| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is thiG
Identifier: 108762312
GI number: 108762312
Start: 3820820
End: 3821605
Strand: Reverse
Name: thiG
Synonym: MXAN_3268
Alternate gene names: 108762312
Gene position: 3821605-3820820 (Counterclockwise)
Preceding gene: 108763282
Following gene: 108760708
Centisome position: 41.81
GC content: 68.45
Gene sequence:
>786_bases ATGAGCATCCAGGACAAGCCTTTCACCATCGCCGGAGTGACGTTCAGCTCCCGGCTCATCCTCGGCACGGGGAAGTATCC CAGCCACGACATCATGAAGCGCTGCCACGAGTCCTCCGGCACGGAGATGGTGACCGTGGCCGTGCGCCGCCTGGACCTCA AGGCCACGGGCGAGGCGTCGCTGATGAACTGGATTGACCGCAACCGCCTGCGCCTGCTCCCCAACACAGCGCTCTGCTAC ACGGCGGATGACGCGGTCCGCACCTGCCGGCTCGCCGAGGAGCTGGGCATGAGCAAGTGGGTGAAGCTCGAGGTGCTCGG CGACGAGAAGACGCTCTACCCGGACGTCGAGGAGACGGTGAAGGCGGCCCGCATCCTGGTGAAGGAGGGCTTCACCGTGC TGCCGTACACCAGCGACGACCCCATCACCGCCCGCAAGCTGGAGGACGCGGGCTGCGCGGCCGTGATGCCGCTGGCGGCG CCCATCGGCAGCGGCCTGGGCATCCGCAATCCGCACAACATCCGCCTCATCCTGGAGACGGTGAAGGTCCCCGTCATCGT GGACGCGGGCGTGGGCACGGCGTCCGACGCGGCCATCGCCATGGAGTTGGGCGTGGAGGCGGTGCTGATGAACACCGCCA TCGCCGGAGCGCAGGACCCGGTGCGCATGGCCGTGGCCATGAAGAAGGCGGTGGAGGCTGGCCGCGACGCGTATCTGGCG GGCCGCATCCCGCGAAAGGCCTACGGCTCCGCGTCCAGCCCGATTGACGGGCTCGTCCACCACTGA
Upstream 100 bases:
>100_bases AGGTGGTGCGCCGCGCCCGCCATCCCGAACACCACCTCCAGGCGGGAGACCGCGTGGAAATCGTCACCTTCGTCGGCGGC GGCTAGCCAGGAGTCCGCAC
Downstream 100 bases:
>100_bases CGGTCGGGGGCGCACGGTGGTGCCTTCAACCGTTCCCCGGCTCGTCGTCATCACCGACTGGCGCCTGCCGTCCGAACGGC TGAGGTGGGCGCTCACCCGG
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSIQDKPFTIAGVTFSSRLILGTGKYPSHDIMKRCHESSGTEMVTVAVRRLDLKATGEASLMNWIDRNRLRLLPNTALCY TADDAVRTCRLAEELGMSKWVKLEVLGDEKTLYPDVEETVKAARILVKEGFTVLPYTSDDPITARKLEDAGCAAVMPLAA PIGSGLGIRNPHNIRLILETVKVPVIVDAGVGTASDAAIAMELGVEAVLMNTAIAGAQDPVRMAVAMKKAVEAGRDAYLA GRIPRKAYGSASSPIDGLVHH
Sequences:
>Translated_261_residues MSIQDKPFTIAGVTFSSRLILGTGKYPSHDIMKRCHESSGTEMVTVAVRRLDLKATGEASLMNWIDRNRLRLLPNTALCY TADDAVRTCRLAEELGMSKWVKLEVLGDEKTLYPDVEETVKAARILVKEGFTVLPYTSDDPITARKLEDAGCAAVMPLAA PIGSGLGIRNPHNIRLILETVKVPVIVDAGVGTASDAAIAMELGVEAVLMNTAIAGAQDPVRMAVAMKKAVEAGRDAYLA GRIPRKAYGSASSPIDGLVHH >Mature_260_residues SIQDKPFTIAGVTFSSRLILGTGKYPSHDIMKRCHESSGTEMVTVAVRRLDLKATGEASLMNWIDRNRLRLLPNTALCYT ADDAVRTCRLAEELGMSKWVKLEVLGDEKTLYPDVEETVKAARILVKEGFTVLPYTSDDPITARKLEDAGCAAVMPLAAP IGSGLGIRNPHNIRLILETVKVPVIVDAGVGTASDAAIAMELGVEAVLMNTAIAGAQDPVRMAVAMKKAVEAGRDAYLAG RIPRKAYGSASSPIDGLVHH
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=250, Percent_Identity=46, Blast_Score=211, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_MYXXD (Q1D7A6)
Other databases:
- EMBL: CP000113 - RefSeq: YP_631467.1 - ProteinModelPortal: Q1D7A6 - SMR: Q1D7A6 - STRING: Q1D7A6 - GeneID: 4106058 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_3268 - TIGR: MXAN_3268 - eggNOG: COG2022 - HOGENOM: HBG296821 - OMA: VAIRRTN - PhylomeDB: Q1D7A6 - ProtClustDB: PRK00208 - BioCyc: MXAN246197:MXAN_3268-MONOMER - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 27997; Mature: 27866
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: ACT_SITE 102-102 BINDING 163-163
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQDKPFTIAGVTFSSRLILGTGKYPSHDIMKRCHESSGTEMVTVAVRRLDLKATGEAS CCCCCCCEEEEEEEEECEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCHH LMNWIDRNRLRLLPNTALCYTADDAVRTCRLAEELGMSKWVKLEVLGDEKTLYPDVEETV HHHHHHCCCEEECCCCEEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHH KAARILVKEGFTVLPYTSDDPITARKLEDAGCAAVMPLAAPIGSGLGIRNPHNIRLILET HHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCEEEEEEE VKVPVIVDAGVGTASDAAIAMELGVEAVLMNTAIAGAQDPVRMAVAMKKAVEAGRDAYLA CCEEEEEECCCCCCCCCEEEEHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEE GRIPRKAYGSASSPIDGLVHH CCCCHHHCCCCCCCCHHHCCC >Mature Secondary Structure SIQDKPFTIAGVTFSSRLILGTGKYPSHDIMKRCHESSGTEMVTVAVRRLDLKATGEAS CCCCCCEEEEEEEEECEEEEECCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCHH LMNWIDRNRLRLLPNTALCYTADDAVRTCRLAEELGMSKWVKLEVLGDEKTLYPDVEETV HHHHHHCCCEEECCCCEEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHH KAARILVKEGFTVLPYTSDDPITARKLEDAGCAAVMPLAAPIGSGLGIRNPHNIRLILET HHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCEEEHHHHHHCCCCCCCCCCCCEEEEEEE VKVPVIVDAGVGTASDAAIAMELGVEAVLMNTAIAGAQDPVRMAVAMKKAVEAGRDAYLA CCEEEEEECCCCCCCCCEEEEHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEE GRIPRKAYGSASSPIDGLVHH CCCCHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA