| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pepA [H]
Identifier: 108762265
GI number: 108762265
Start: 6207583
End: 6209178
Strand: Direct
Name: pepA [H]
Synonym: MXAN_4963
Alternate gene names: 108762265
Gene position: 6207583-6209178 (Clockwise)
Preceding gene: 108763285
Following gene: 108763315
Centisome position: 67.92
GC content: 71.05
Gene sequence:
>1596_bases ATGAACTTCAGCTTCGTCTCCGGCGATGCCACACGGACGAGCGGCGACCTGCTCGTCATTCCCCTCTTCGAGGGCGAGCT GGGAGACAGCGCCCCGTCCTCCCTCTCCTCGGCGGATGGCGCCCTGGAAGGACGCCTGCGCGGCGCCGCCACCCAGGAGG GCTTCAAGGGACGCGCGGACCAGAGCCTGGTGATGCACACCCTGGGGCGCACGTCGTCCGAGCGCGTGCTGCTGCTGGGC CTGGGAAACCGCGCCCGCTTCCACCCGGAAGTGCTGCGGCTGGCCGCCGGCCGCGCCGCGAAGACGGCGCAGCGGCTCAA GGTCACCTCGGTGGCGTTCGCCCTGCCGGCCACCGAGTCCACGCAGGACGCGGTGCGCGCCGTGGTGGAAGGCGTGGCGC TGGGCGTCTACCGCTTCGACAAGTACAAGTCCTCCGCGCGCGAGGAGAAGAAGGGCGCCGCGAAGCTGGGCAAGGTGTCC CTGCTGCTCCCCGAGGGCACGGAGCGCACGCGCGAGCTCGATGCCGCGCTGACGCTGGCGCAGCGCGTCGCGGAGGCGAC CAACTGGGCCCGTGACCTCGTCAACGAGCCGCCCAACGCGGTGACGCCCACGGTGCTGGCCGAGGCCGCGCGTCAGGCCG CGAAGGAAGGCGGGCTGAAGGCCACCATCGGCGGCCGCCGCGACATCGAGAAGCTCGACATGGGCATGTTCCTCGGCGTC ACCGCGGGGAGCACCGAGGAGCCTCGCCTCATCCACCTGACGTACATGCCCAAGAACGCGCGCGACGCCAAACAGCCGCC GCTGGCGCTGGTGGGCAAGGCCGTCACCTTCGACTCGGGCGGCCTGTCGCTCAAGCCGACGGACGGCATGGTGGACATGA AGACGGACATGGCGGGCTCGGCCGCGGTGCTGGGCGCCATGAAGGTCATCGCCGCGCTCAAGCCGCCCTTCCCCGTGCAC GCCTTCATCGGCGCGTGCGAGAACATGCCGGCCGGCAACGCCTACAAGCCGGGTGACATCCTCACCTCGCGCCTGGGCAA GACGGTGGAGATCACCAACACGGACGCGGAAGGCCGCCTGGTGCTGGGCGACATCCTGACGTGGGCCACCGAGCACAAGC CGGCCGCCATCATCGACCTGGCCACGCTCACGGGCGCCTGCATCGTCGCGCTGGGCAACTACATCGTCGGCGCCTTCGGC GACCACGAGGAGACGGTGACGCAGGTGCTCCAGGCCGCGCGCACCGCGGGCGAGGAGATGTGGCGCATGCCCATCAGCGA CATGCAGAAGGACGCCCTGCGCTCCGAGGTCGCCGACATGAAGAACTCCGGCGAGCGCTGGGGTGGCTCCATCAACGCCG CCATCTTCCTCCGCGAGTTCGTGGGCGAGACGCCGTGGGTGCACCTGGACATCGCGGGTCCGGCGAGCAGCCCCAAGGAG CGTGGCTACCTGAGCAAGGGCGGCACCGGCGTGGGCGTGCGCACCCTGGTGGAGTACGTCCGCCTGCGCGCGCAGACGCA GGACACCGCGCCCGCAGAAGCAGCGCCCGAGGCCAAGGCCAGCAAGGCCAAGCCGGCCCGGAAGCGCGCGAAGTAG
Upstream 100 bases:
>100_bases CGAATGAAATCCAACGCTTTGCGTGTAACAGGGCGGGCGTTACAGTCCGCGCCCTTTCCACCAGCCCAAGCCTTTTCACT GTTCAGGAGTTCCACGGCCC
Downstream 100 bases:
>100_bases CTCGGCTTCCAGCCAGAGGGCGTCCCTGATGAAGGGGCGCCCTCAGCGCTGGGGCACCTTCCACGCCGTCGCCGGCCCCG CAAGCGGGCGGACGCCCTGG
Product: cytosol aminopeptidase family protein
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MNFSFVSGDATRTSGDLLVIPLFEGELGDSAPSSLSSADGALEGRLRGAATQEGFKGRADQSLVMHTLGRTSSERVLLLG LGNRARFHPEVLRLAAGRAAKTAQRLKVTSVAFALPATESTQDAVRAVVEGVALGVYRFDKYKSSAREEKKGAAKLGKVS LLLPEGTERTRELDAALTLAQRVAEATNWARDLVNEPPNAVTPTVLAEAARQAAKEGGLKATIGGRRDIEKLDMGMFLGV TAGSTEEPRLIHLTYMPKNARDAKQPPLALVGKAVTFDSGGLSLKPTDGMVDMKTDMAGSAAVLGAMKVIAALKPPFPVH AFIGACENMPAGNAYKPGDILTSRLGKTVEITNTDAEGRLVLGDILTWATEHKPAAIIDLATLTGACIVALGNYIVGAFG DHEETVTQVLQAARTAGEEMWRMPISDMQKDALRSEVADMKNSGERWGGSINAAIFLREFVGETPWVHLDIAGPASSPKE RGYLSKGGTGVGVRTLVEYVRLRAQTQDTAPAEAAPEAKASKAKPARKRAK
Sequences:
