCGGCTGCTCTTCGGCGCCA ATCCCGCACTGGGGCTCATCGTCCTACCGTTGATGTTCTATCACCAGGCCCAGCTCCTCGTGTGCTCGCTCCTGGCGGAA CGCTACGCGAAGCGCCCGGCGGGACAACCTTCCGCGTAG
Upstream 100 bases:
>100_bases ATGGTCAAACATGGCGCCGGCGCCGGCAATGTCTCCACGAGCCCGCCCCGCGCACTCCGCGGTGGAGGTCCGCCGATGCC CGGAGTAAGGGGGGGCAAGC
Downstream 100 bases:
>100_bases GCCTCGGTGCGCATCCCCGGCGGACCGGCACTGTGATAGGTGCGCAAACCACGTATGTCAGAGCCGCACAGAACGTCAGG GGCCTGGCTTGACCCAGCCG
Product: sodium bile acid symporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MPLRLVKRLARDWFLPGMFAAVILAALFPEFGTSGGPMHADVVADVGIFAVFLLHGLGLPAAQLRAGVVTWRVHVVVQAF TFVVFPLLWWLGDVLVGRWMPADLSLGLLYLCAVPSTISSSVAMTGVARGNVPAAIFNASLSSLLGIVLTPLIIGLFASA TGHSLSMGQAILKLSALLLLPLALGQLLRPLVGGWFARYRPYTNAFDRVVILVLVYSSFCDSIASGLFSDYGAAVLGIAF AGAVLILAIVLMLTTRTARALGFSKEDEITVVFCGSKKTLASGVPMARLLFGANPALGLIVLPLMFYHQAQLLVCSLLAE RYAKRPAGQPSA
Sequences:
>Translated_332_residues MPLRLVKRLARDWFLPGMFAAVILAALFPEFGTSGGPMHADVVADVGIFAVFLLHGLGLPAAQLRAGVVTWRVHVVVQAF TFVVFPLLWWLGDVLVGRWMPADLSLGLLYLCAVPSTISSSVAMTGVARGNVPAAIFNASLSSLLGIVLTPLIIGLFASA TGHSLSMGQAILKLSALLLLPLALGQLLRPLVGGWFARYRPYTNAFDRVVILVLVYSSFCDSIASGLFSDYGAAVLGIAF AGAVLILAIVLMLTTRTARALGFSKEDEITVVFCGSKKTLASGVPMARLLFGANPALGLIVLPLMFYHQAQLLVCSLLAE RYAKRPAGQPSA >Mature_331_residues PLRLVKRLARDWFLPGMFAAVILAALFPEFGTSGGPMHADVVADVGIFAVFLLHGLGLPAAQLRAGVVTWRVHVVVQAFT FVVFPLLWWLGDVLVGRWMPADLSLGLLYLCAVPSTISSSVAMTGVARGNVPAAIFNASLSSLLGIVLTPLIIGLFASAT GHSLSMGQAILKLSALLLLPLALGQLLRPLVGGWFARYRPYTNAFDRVVILVLVYSSFCDSIASGLFSDYGAAVLGIAFA GAVLILAIVLMLTTRTARALGFSKEDEITVVFCGSKKTLASGVPMARLLFGANPALGLIVLPLMFYHQAQLLVCSLLAER YAKRPAGQPSA
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yfeH [H]
Homologues:
Organism=Homo sapiens, GI71725371, Length=325, Percent_Identity=31.3846153846154, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI14149785, Length=149, Percent_Identity=32.8859060402685, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI1788749, Length=325, Percent_Identity=40.9230769230769, Blast_Score=204, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6323677, Length=376, Percent_Identity=23.936170212766, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002657 - InterPro: IPR016833 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 35210; Mature: 35078
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRLVKRLARDWFLPGMFAAVILAALFPEFGTSGGPMHADVVADVGIFAVFLLHGLGLP CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC AAQLRAGVVTWRVHVVVQAFTFVVFPLLWWLGDVLVGRWMPADLSLGLLYLCAVPSTISS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH SVAMTGVARGNVPAAIFNASLSSLLGIVLTPLIIGLFASATGHSLSMGQAILKLSALLLL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH PLALGQLLRPLVGGWFARYRPYTNAFDRVVILVLVYSSFCDSIASGLFSDYGAAVLGIAF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAVLILAIVLMLTTRTARALGFSKEDEITVVFCGSKKTLASGVPMARLLFGANPALGLI HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHCCHHHHHHHCCCCHHHHH VLPLMFYHQAQLLVCSLLAERYAKRPAGQPSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PLRLVKRLARDWFLPGMFAAVILAALFPEFGTSGGPMHADVVADVGIFAVFLLHGLGLP CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC AAQLRAGVVTWRVHVVVQAFTFVVFPLLWWLGDVLVGRWMPADLSLGLLYLCAVPSTISS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH SVAMTGVARGNVPAAIFNASLSSLLGIVLTPLIIGLFASATGHSLSMGQAILKLSALLLL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH PLALGQLLRPLVGGWFARYRPYTNAFDRVVILVLVYSSFCDSIASGLFSDYGAAVLGIAF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGAVLILAIVLMLTTRTARALGFSKEDEITVVFCGSKKTLASGVPMARLLFGANPALGLI HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHCCHHHHHHHCCCCHHHHH VLPLMFYHQAQLLVCSLLAERYAKRPAGQPSA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]