| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yojK [H]
Identifier: 108762157
GI number: 108762157
Start: 353802
End: 354995
Strand: Reverse
Name: yojK [H]
Synonym: MXAN_0300
Alternate gene names: 108762157
Gene position: 354995-353802 (Counterclockwise)
Preceding gene: 108762985
Following gene: 108757047
Centisome position: 3.88
GC content: 68.68
Gene sequence:
>1194_bases ATGTCCCGAATCCTGATTGCCACCTCCCCCGAGAAGGGCCACCTCAACCCCATGGCCGGTGTCGCGCAGTGGATGCGCCG CATGGGCCACCACGTGGGCTGGCTGTGCATCCCCGAGCCCGCGCCGCAGCTCGAACGGCTGGGCGTGGAGGTGCTGACGT TGCCCCACGCCGAGGCGCCCGTGCCCGCCATCGAGACGGGAGGCGAGGCGCTCGCGCGGTTGGTGCTCGATGAAGCGGCG CTGGGGCAATGGATTCGCGGCCTGCTGATTGACGCCGTGCCCTCGCTGCTGGCGCCGGTGCGAGAGGCCGTCGAGCGCTT CCGTCCGGATGTCATGGCCCTGGACGGCATGCAGTACGCCGCCGTGCTGGCCGCCCATGCGTTGCGAATCCCCTGGGCGG GCGTGTCCTCCGCGCTGTCATTGCTGGAGCCGCCCATCGATTACGGCCTGCGCCGCAACGTGCGCGCGCTGGCCGATGAG CGACAGGCTCTGTTTTCCCGCCACGGCTTCGATGCCCGCTTCCGCAACTGTGAGTGCCTGTCACCGGACCTCAACGTCAT CTTCGCCACCGAGGCCTTCCTGGGCTCCGACGCAGGACTGCCTCCCGCCACACACCTGGTCGGGCCGTCACAGCCTCCGG AGGCGCGCGGTGACGAGGTGGACTTCCCGTGGGAGCGGCTGGGCTCCAAGCCCGTGGTGTACGTGTCTTTCGGCAGCCAG ATTTCGTGGCAACCCGATTTGTTTCAGACGATGACCGAGGCCGCCGCGCCCCTGGGCGTCACCGTGGTGCTCAGCGCGGG TGAGTTGGCTGATACAGATTTTGTTCACAGCCTTCCCGGGGACGTGGTCGCCGTGCCATACACACCTCAGCGACAACTGT TATCACGAGTCTCCGTGCTCGTGTCTCACGGCGGCGCCAACTCCGTCATGGAGGCGCTGACCGAAGGCGTTCCGATGCTG CTCCTGCCTGTCTGCAACGACCAGCCCATCCAGGCGCACTTCCTGGCGAAGTCGGGCGCGGGGCTCGTGCGGGCGCCGCG CTCGCTCTCCGTGGAGGACTGCCGCGAAGCGCTGCGACAACTGCTGGAGCCGGGCACGGTGCTGCGACAGCGGGTGGCCG GCATCGCCGCGTCCTACCAGGCGCGTGACGGCGCGAAGGACGCCGCTGAACGCATCCTCCGACTCGTGGCGTGA
Upstream 100 bases:
>100_bases GTCTGGCCGCCGACGCTCCCGAGGCGAGTGCCATGGACCGGCTGTTGATGCGGTTGTGCTCCCTCGCCATGCTCCACGCC CACGCCAGCGCCCGCCCCCC
Downstream 100 bases:
>100_bases GTGATTGCATGCGTGATTGGGACGTGTGGCGTCTGGTGCTACCGGGTGTGTCGCCGCTGGAGGTGTGGAACCTGCCCGTG ATGGGTCGCGAGCTGTGGGA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSRILIATSPEKGHLNPMAGVAQWMRRMGHHVGWLCIPEPAPQLERLGVEVLTLPHAEAPVPAIETGGEALARLVLDEAA LGQWIRGLLIDAVPSLLAPVREAVERFRPDVMALDGMQYAAVLAAHALRIPWAGVSSALSLLEPPIDYGLRRNVRALADE RQALFSRHGFDARFRNCECLSPDLNVIFATEAFLGSDAGLPPATHLVGPSQPPEARGDEVDFPWERLGSKPVVYVSFGSQ ISWQPDLFQTMTEAAAPLGVTVVLSAGELADTDFVHSLPGDVVAVPYTPQRQLLSRVSVLVSHGGANSVMEALTEGVPML LLPVCNDQPIQAHFLAKSGAGLVRAPRSLSVEDCREALRQLLEPGTVLRQRVAGIAASYQARDGAKDAAERILRLVA
Sequences:
>Translated_397_residues MSRILIATSPEKGHLNPMAGVAQWMRRMGHHVGWLCIPEPAPQLERLGVEVLTLPHAEAPVPAIETGGEALARLVLDEAA LGQWIRGLLIDAVPSLLAPVREAVERFRPDVMALDGMQYAAVLAAHALRIPWAGVSSALSLLEPPIDYGLRRNVRALADE RQALFSRHGFDARFRNCECLSPDLNVIFATEAFLGSDAGLPPATHLVGPSQPPEARGDEVDFPWERLGSKPVVYVSFGSQ ISWQPDLFQTMTEAAAPLGVTVVLSAGELADTDFVHSLPGDVVAVPYTPQRQLLSRVSVLVSHGGANSVMEALTEGVPML LLPVCNDQPIQAHFLAKSGAGLVRAPRSLSVEDCREALRQLLEPGTVLRQRVAGIAASYQARDGAKDAAERILRLVA >Mature_396_residues SRILIATSPEKGHLNPMAGVAQWMRRMGHHVGWLCIPEPAPQLERLGVEVLTLPHAEAPVPAIETGGEALARLVLDEAAL GQWIRGLLIDAVPSLLAPVREAVERFRPDVMALDGMQYAAVLAAHALRIPWAGVSSALSLLEPPIDYGLRRNVRALADER QALFSRHGFDARFRNCECLSPDLNVIFATEAFLGSDAGLPPATHLVGPSQPPEARGDEVDFPWERLGSKPVVYVSFGSQI SWQPDLFQTMTEAAAPLGVTVVLSAGELADTDFVHSLPGDVVAVPYTPQRQLLSRVSVLVSHGGANSVMEALTEGVPMLL LPVCNDQPIQAHFLAKSGAGLVRAPRSLSVEDCREALRQLLEPGTVLRQRVAGIAASYQARDGAKDAAERILRLVA
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glycosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002213 - InterPro: IPR006326 [H]
Pfam domain/function: PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 42715; Mature: 42583
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRILIATSPEKGHLNPMAGVAQWMRRMGHHVGWLCIPEPAPQLERLGVEVLTLPHAEAP CCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCEEEECCCCCCC VPAIETGGEALARLVLDEAALGQWIRGLLIDAVPSLLAPVREAVERFRPDVMALDGMQYA CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHH AVLAAHALRIPWAGVSSALSLLEPPIDYGLRRNVRALADERQALFSRHGFDARFRNCECL HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC SPDLNVIFATEAFLGSDAGLPPATHLVGPSQPPEARGDEVDFPWERLGSKPVVYVSFGSQ CCCCCEEEEEHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCC ISWQPDLFQTMTEAAAPLGVTVVLSAGELADTDFVHSLPGDVVAVPYTPQRQLLSRVSVL CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHH VSHGGANSVMEALTEGVPMLLLPVCNDQPIQAHFLAKSGAGLVRAPRSLSVEDCREALRQ HHCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCEECCCCCCHHHHHHHHHH LLEPGTVLRQRVAGIAASYQARDGAKDAAERILRLVA HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC >Mature Secondary Structure SRILIATSPEKGHLNPMAGVAQWMRRMGHHVGWLCIPEPAPQLERLGVEVLTLPHAEAP CEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCEEEECCCCCCC VPAIETGGEALARLVLDEAALGQWIRGLLIDAVPSLLAPVREAVERFRPDVMALDGMQYA CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHH AVLAAHALRIPWAGVSSALSLLEPPIDYGLRRNVRALADERQALFSRHGFDARFRNCECL HHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEC SPDLNVIFATEAFLGSDAGLPPATHLVGPSQPPEARGDEVDFPWERLGSKPVVYVSFGSQ CCCCCEEEEEHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCC ISWQPDLFQTMTEAAAPLGVTVVLSAGELADTDFVHSLPGDVVAVPYTPQRQLLSRVSVL CCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHH VSHGGANSVMEALTEGVPMLLLPVCNDQPIQAHFLAKSGAGLVRAPRSLSVEDCREALRQ HHCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCEECCCCCCHHHHHHHHHH LLEPGTVLRQRVAGIAASYQARDGAKDAAERILRLVA HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]