>Translated_531_residues MNFSFVSGDATRTSGDLLVIPLFEGELGDSAPSSLSSADGALEGRLRGAATQEGFKGRADQSLVMHTLGRTSSERVLLLG LGNRARFHPEVLRLAAGRAAKTAQRLKVTSVAFALPATESTQDAVRAVVEGVALGVYRFDKYKSSAREEKKGAAKLGKVS LLLPEGTERTRELDAALTLAQRVAEATNWARDLVNEPPNAVTPTVLAEAARQAAKEGGLKATIGGRRDIEKLDMGMFLGV TAGSTEEPRLIHLTYMPKNARDAKQPPLALVGKAVTFDSGGLSLKPTDGMVDMKTDMAGSAAVLGAMKVIAALKPPFPVH AFIGACENMPAGNAYKPGDILTSRLGKTVEITNTDAEGRLVLGDILTWATEHKPAAIIDLATLTGACIVALGNYIVGAFG DHEETVTQVLQAARTAGEEMWRMPISDMQKDALRSEVADMKNSGERWGGSINAAIFLREFVGETPWVHLDIAGPASSPKE RGYLSKGGTGVGVRTLVEYVRLRAQTQDTAPAEAAPEAKASKAKPARKRAK >Mature_531_residues MNFSFVSGDATRTSGDLLVIPLFEGELGDSAPSSLSSADGALEGRLRGAATQEGFKGRADQSLVMHTLGRTSSERVLLLG LGNRARFHPEVLRLAAGRAAKTAQRLKVTSVAFALPATESTQDAVRAVVEGVALGVYRFDKYKSSAREEKKGAAKLGKVS LLLPEGTERTRELDAALTLAQRVAEATNWARDLVNEPPNAVTPTVLAEAARQAAKEGGLKATIGGRRDIEKLDMGMFLGV TAGSTEEPRLIHLTYMPKNARDAKQPPLALVGKAVTFDSGGLSLKPTDGMVDMKTDMAGSAAVLGAMKVIAALKPPFPVH AFIGACENMPAGNAYKPGDILTSRLGKTVEITNTDAEGRLVLGDILTWATEHKPAAIIDLATLTGACIVALGNYIVGAFG DHEETVTQVLQAARTAGEEMWRMPISDMQKDALRSEVADMKNSGERWGGSINAAIFLREFVGETPWVHLDIAGPASSPKE RGYLSKGGTGVGVRTLVEYVRLRAQTQDTAPAEAAPEAKASKAKPARKRAK
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=509, Percent_Identity=35.1669941060904, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI47155554, Length=329, Percent_Identity=36.4741641337386, Blast_Score=142, Evalue=6e-34, Organism=Escherichia coli, GI1790710, Length=511, Percent_Identity=36.0078277886497, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI87082123, Length=341, Percent_Identity=37.5366568914956, Blast_Score=180, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17556903, Length=292, Percent_Identity=34.5890410958904, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17565172, Length=351, Percent_Identity=30.1994301994302, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI20129969, Length=522, Percent_Identity=31.4176245210728, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24661038, Length=385, Percent_Identity=31.6883116883117, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI21355725, Length=333, Percent_Identity=34.2342342342342, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI21355645, Length=517, Percent_Identity=28.4332688588008, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24662223, Length=517, Percent_Identity=28.4332688588008, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24662227, Length=417, Percent_Identity=30.9352517985612, Blast_Score=178, Evalue=7e-45, Organism=Drosophila melanogaster, GI161077148, Length=482, Percent_Identity=29.8755186721992, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI20130057, Length=482, Percent_Identity=29.8755186721992, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI20129963, Length=414, Percent_Identity=32.1256038647343, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI19922386, Length=376, Percent_Identity=29.5212765957447, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI21357381, Length=335, Percent_Identity=33.7313432835821, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI221379063, Length=335, Percent_Identity=33.7313432835821, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI221379062, Length=335, Percent_Identity=33.7313432835821, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI24646701, Length=257, Percent_Identity=31.5175097276265, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24646703, Length=257, Percent_Identity=31.5175097276265, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI21358201, Length=257, Percent_Identity=31.5175097276265, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 56220; Mature: 56220
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFSFVSGDATRTSGDLLVIPLFEGELGDSAPSSLSSADGALEGRLRGAATQEGFKGRAD CCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCC QSLVMHTLGRTSSERVLLLGLGNRARFHPEVLRLAAGRAAKTAQRLKVTSVAFALPATES HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCC TQDAVRAVVEGVALGVYRFDKYKSSAREEKKGAAKLGKVSLLLPEGTERTRELDAALTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH QRVAEATNWARDLVNEPPNAVTPTVLAEAARQAAKEGGLKATIGGRRDIEKLDMGMFLGV HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHCCCEEEEE TAGSTEEPRLIHLTYMPKNARDAKQPPLALVGKAVTFDSGGLSLKPTDGMVDMKTDMAGS ECCCCCCCEEEEEEECCCCCCCCCCCCHHHHEEEEEECCCCCEECCCCCCEEECCCCCCH AAVLGAMKVIAALKPPFPVHAFIGACENMPAGNAYKPGDILTSRLGKTVEITNTDAEGRL HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCE VLGDILTWATEHKPAAIIDLATLTGACIVALGNYIVGAFGDHEETVTQVLQAARTAGEEM EEHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH WRMPISDMQKDALRSEVADMKNSGERWGGSINAAIFLREFVGETPWVHLDIAGPASSPKE HCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHH RGYLSKGGTGVGVRTLVEYVRLRAQTQDTAPAEAAPEAKASKAKPARKRAK CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHCCC >Mature Secondary Structure MNFSFVSGDATRTSGDLLVIPLFEGELGDSAPSSLSSADGALEGRLRGAATQEGFKGRAD CCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCC QSLVMHTLGRTSSERVLLLGLGNRARFHPEVLRLAAGRAAKTAQRLKVTSVAFALPATES HHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCC TQDAVRAVVEGVALGVYRFDKYKSSAREEKKGAAKLGKVSLLLPEGTERTRELDAALTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH QRVAEATNWARDLVNEPPNAVTPTVLAEAARQAAKEGGLKATIGGRRDIEKLDMGMFLGV HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHCCCEEEEE TAGSTEEPRLIHLTYMPKNARDAKQPPLALVGKAVTFDSGGLSLKPTDGMVDMKTDMAGS ECCCCCCCEEEEEEECCCCCCCCCCCCHHHHEEEEEECCCCCEECCCCCCEEECCCCCCH AAVLGAMKVIAALKPPFPVHAFIGACENMPAGNAYKPGDILTSRLGKTVEITNTDAEGRL HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCE VLGDILTWATEHKPAAIIDLATLTGACIVALGNYIVGAFGDHEETVTQVLQAARTAGEEM EEHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHH WRMPISDMQKDALRSEVADMKNSGERWGGSINAAIFLREFVGETPWVHLDIAGPASSPKE HCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHH RGYLSKGGTGVGVRTLVEYVRLRAQTQDTAPAEAAPEAKASKAKPARKRAK CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA